3QUX


Conserved Protein Domain Family
MHC_I_3

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pfam16497: MHC_I_3 
MHC-I family domain
Statistics
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PSSM-Id: 465144
Aligned: 13 rows
Threshold Bit Score: 297.746
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3QUX_A         1 SEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSaTISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRD 80   house mouse
EGW04052      19 WEDQLKNYPLRCLQISSFPNSSSFRTDGLAWLGDVQTHSWRNAS-TVSFLKPWSHGKLSDQQWQTLEHILQVYRTSFTRD 97  
AEO72063      19 SEVPQRNFPFRCLQISSFLNRSWARTDALAWLGELQPYVWKNDSdTIRFLKPWSQGTFSDQQCEELQHLFRVYRSSVTRD 98  
O62848        19 FEAPQTSFPFRFLQISSFANHSWTRTDGLMWLGELQPYTWRNESsTIRFLKHWSQGTFSDQQWEQLQHTFQVYRSSFTRD 98   sheep
XP_011768257  19 AEVPQRLFPLRCLQISSFANSNWTRTDGLAWLGELQTHSWSNDSdTIRSLKPWSQGTFSDQQWEALQRVFRVYRSSFTRD 98  
XP_023372205 139 PEGPQRSISFRCLQISSFSNSSQVRTDGSAWLGELQTHSWVDSSdAFRFLKPWSQSGFSDQQWERLQHIFRVYRISFTRE 218 
XP_004775851  19 EDAVQEPISFQITLTVSFYNRSWTQSLGSAWLDEIQTHGWDNKTgAFIFLWPWSKGNWSNVELIKLEKLLYAYFIGLRQV 98  
XP_006082480  19 EDAFQEEISFKIIQSISFYNRSWVKSQNSAWLGDLKTHGWDNNSgRIIFLRPWSKGNLSKKELKELEEYSHKFSTEMPNK 98  
XP_006082803  19 EDAFQEEISFKMIHSSSFYNDSWVKIRYSAWLGDLQTHGWDINSgRIIFLRPWSKGNLGKEEIKELEEFFRAFSIEMPHE 98  
BAF38758      19 EEGFQEPISFQIIWISSFYNRSWEEEVCSAWLGELQTHRREGKSdIVIYRQPWSKGNFSREDLMESEHILRMFFVRFVQA 98  
XP_014384375  34 DTAFQEQISFHMIHISSFYNHSWTQNWGSGWLGELQILGWNSNSgSVIFLRPWSKGNFSNKEITEMEKFFRRLHIELPPL 113  Brandt's bat
XP_005640972  19 edDSQEPVSFRVIRTSSLYNRSWTQNQGSVWLDDVQIHAWDNKNrTFVFRWPWAQGDLSNEERMEADQLFYSNYIFYNLV 98   dog
XP_014305127  30 lpAPQSSARLLFLQISPFANSSWTRTDGSFWLGALQTHSWSNGLd-IHFLRPWSQGKLSDHQWEQLQQVFWVYRSSFNRE 108  little brown bat
3QUX_A        81 IQELVKMMspKEDYPIEIQLSAGCEMYPGNA-SESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSAT 159  house mouse
EGW04052      98 IQELVKMLp-IIHYPIEMQVSAGCEVHSGNT-SENFFNVASQGQHILSFQGTSFQKAPDAPPWTELAIKVLNTDQGTRET 175 
AEO72063      99 IQEFAKML--HIAYPLEVQVSAGCEVHPGNT-SESFLYAAFQGRDILSFQGTSWVPAPDTPQWVARVIEVLNDDQGTREM 175 
O62848        99 IREFVKML--PGDYPFEIQISGGCELLPRNI-SESFLRAALQEKDVLSFQGMSWVSAPDAPPWSQVVCKVLNEDQGTKET 175  sheep
XP_011768257  99 VKEFAKML--RLAYPMELQVSAGCEVHPGNA-SHNFFHVAFQGSDILSFQGTSWEPAQEAPLWVNLAIQVLNQDKWTKET 175 
XP_023372205 219 VQKFVKKL--QVAYPVEIQLSAGCEVRPGNAsSANFLHVAFQGSDFLSFQGTSWEPAPQVPDWGNWVIGELNKDQGTRET 296 
XP_004775851  99 FQDHVRHW--HLEYPFQIQLAEGCELHFGEA-SVGFVKFAYQGADLTSFQNTTWWPSPKGGSRAQEVCKRFNQYHVLNEE 175 
XP_006082480  99 FHRHANQW--QLKYPFEIQITRGCELHPGGP-TVAFYRYAYQGSEVMHFQNNSWLPSPKGGTRAQDMCKLYNQYVVITNI 175 
XP_006082803  99 LHRHASEW--KFKYPFEIQIRMGCELHPGGA-IVDFYGFAYQGSELLHFQNNSWLPSPKGGTRAQDMCRRFNQYLVVKNV 175 
BAF38758      99 FFNHASQW--KLEYPFDVQIAGGCDLYHGET-SVGFVRIAYQGSDFASFQKNSWLPSPKGGTRAQLVCKLFNLYQGTLEI 175 
XP_014384375 114 IRKHASEW--KFEYPFEVQITGGCELHPGEG-KVVFLQFAYQGSELLTFQNNAWLPSSKGDNRAQEMCRLFNQRRVVNII 190  Brandt's bat
XP_005640972  99 YHDHVSQW--QLEYPFQVQMEIGCELRIGEP-FSGFMRYAYQGTDLIRFQNTSWRPSPKGGSRAQQASSVFNQYHEDNEF 175  dog
XP_014305127 109 IREFAKML--HLDYPFVVQVSAGCEVHPGSP-LKSFFHSAFQGSDILSFQETSWVPAPDAPHGTEMISNVLNKDQYIKDT 185  little brown bat
3QUX_A       160 VQMLLNDTCPLFVRGLLEAGKSD 182  house mouse
EGW04052     176 IQQLLNDTCPQVLYGLLEAGKAE 198 
AEO72063     176 VQSLLNDTCPQFVRGLLETGKSE 198 
O62848       176 VHWLLHDICPELVKGLMQTGKSE 198  sheep
XP_011768257 176 VQWLLNDTCPQFVSGLLESGKSE 198 
XP_023372205 297 VQWLLSDICPQLAGALLEAGASE 319 
XP_004775851 176 IHTFFSDTCPKFLLGLLDAGKAD 198 
XP_006082480 176 VQRILSDTCPRFLLSILDAGKAD 198 
XP_006082803 176 VQRILSDTCPRFLLSIPEAGKAD 198 
BAF38758     176 IHKLLSDTCPRFVLGLLDAGKAD 198 
XP_014384375 191 IQRLLWDTCPRFLLGLFDAGKAD 213  Brandt's bat
XP_005640972 176 THELITGYCPRYVLSLLDVGKAD 198  dog
XP_014305127 186 LEWLLNDICPQLVTGLLEAGQQD 208  little brown bat
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