Conserved Protein Domain Family
hemK_fam

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TIGR00536: hemK_fam 
HemK family putative methylases
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase. Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both E. coli and H. influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain. [Protein fate, Protein modification and repair]
Statistics
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PSSM-Id: 273125
Aligned: 9 rows
Threshold Bit Score: 291.564
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P74003         6 VSGEEFARWYATARQMAIAHg---iETGELNWLLQGWTDLDRLTLRLQDFAHREIALQEtWENIQRGWRRRVEEkYPVQY 82  Synechocystis s...
P45106        23 QTIQDFLRWTYSILNRSDIYfgqghDNPWDESLQLVLSSLHLPIDLPTELFNSRLTPSE-KETLVQLVLTRIEQrVPVAY 101 Haemophilus inf...
P45873         2 KTIFEALKWASSYLTEAGRE-----EN---AAELLLLYDTGMERSKLLASLQEPIGEDE-LYRFKRHVEMHKEG-VPVQY 71  Bacillus subtil...
P37186         1 ---MEYQHWLREAISQLQAS-----ESPRRDAEILLEHVTGRGRTFILAFGETQLTDEQ-CQQLDALLTRRRDG-EPIAH 70  Escherichia coli
P45253         1 ---MNYKEWLAQAIADLAKKnp--tENSKIDALVLLQHATGKSRTQILAFDDTEIDEKV-RLKLTALLDRRLKG-EPIAY 73  Haemophilus inf...
P53944         1 ------MPRISTSLIRKASR------IRPGLHLLLPECRTLEQAKLEYKWLTEELPPDK---SIRWACLQRYKH-VPLQY 64  Saccharomyces c...
WP_000176078   1 MTLSQALNKAKKGLSQKGFR------G-GLESEILLGFVLQKERVFLHTHAYLELNHEE-EVRFFELVEKRLNN-CPIEY 71  Helicobacter py...
WP_020948710   1 MNINEVINYAKGKNLDTI------------EALLILELILKTKKELIIANIKKSLTKKE-KKLFFDQIDKIEKG-IPIHY 66  Lyme disease sp...
WP_001300582  14 QTIQDMLRWSVSRFSAANIWyghgtDNPWDEAVQLVLPSLYLPLDIPEDMRTARLTSSE-KHRIVERVIRRVNErIPVAY 92  Enterobacteriaceae
P74003        83 LLGQTQWRDFVIKVTDDVLIPRPETELIIDIvq-hEHSALSPSNCa-DHWVDLGTGSGAIALGLAATFP--------QAL 152 Synechocystis s...
P45106       102 LTNSAWFCGHEFYVDERTIIPRSPISALIQD----RFEDLISQEP--NHILDLCTGSGCIAIACAYAFP--------NAE 167 Haemophilus inf...
P45873        72 IIGKEFFYGREFMVNDDVLIPRPETEEVVFHll-eKYRSVFSEDGk-LEVVDVGTGSGAIAVTLALENQ--------SFS 141 Bacillus subtil...
P37186        71 LTGVREFWSLPLFVSPATLIPRPDTECLVEQ----ALARLPEQP---CRILDLGTGTGAIALALASERP--------DCE 135 Escherichia coli
P45253        74 ILGEKEFWSLPLNVSKGTLIPRPDTEILVEKalqiALEKLEENPPh-FRILDLGTGTGAIALALASELApicqkrhiPLE 152 Haemophilus inf...
P53944        65 ILRSQPFGALDIVCKPGVLIPRWETEEWVMAiiraLNNSMLSRHTipLHICDTFTGTGCIALALSHGIA--------NCT 136 Saccharomyces c...
WP_000176078  72 LLESCDFYGRSFFVNEHVLIPRPETEILVQK----AL-DIISQYHl-KEIGEIGIGSGCVSVSLALENP--------NLS 137 Helicobacter py...
WP_020948710  67 ILQKKEFMGIEFSLNKHVLIPRFDTECLAEE----ALIQIQQNGf--KKILDLCCGSGCIGLSIAYYIR---------KK 131 Lyme disease sp...
WP_001300582  93 LTNKAWFCGHEFYVDERVLVPRSPIGELINN----KFAGLISKQP--QHILDMCTGSGCIAIACAYAFP--------DAE 158 Enterobacteriaceae
P74003       153 VHAVDCSGSALAIARENAQLNQFGDRIQFHQGYWWEPLEHLk--gQVQGMVSNPPYIPQRELAQLq-PEVIKHEPLLALD 229 Synechocystis s...
P45106       168 VDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFENILGQ----KYDLIVTNPPYVDEEDLADM--PEEFHFEPELALG 241 Haemophilus inf...
P45873       142 VSAVDISKEALQVASANAEKLGAN--VRFYQGDLLEPFIKAg--kKADIIVSNPPYISEEEMADLs-EIVRFHEPLHALT 216 Bacillus subtil...
P37186       136 IIAVDRMPDAVSLAQRNAQHLAIKN-IHILQSDWFSALAGQ----QFAMIVSNPPYIDEQDPHLQ--QGDVRFEPLTALV 208 Escherichia coli
P45253       153 IIGVDLMSDVVALAQSNAERNQLN--VEFLQSRWFDNITG-----KFDLIVSNPPYIDAQDEHLH--QGDVRFEPLSALV 223 Haemophilus inf...
P53944       137 FTAIDVSTRAIKLVKENMLKNKVSG-GKLVQHNILSSKASDeypsHIDILTGNPPYIRKRDFNRDvkTSVKLFEPRLALV 215 Saccharomyces c...
WP_000176078 138 IYASDISPNALEVASKNIEHFCLKERVFLKQTRLWDHMPM------IEMLVSNPPYIARNYPLEK----SVLKEPHEALF 207 Helicobacter py...
WP_020948710 132 VILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKG-----KLDIIITNPPYLNKEELEIK---NKIKKEPTKALL 203 Lyme disease sp...
WP_001300582 159 VDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKV----QYDLIVTNPPYVDAEDMSDL--PNEYRHEPELGLA 232 Enterobacteriaceae
P74003       230 G-GPDGLQAVEQLIRRSPTYLKPGGFWLVEIMTGQAPMVAELLRAS-----GAYQDIQIHRD-LASIERFVSARTLS 299 Synechocystis sp. ...
P45106       242 S-GSDGLNITKQILKQAPDYLTENGVLVCEVGNSMISLIEQYPDVP-----FEWVELKNGGLgVFAIQRKDLVKYHD 312 Haemophilus influe...
P45873       217 D-GGDGLKFYKRFMEDIPLVMKDKVFVVFEIGWKQGAAVKDLILKA-----FKGAEVEVLKD-INGKDRTICALIHK 286 Bacillus subtilis ...
P37186       209 A-ADSGMADIVHIIEQSRNALVSGGFLLLEHG-WQQGEAVRQAFIL-----AGYHDVETCRD-YGDNERVTLGRYYQ 277 Escherichia coli
P45253       224 A-NDEGYADLRHIIELASSYLNSNGVLLLEHG-WQQGEKVRSIFQE-----NHWEMVETVRD-YSDNERVTLGFWKK 292 Haemophilus influe...
P53944       216 G-------ELECYINLVNYWLPKTDSFFYEIGDVEQFNYVE-RRIKedsylSRIWSIGLKYD-SNGKARVVYGFKAT 283 Saccharomyces cere...
WP_000176078 208 G-GVKGDEILKEIVFLAAKLKIP--FLVCEMGYDQLKSLKECLE-------FCGYDAEFYKD-LSGFDRGFVGVLKS 273 Helicobacter pylori
WP_020948710 204 GfGKDGLNISRKILNQAKEKLSPNGLIIIESAPWQIKSLKDFAIKKgfshlKTIYDLEKRARaLILGQRDDTSIRNC 280 Lyme disease spiro...
WP_001300582 233 S-GTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDVP-----FTWLEFDNGGDgVFMLTKEQLIAARE 303 Enterobacteriaceae
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