Conserved Protein Domain Family
HemV-2

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cd01147: HemV-2 
Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Statistics
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PSSM-Id: 238567
Aligned: 24 rows
Threshold Bit Score: 214.121
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative metal
Feature 1:putative metal binding site [ion binding site]
Evidence:
  • Comment:based on sequence similarity to PsaA from Streptococcus pneumoniae
  • Citation:PMID 9862808

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                              #        
NP_228004    34 IPSNVNRIVAVGPGALRLIAYlk-atDMVVGVEDfek----------lrpYGRPYil---------ayPELKKLPSVGpg 93  Thermotoga maritima
NP_907315    32 IPLEVSKAFAASPPMMTLLYIla--pEKMMGVNYsf------------seQEKRFm-----------rREVQNLPVLGgf 86  Wolinella succin...
ZP_00076932   1 MPVNIERVATVSDVLVEEMMVilgvnDTLVGLGSkglqyeg--dfsyptdNGTNVtvsggkhvaltlsPDLKNLPLVMd- 77  Methanosarcina b...
NP_616069    58 VPKNITRAAVISDGFVECVMIslgvqDTIVAVGTtitndyt---yvfpsaKGENFtyengkntmlyldPSLSDTVRLTpq 134 Methanosarcina a...
NP_616775   112 VALPVENIIPTDYRTTETLLAlg-tgDMIVGVDRa--------------fHERMSe------------FGLTELPEVAm- 163 Methanosarcina a...
NP_603207    23 LEKPLTKVVVASRYNNELIRAig-siKNVISVDDnt-------------aQDRVYw------------KDFDPKNSIGk- 75  Fusobacterium nu...
ZP_00079102  78 VPKDIQRIATIDDGFVEGVLTnlsevDKIVSIGSvglgsssfkqsnitlnSGKNYtvsggsntmcvvnPWLSNVSCTEss 157 Methanosarcina b...
ZP_00079212  50 VPAEISSIVATSPPSTILVYMla--pDKLSGWNFkn-------------nFTQLYm-----------vENYSSLPVIGgw 103 Methanosarcina b...
NP_619463    61 VPYPCERTVFLVENAMNSMYAvg-gaDEISGIGAvwy-----------edTKAPFfra--------idPSYDEKRLSRg- 119 Methanosarcina a...
NP_618338    92 FYRPVERIITTNPDNSRIVIAlg-dlEKMVSTDEatrgss----vlpkdeEGNKLapeawealqiyggGQLDELPETNt- 165 Methanosarcina a...
Feature 1                                                                                       
NP_228004    94 -gpGKLPDLESLITlQPDVVFITYVDrk-----taKDIQEk---------TGIPVVVLSYGnlg-tfeDEDLFRSIELAG 157 Thermotoga maritima
NP_907315    87 fggGNQANLEKIISlRPDVVFAWDLAlgnm--kgfEERLNa---------FGIPVIYLRQNt------LKDSLEAVEVMG 149 Wolinella succin...
ZP_00076932  78 --yGVAMNYETLASvKPDIVIIRLGDsafp-ssedDNAQKaiqt---iesLGIPLIVLYSPncyenssPTAISDEIHIIG 151 Methanosarcina b...
NP_616069   135 --qYNVISYEALASsNPDIIILRVGDcsv----gwDNRDTmnktidtmesLGIPVIVLYSPtyysnsdLSTMRDEIKIIG 208 Methanosarcina a...
NP_616775   164 --hGQSVDYEMVLTlKPDIVLLPLWQa--------ENADEi--------aKNLPDTSVVVMgl---asQKSIDSDLTTMG 222 Methanosarcina a...
NP_603207    76 --gQNNLNYEKIIElAPEALITPRNSsye---kdiEQLSK----------AGIKVIVVTGWd------NAHMPEQIERLG 134 Fusobacterium nu...
ZP_00079102 158 -sgMTIVNYEKLASaNPDILIIRVGDcsmsannieNNNKKist----iesLGIPVIVLYSPnnynnsgLNTMRDEMRIIG 232 Methanosarcina b...
ZP_00079212 104 -fgTQTGNYETIIKmHPDIVIEGYTTdge----ihETIERrqe-----sfGNIPVVAVDGSii----fVNKSDPTIQYVG 169 Methanosarcina b...
NP_619463   120 ---SEQPSTETIATaDPQVVFLWASDwg------sEDIKAie-------eTLNTSVYGVYId-----sLDDLQRQMKTLS 178 Methanosarcina a...
NP_618338   166 ---RREIDYETMALlKPDVVFDSLGYnr------gDLVEEk---------VGCPCVDAETGf-----tFEENYVQIRLLG 222 Methanosarcina a...
Feature 1                                                                                       
NP_228004   158 KILGREERAHEVVDFIRKAQEDLVTRSEGVEs-----PTVYVGgig---ykGAHGIDSTeakyp---------pfvvLHA 220 Thermotoga maritima
NP_907315   150 RFLHKEDRAHQLIAYGEESLSRVEKSVESLGdt--pkKRVYFAq-------GEDGLYTEcdidaq------sevialAGG 214 Wolinella succin...
ZP_00076932 152 EVFGKEEEADKIASKLESRQETIRERTQNISdeektdVLVFGLspmh-rtqTSAGIAWGlkt------------tesYMV 218 Methanosarcina b...
NP_616069   209 QIFGKEKDALELADYIQNTEKMISNKTKDIPesn-kpTVLYFGlspnarkaGGAGHSWGidt------------pesYTI 275 Methanosarcina a...
NP_616775   223 FVLGKEAEVNELLSWMQGYEVLVEERTKDLKae--dmPAFYYEymsg-geeKWWVITPDdpsag--------qvaegTGG 291 Methanosarcina a...
NP_603207   135 KVFGNEKGAKKLIEFYNKNLNEVKKRVAKVKn----kKTIYWEygep-yttAIPGTSNDgwvn----------mmrvAGG 199 Fusobacterium nu...
ZP_00079102 233 QLFDKEKEAMVLADYLENTEKMITDRTKDISede-kvTALYLGlsskarqsGGAGYVSGidt------------pesYIL 299 Methanosarcina b...
ZP_00079212 170 KLLNCEDQAQKLIDFRSSVLSEINNTIKDIPed--qkVRVYYAe-------GPKGLMTDpsgsqh------sqvidiCGG 234 Methanosarcina b...
NP_619463   179 KLIGKEERGAEVIELMNESMEKVTDVTGALSpe--ekPTVYWMwgd---vyGTAGLNSTandlver----aggvnilNNW 249 Methanosarcina a...
NP_618338   223 EVLDREAEAEDLENFIQSKVDMVKSVTDQLDds--eiPTVYFApr-----gAKKGFYDSvegrdftrteavyepltiAGG 295 Methanosarcina a...
Feature 1                                                                                       
NP_228004   221 RNVVdelge------ghkfIDPEKLLVWNPEYIFIDENGLSlvlddy---------------skhrefYESLSAVKRGKV 279 Thermotoga maritima
NP_907315   215 VNVHhcpkgs---rgkrerISMEKLYLYDPDVIFVRERPFFeslk-------------------snrsWQKLRAYREGKV 272 Wolinella succin...
ZP_00076932 219 ENVVnaknafrsglgsfevVSTEQILAMDPDVIVIGTAAHYappeely-------------easyyknLRELQAVKNHRV 285 Methanosarcina b...
NP_616069   276 EGIVhaknayr-dtgtakiLNTEQVLALDPDVILLATSWGYhparely-------------eapyyqnLNELSAIKNKRV 341 Methanosarcina a...
NP_616775   292 LNIAtglag------tsveVDPEWVIEKNPDFMFADLMKGFdsgpgktkedme---nllgkvlsgrpgFEKVNAVKNNHV 362 Methanosarcina a...
NP_603207   200 INIFddpti------kgktIDPEKILLEDPDLIMKTTSGAAykntgvytapsqeecknimneminrsgWKDLKAVKSKNV 273 Fusobacterium nu...
ZP_00079102 300 ETVAkgknayh-dtgsgklLNAEQVLTLNPDVIFLPTYSGYhppielq-------------daiyyqnMQELKAVKNKRI 365 Methanosarcina b...
ZP_00079212 235 INVAdcqltp---gsgmtqVSIEQVMNWNPEIIITSNPQFYstvy-------------------sdslWASIDAVKNKKV 292 Methanosarcina b...
NP_619463   250 TNETknvehpvlnleallaLDPEVIYMWNNENLDPVNITSGdtvdg-----------------idfstWKEISAVKNGRV 312 Methanosarcina a...
NP_618338   296 NNLAkdctg------eninVAPEQIVAWAPEYIFVAWSSWDnqtgkdfvmetpe--lseipavkngnvYDCFYPHARGRP 367 Methanosarcina a...
Feature 1                            
NP_228004   280 Y---------GILPYNYYTTN 291 Thermotoga maritima
NP_907315   273 Yl-------dAASPFSWLSRP 286 Wolinella succinogenes
ZP_00076932 286 Vs-------lPYTPRNSARRL 299 Methanosarcina barkeri
NP_616069   342 Ys-------mPWTPSNCARRL 355 Methanosarcina acetivorans C2A
NP_616775   363 YlvdrdiiggPRWVIGHIFFT 383 Methanosarcina acetivorans C2A
NP_603207   274 Y---------ITTGFCSGGLG 285 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
ZP_00079102 366 Ys-------mPYTPRNCDRRL 379 Methanosarcina barkeri
ZP_00079212 293 Yl-------aPQNPFCWIDRP 306 Methanosarcina barkeri
NP_619463   313 Ye--------ISDPFVYDFHS 325 Methanosarcina acetivorans C2A
NP_618338   368 Ld-------rSLLNMMYMAKC 381 Methanosarcina acetivorans C2A

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