5HSG


Conserved Protein Domain Family
PBP1_ABC_sugar_binding-like

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cd06317: PBP1_ABC_sugar_binding-like 
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periplasmic sugar-binding domain of uncharacterized ABC-type transport systems
Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Statistics
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PSSM-Id: 380540
Aligned: 10 rows
Threshold Bit Score: 332.804
Created: 9-Jan-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative ligand
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:putative ligand binding site [chemical binding site]
Evidence:
  • Comment:based on sequence similarity to the periplasmic transport protein receptor for D-glucose and D-galactose

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #                                                                   
5HSG_A     27 TYALVQinqqalFFNLXNKGAQDAAka--sGKDLVIFNsnd-npVAQNDAIENYIQqGVKGILVAAIdvngixPAVKEAA 103 Klebsiella pneumon...
ADG89284   39 RVGLVQinqqaiFFNQMNEGAQQAAke--vGVDLTIFNand-dpAKQNEAIDNFVQqQFDAIIVVAIdvegvkPAIQAAK 115 Thermobispora bisp...
EST12693   42 TIGFVTinqeayFFTESIRGAQEQAkk--mGVKLVVQNpnn-dpVKQNNQIENLVNqKVDAIIVDSIdtkgviPAMKEAA 118 Sporolactobacillus...
KGQ13372   17 TYALVQinqqalFFNLMNKGAADAAks--sGKNLVIFNsnd-npVAQNDAIENYIQqGVKGILVDAIdvngimPAIKEAA 93  Beauveria bassiana...
BAB54084   29 TYALVTinqqalFFNQINDGAKAAAka--aGVDLVIFNann-vpSAQNDAIENYITqKVDGIILVAIdvngvkPAITAAK 105 Mesorhizobium loti...
ETW11417   25 TICFVSfslqiqYFQKTVEGAEAAAed--lGVELLVFDpqa-daTRQVTLVEDCIArQVDAIVIDPIesnslmGPINEAE 101 Roseivivax sp. 22I...
EDZ99368   29 TYALILinqqavFFNQMRSGAEEEAke--lGAKLVVFNand-asSAQVNAIDDYIQqKVDGIAIDAIdvnavrGALRNAS 105 Burkholderia sp. H160
OQY31043   31 TIAGIVfqd-dqFFNVIQQGMQAAAdd--lGVDLFLANsnn-kpEKEMALVNTYITrGVDAIVISPLsetvsvTALKRAD 106 Spirochaetaceae ba...
OEO28092   26 TVIGGMifqqdqFFRGIQLGMEQSAk---dGGATLLQGnsenklEKEAELVDTFIArGAKAIVLAPLngdasiPALERAR 102 Devosia insulae DS-56
AAN81520   32 TIGAIYldt-qgYYAGVRQGVQDAAkdssvQVQLIETNaqg-diSKESTFVDTLVArNVDAIILSAVsengssRTVRRAS 109 Escherichia coli C...
Feature 1              #                                                            #         
5HSG_A    104 AaNIPVIAIDavlpa----gpqaaQVGVDNiEGGRIIGQYFVdyvqkexggqARLGIVGALNSa--iQNQRQKGFEETlk 177 Klebsiella pneumon...
ADG89284  116 EaGVKIIAVDaivds----pavdtQVGVDNaKAGQQIGEFVNewakeqnlsaPKIGIVGALNSy--iQNVRKDSFEETvt 189 Thermobispora bisp...
EST12693  119 NaHIPVISIDaivks----davstQIGVDNaESSKELGQYVNkyikdnmkkpAKLGVVGALNSf--iQVMRQNAFLDTvk 192 Sporolactobacillus...
KGQ13372   94 AaNIPVIAIDavlpa----gpqaaQVGVDYiEGGKIIGKYFVdyvqkemggqARLGIVGALNSa--iQNQRQKGFEEMlk 167 Beauveria bassiana...
BAB54084  106 AaGIPVIAIDaqipn----gdnvaFVGVDNtKAGEDIGKFYAeyvktklngtAKIGVVGALNSf--iQNQRLDGFKKAvt 179 Mesorhizobium loti...
ETW11417  102 EaGIPMVTLDtaidh----pnilsLVGVEQyQTSREFGRYVAgyiaaemggeATIGLMIASSEv---QIARRDGFVDAie 174 Roseivivax sp. 22I...
EDZ99368  106 TaGIPVVGVDavlpp----gpqkaQVGVDNvVGAKQMATHFLdyvqknlhgsAQVGVVGALSSv--iQNTRQKGFVDAla 179 Burkholderia sp. H160
OQY31043  107 EkGISIITYNsplsa----dfpasYINSSQsELGASSGKQAReyieselggkAKVATLAFKSQlpeiSDMRVNGFLNEit 182 Spirochaetaceae ba...
OEO28092  103 DaGVKVVLYGtsins----dfqvaDIGTSQlDIGRFTGEAAArfitetfggkAKVALLGFRSQlqqmSDDRTNGFLEKak 178 Devosia insulae DS-56
AAN81520  110 EaGIPVICYNtcinqkgvdkyvsaYLVGDPlEFGKKLGNAAAdyfiankidqPKIAVINCEAFe--vCVQRRKGFEEVlk 187 Escherichia coli C...
Feature 1                                                                        #            
5HSG_A    178 sn-pkitIANVVDGQNvqDKAXTAAENLITgnpdLTAIYATGEpALLGAIAAVENQgrqkDIKVFGWDltakai--sgid 254 Klebsiella pneumon...
ADG89284  190 ka--gaqIVQTVDGQNrqEAALTAAENLLTsrqdLDAVYATGEpALLGTVAAINSQqagdRVKVFGWDltkeai--agid 265 Thermobispora bisp...
EST12693  193 qt-pslkVVNIVDGKNvqQTAMTSAENLMTghpeMNIAFASGEpALIGLASAVKSQhkekKLSVFGWDlskqai--qgid 269 Sporolactobacillus...
KGQ13372  168 sn-pkitIADVVDGQNvqDKAMIAAENLITgnpdLTVIYATGEpALLGAIAAVENQgrqkDIKVFGWDltakai--sgid 244 Beauveria bassiana...
BAB54084  180 esgqkvtFLDTVDGQNvqDVALSASENLMTanadMTTLYATGEpALLGAVSAVTSQgrtgDVKVFGWDltksav--qgle 257 Mesorhizobium loti...
ETW11417  175 svlpnveFAAEGDGRNilERATSEAENMLTanpgIDVIYATGDpQLQGALSAGASQg--rDIAFFGWDdipdyf-igpie 251 Roseivivax sp. 22I...
EDZ99368  180 an-pkvkIVGVVDGQNtqDVALSAAENLLTanpdLDAIYATGEpAMLGAIAAVQAQgragKVKVIGWDlapevi--rgvd 256 Burkholderia sp. H160
OQY31043  183 dl-pgveVVSQQDAWLa-EMAVAKAGDIMTanpdLDIIYAANDgGTVGAVMAVKNSg--kKMVVFGIDaseqlatflkdg 258 Spirochaetaceae ba...
OEO28092  179 ag-aeldIVATQDAWLa-ENAVTVATDILTanpgLQVIYAANEgGTVGAVQAVRAAglqgKVFVFGTDgseqlagfllde 256 Devosia insulae DS-56
AAN81520  188 arvpgaqIVANQEGTVl-DKAISVGEKLIIstpdLNAIMGESGgATLGAVKAVRNQnqagKIAVFGSDmtteia-qelen 265 Escherichia coli C...
Feature 1              #                                            
5HSG_A    255 gGYVTAVLQQDPEKXGAEALNALNSIt-sGKTVPKTILVPATVVTKa-NVDSYR 306 Klebsiella pneumoniae subsp. pneumoniae MGH ...
ADG89284  266 aGFVAAVVQQDPKTEGYEAVKEAYAIv-nGAEPKKRIDVPVEIVTKe-NVDRFR 317 Thermobispora bispora DSM 43833
EST12693  270 eGWVKAVIQQHPEKFGSEGVKAAVKLa-kKQKVAKTINAPVTIVTKd-NVDQFK 321 Sporolactobacillus laevolacticus DSM 442
KGQ13372  245 gGYVTAVLQQDPEKMGAEALKALNAIt-sGKTVPKTILVPATVVTKa-NVDTYR 296 Beauveria bassiana D1-5
BAB54084  258 eGWVIAVVQQDPAGEGKAAIEAFGKLk-kGEKIDPIINVPITIVTKe-NVGQFK 309 Mesorhizobium loti MAFF303099
ETW11417  252 eGRLQGFLMQSPEFNGDQGVRLLVQHl-nGEDIPERASYVPTIVTPf-NLDQVQ 303 Roseivivax sp. 22II-s10s
EDZ99368  257 rGVVLGVVQQDPSAMGRASIDALNNAh-qGKPVQAVVATPLTVVTKa-NVGAYR 308 Burkholderia sp. H160
OQY31043  259 dNILQATTGQQPYQIGYQTVEFAVKAi-kGEPVEPTVIVPGLLLSRe-NPEGIE 310 Spirochaetaceae bacterium 4572_59
OEO28092  257 dNVLIATTAQQPFEMGKKATDVALAAa-kGEATEKTYDIPPLALSRy-DLEAVK 308 Devosia insulae DS-56
AAN81520  266 nQVLKAVVDISGKKMGNAVFTQTLKVinkQADGEKVIQVPIDLYTKteDGKQWL 319 Escherichia coli CFT073

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