Conserved Protein Domain Family
PRK09637

?
PRK09637: PRK09637 
RNA polymerase sigma factor SigZ; Provisional
Statistics
?
PSSM-Id: 236601
Aligned: 17 rows
Threshold Bit Score: 253.369
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
218676998   3 LEQVWAEYQQA----LKSFLHSKVNNSADVDDLLQDILIKTYQNLDKVQDASSVKSWLFQLANHTIIDFYRKHARQqrds 78 
114563682   1 MISEWQHHKAQ----LRSYVSNRIDDADAVDDILQDVYLKASGNLHQLKSKGSLKGWLYRIAHNTIMDFYRQRQQF---- 72 
212636397   1 MLSEWQNHKAQ----LRSYVSKRIDDADAVDDILQDVYIKASSNLHQLKSKGSLKGWLYRIAYNTIMDFYRARQPL---- 72 
16079737    3 IEDLWDQFHQP----LKTYISHRVNDQSIVDDLLQIVFMKIQVHLPNLIDEQKIDSWIYRITRNTIIDFYRTKKTS---- 74 
167630874   3 INHIWEKFSGP----LKNFIRKRIPNEQDVDDVLQEVFLKIHANIENLSDDQKMYAWIYRITRNAIADYYRRIEKSvdll 78 
78223988   28 SEQIWQEYHLR----LRAFIKSRIADDAVADDTLQNVFLKMHAGLPSLKDGTKLQSWLYQIARNAIIDLYRSQKAS---- 99 
158320128   5 VDCIWEKFNVP----LKRFIMKRVENEEDADDILQEVFIKIHNNVGGLMDHSKIHVWIYSITRNTIIDHYRKNNKKyeil 80 
78042795    4 LANIFEDFSKEfyqlLKNFIKKQVSQESDVEDILQEVMIKIYKNIDKLNDSSKLQSWIYQIAKNTIIDYYRKQSKS---- 79 
59711579    1 MLSEWQNHKAQ----LRNYVYKRVDDASAVDDILQDVYIKASSNLHQLKSKGSLKGWLYKIAYNTIMDFYRDKLPY---- 72 
197337756   3 LEVIWSEYQSS----LKAFLRSKVSNPEDVEDLLQEILIKTHKNLKTISDAKKVKSWIFQIANNTIIDFYRQNNRR---- 74 
218676998  79 QIDAEDLWFTDLDHNSEFKQKLSLCIEPFIQALPEQSSSLLLAVDIKGQSQKEIAEAQNISYSTVKSRVQKSRGDLKNLF 158
114563682  73 EALPDDLVAEEQESGKEAREELAECLRPLIDELPEKYGTPLRLAELEGVSQQAIAYQLGLSLSGAKSRIQRGRVKFRQQM 152
212636397  73 DALPEELAIEEEDVSTQAHKELAQCLRPLINELPEKYATPLRMAELEGISQQAIADELGLSLSGAKSRVQRSRVKFREQM 152
16079737   75 EILPDVLHFNDSAEEENFTKEATVCIRSTIKRLPEKYREALELTDFQGLSQKELSEKLGISYSGAKSRVQRGRGKLKQLL 154
167630874  79 ESPEDLAIGHDEDINQNV--EIAACLKSMIDSLPEKYKEAVLLTEFQNLTQKELSERMGLSLSGAKSRVQRGREKLKEML 156
78223988  100 TGIPVSLAHPESNPGEKAVQELSDCLQPMIQRLPEIYREAIILSELEGLTQREVAEVLGTSLSGAKSRVQRGRALLKGMI 179
158320128  81 ELPEDIESFT--EKESSYNLEIAHCLKNMVNTLPDIYKQAIILTEFKNMTQKELSEKMGISLPGAKSRVQRGRKKLKEML 158
78042795   80 IFLHDNLVFYSSPVESTFNKEIAQCLKNMIDHLPDPYRQAILLTEYHGFTQKKVSEKLGLSVSGVKSRVQRARKMLKNML 159
59711579   73 DELPEDLVAEDEDAVEESRKEIAECMRPLIDELPDKYSVPLRLAELDGIPQQEIADKLGLSLSGAKSRIQRGRVKFRENL 152
197337756  75 TELLADDLWFDEENEEQVMKELSRCLLPFIKQLSGEDAELLSAIEIEGISQKEYAEKHGLKYSTLKSRVKKSREKLHGLF 154
218676998 159 EECCNLSLDQQGnVIDCELKPDnDCSKC 186
114563682 153 MACCDFEIGQEG-ITSYVPKDPlQRAKC 179
212636397 153 MACCDFEIGQQG-IIDYMPKKP-ECSKC 178
16079737  155 EGCCHIEADRYGnIVDFRILKE------ 176
167630874 157 LGCCHLEFDRLGnVIDYKHKSS-GCKYC 183
78223988  180 ADCCRLELDHNGrLCDYERKGK-ACDAC 206
158320128 159 LDCCCLEMDRRGnIVDYKHKSD-ECKYC 185
78042795  160 ENCCYLEFDRLGnIIDYQHKDT-NCKYC 186
59711579  153 MTCCDFEINDGGmVTGYTPKKT-NCSSP 179
197337756 155 TDCCDFSIDVQGnLIEYQSKSG-ECNRC 181
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap