Conserved Protein Domain Family
PRK12539

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PRK12539: PRK12539 
RNA polymerase sigma factor SigF
Statistics
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PSSM-Id: 237132
Aligned: 14 rows
Threshold Bit Score: 278.537
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
154244908   3 SPEPDLEALMRASQSGDAAAHRALLHHLSGRLRSYFRNRLRRSGTGTDEAEDLVQDTLLVLHTKRHTYDGSSPVLAWTYG 82 
91978734    1 MVEDELKPLMLASLRGEAAAHRELLSRLSGNLRVYYRGKLARIGRSATEAEDLVQEALMAIHMRRHTYDPAQLLTPWVRA 80 
92109537    2 TKESDLKALMAASLEGDSNAHRSLLTALSGHLRSYYKNKLARAGRTAEEAEDLVQEALIVIHTQRHTYDPEQPLTPWVYA 81 
27380039    5 TTETELKALMLASQDGDAAAHRMLLERLSRHLRAYYKGKFAKIGRGVAEAEDLVQEAVLAIHLQRHTYDPQELLTPWVHA 84 
148240921   3 NLEIELKALMLASLDGNSASHRVLLDQLSRRLRAYYKAKLGAVGRGVAEAEDLVQEAIFAIHLKRHTYDPKEPLTPWIHA 82 
192289483   1 MNENELKPLMLASLHGDAPAHRELLSRLSGYLRVYYRGKLARIGRSATEAEDLVQEALMAMHMRRHTYEPAELLTPWVRA 80 
192289489   1 MDENQLKPLMLASLHGEAAAHRELLSRLSGDLRAYYRGRLARIGRSATEAEDLVQEALMAIHMRRDTYDPAELLTPWVRA 80 
209886721   2 TKESDLKALMTAGLEGDSNAHRSLLTALSGHLRSYYKSRLLRSGRTAEEAEDLVQEALIVIHTQRHTYDPEQPLTPWVYA 81 
209886876  13 TKESDLKELMAASLLGDSIAHRSLLTVLSGYLRSYYKSKLVRAGRTAEEAEDLMQEALIVIHTQRHTYDPEQPLTPWLYA 92 
240141881  21 GQENELRALLSSGLAGSTTDYRLFLERLGPHLRAYFKGKLTRAGRAAPEAEDLVQETLMAVHTRRHTYDVGQPVTPWLYA 100
154244908  83 IARYKLIDYLRANARALRHVQIDEVDDLAdAHDGFSAVDTARELHRALATLPRHFRLPIEYVKIEGLSIAEAAARIGMSD 162
91978734   81 IARYKLIDHLRHTRGAMSDVRIDGIDPLV-EEDAAAGVESSIDLSRLMAGLPEKMRTAVQAVKLDGLSVAETATKFKMSE 159
92109537   82 IARYKLIDHLRRTRSTTADVPLENAEYML-ASNDNAAAESQLDLAKLFERLPERMRLSLQYVKLDGLSVTEAADRSGMSP 160
27380039   85 IARYKLIDFLRRNRASVTDVPIDEAGDVI-ANDDNLSAESSFDLRRLLKHLPEKMQCAIEAVKLDGLSVAEAAQRCHISE 163
148240921  83 IARYKLIDFLRRNHASRAEVPIDEADEVM-AHDDSADAESTHDARRLVERLPKGMQCAIEAVKLDGLSVAEAARRCGLSE 161
192289483  81 IARYKLIDHLRHTRGSMSDVPIDDVEPVV--EDAAAGIERSIDLGRLMALLPEKMRTAVQAVKLDGFSIAETAIKLNMSE 158
192289489  81 IARYKLIDHLRHTRGSMLVVPIDDIDPAA-EDNAAAGIESSLDLGKLMSGLPDRMRTAVQAVKLDGLSVAEAAARLNISE 159
209886721  82 IARYKLIDHLRRTRTTTANVPLENADNIL-ASDDNAAAESQFDLSKLLERLPERMRLSLQYVKLEGLSVAEAADRSGMSQ 160
209886876  93 IARYKLIDHLRRTRASTASVPLENAENIL-ASDDSVATESQFDLTRLLERLPERMRLSVQYVKLDGLSVAEAADRCGISK 171
240141881 101 IARYKLIDHLRRTRASLADLPVEDAGELV-AHDDHAAVESTLDVERLLARLPVKMQQAIRSMKVEGLSAAEAATRSGTSE 179
154244908 163 AAVKIGIHRGMKRLAAVLSEARP 185
91978734  160 SSVKVSVHRGLKALAAMIGREKL 182
92109537  161 SAVKVNIHRGLKILTALIARETK 183
27380039  164 SGVKVNIHRGLKTLAALIAQRTQ 186
148240921 162 SGVKVNIHRGIKALAALVARDTR 184
192289483 159 SSVKVSVHRGLKALSAMIRQEKQ 181
192289489 160 SSVKVSVHRGLKALAAMIGRENA 182
209886721 161 SAVKVNVHRGLKILTALITRETK 183
209886876 172 SAVKVNVHRGLKILAASIARETK 194
240141881 180 SAIKVSVHRGLKAMAALAGGTRQ 202
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