4E8B,5VM8,5O95,1VHK,4J3C


Conserved Protein Domain Family
RsmE

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COG1385: RsmE 
16S rRNA U1498 N3-methylase RsmE [Translation, ribosomal structure and biogenesis]
16S rRNA U1498 N3-methylase RsmE is part of the Pathway/BioSystem: 16S rRNA modification
Statistics
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PSSM-Id: 440995
Aligned: 800 rows
Threshold Bit Score: 95.9917
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4E8B_A         1 MR-----------IPRIYH-PEP---LTSHSHIAL-CEDAANHIGRVLRMGPGQALQLFDGSN-QVFDAEITSa--SKKS 61 
WP_012422127   1 -------------MKQIVL-DDSc--LFDNDIIID-DVKIYHYLVDVRRVKLGDTLNVLLRGR-EIRFAEIIGi--NNNL 60 
NP_212492      1 -------------MKQIVL-DENc--LAGNFIIVK-DAKIYHHLVNVRRLKKGDKLNILLKDK-ELRASEIVKi--GSNF 60 
WP_014270542   1 -------------MRQYLLgP-S---FSGQTTFTV-SKKESQYLTRVLRIKEGQCFAGIDRNG-TIWDLQMESv--GKES 59 
WP_014245491   1 -------------MNSICFfKEE---LiNQDSISFsDEKRLGHLHTHLDSKEGDLITITi-iGqGIYKAEIIKl--NNLT 61 
NP_972481      1 -------------MKLLIV-SAE---PDK-DIIRL-DKKDYNYLVSVRRIKEGQVLKISLNGV-KPASAEVFKintEKKY 60 
WP_013043570   1 -------------MNLMLF---Ev-pF-EQMTLAG-DDPRAEHLRKVLRVRVGALVFVGfiGA-ERARAEVVSl-gDDGS 59 
WP_102242241   1 -------------MNSLIL--K------NTDGVIT-DPKVLAHMHETLKAKAGDTFKCTa-lGqGLCQGKIIEl--AKDK 55 
WP_013252772   1 -------------MRTFVL-DDSetkLASGKRFSP-APERAHYLLRVLRLSQGAVFPGQDSRG-KRYLITLES----ETP 60 
WP_010881725   3 LShsvrraqrvdiMKQLLI-TAE---PDSGGYVQL-SGKDFHYMVRVRRARVGDTFTLRTQAG-AQYSAVVSAldiHTRS 76 
4E8B_A        62 VEVKVL--EGQi--DDRE-----SP-------------LHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKL 119
WP_012422127  61 IRLSTLkiekl-----------------------ktrdFEISMFISNLKGRKLDLSLRQIVEIGVDQINIVNADNSVARI 117
NP_212492     61 IKFTTNkidki-----------------------eknnFEISIFISSLKGRKIDLVLRQVVEIGVSEINIINADRSVSKI 117
WP_014270542  60 CTLSCQ--KAAe-gKAKQttdsmPSygg--------pfPRIFLYQCICKGKKIEQIVRQATEIGVEEITLVQSRYCVSDF 128
WP_014245491  62 CEIKVK--EQL---K--S-----LS-------------QWFHLLVGLSRPQTIKKVLEHSTTLGAKSIHLFKALLSEKSY 116
NP_972481     61 IELRLLkeEFAfdaEPYK-----PR-------------AEIILMQWLIKGNHMDIAVRQAAEAGCSLIVPVLGEFSVVKK 122
WP_013043570  60 IELKII----Ar--EPAP-----TP-------------LPIDLLIGLPRPHTAKRILFEAASLGVNRLMFFEAERGEPSY 115
WP_102242241  56 CLLEL---SPL---TNA------HP-------------QWFNLVVGISRPQTSKKILEHATTFGAKNIHFFKAALSEKSY 110
WP_013252772  61 CTLS-L--RREeeaSARE-----VEacfrelpeqgpdfPPIIFYQAILKGKKMDQVIRQATEAGADFIIPVLTDRSVPQF 132
WP_010881725  77 LILHCT----PmppVDEK-----TQ-------------VTLVLLQWMPRARVFDAIVRHATELGTARIIPIRGERSLIRD 134
4E8B_A       120 dse---rlnKKLQQWQKIAIAACEQCGRN-RVPEIRP-AM--D-LEAWCAE-----Q------D-EGlKLNLHPr--A-S 176
WP_012422127 118 emd---dlkFKSSRFAKLIDEALKQSGNT-QVPSINF-YR--N-FFSi--------Py-----S-PSvSYYVAHkdgV-L 174
NP_212492    118 din---nasAKILRFSKIIDEALKQSGNK-IVPKINF-YN--N-FFYl--------Py-----SfCTtRYYVAHpsgM-I 175
WP_014270542 129 snktektvsVRGERLEAQIKEAIQQSGSP-IATHIGEkTI--K-LEDLPKHw----N------D-RGlAIFFHQseiSqQ 193
WP_014245491 117 sqs----siYRDENYKSYLIDGLAQSKTYfELPEFSL-KNylN-LDQYKAH-----K------N----KFYLSLn--T-E 172
NP_972481    123 en------iNQTERRERIIREARQQSGSV-VNTKILP-AQ--E-LKAALDSvldytA------NrKTaFIMLSEkkvG-S 184
WP_013043570 116 ars----rlWQTNEWRERLRLGAEQSFGT-HVPDVLM-LP--D-LQTALNEl----Ys-------APlRVALDNy-eA-Q 173
WP_102242241 111 lds----kvFEPHECEEYLLAGLSQSAIYgELPGVKV-DKy-NpADHYKNE-----P------Q----KFILDLs--G-K 166
WP_013252772 133 tpg---eaeKKQKRWEIIVREAIQQSGAT-GTTLL---------LPRSLKKviedpPmprpqgGgREvKLFFHErpiA-N 198
WP_010881725 135 ek------dTQHARLQRIVREARQQSGSA-VNTRVDT-LH--S-LLGALHMleqefP------YpSAvRIYCSEkhvG-G 196
4E8B_A       177 NSi---nTLp-------------------------LPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTA 228
WP_012422127 175 LSc---gNDisa-------------------------sgKIGILIGPEGCFSKSEIDFFKKLNFQFVRFNTPILRADTAI 226
NP_212492    176 LSk---nESfdn-------------------------fgKIGIIIGPEGCFSESEIVFFKEKGFNFVRFNTPILRADTAI 227
WP_014270542 194 TSl---gKLle----------------------tvPISTPIAVIIGSEGGFSDEECLFLETSGFKPVLLKTNILRAETAA 248
WP_014245491 173 QTf---kELs------------------------pGERDEPLLAIGPERGWTRAEEEKLKEAGFSPIKISHSTLRVEHAI 225
NP_972481    185 FSf---fDCl------------------------sAETEAIVLAIGCEGGIGSKEIEFLKEHKFEEVHFNTNVLRAETAA 237
WP_013043570 174 GAl---tGEl------------------------aRAEDSAALALGPERGWSSNERDALRKNGWTLAHLGPHVMRAETAC 226
WP_102242241 167 ENfldlkESi-------------------------nFDTAITLAIGPERGFIPEDIERFHQAGFKSVKISSSILRVEHAI 221
WP_013252772 199 GSl---hGYlsge------------------------issITAAVGPEGGFSPKESEMFLQAGFCPLFFSGNILRAETAA 251
WP_010881725 197 -Sf---hELlwtgrsthctahrtptepnaphntpdVRAQAVILAVGAEGGFSDTEERTLHDAHFAPLHFRTNVLRVETAA 272
4E8B_A       229 LTAITALQVRFGDL 242
WP_012422127 227 VYSLVHFKLLLEGN 240
NP_212492    228 IYSLAYFKALLEDY 241
WP_014270542 249 TYAISAIQVLLTEK 262
WP_014245491 226 YTSVGQLEMFrV-- 237
NP_972481    238 IYSIAAAQVIMEEK 251
WP_013043570 227 TAAVAVVASACGFW 240
WP_102242241 222 YSAVSQLELIrGRY 235
WP_013252772 252 IYGLAAIRALVAER 265
WP_010881725 273 LYALAGAHLLLSEA 286
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