3T0Y


Conserved Protein Domain Family
NepR

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pfam18557: NepR 
Anti-sigma factor NepR
The general stress response sigma factor in alphaproteobacteria, sigma EcfG is inactivated by the anti-sigma factor NepR, which is itself regulated by the response regulator PhyR. NepR forms two helices that extend over the surface of the PhyR subdomains. Homology modeling and comparative analysis of NepR, PhyR and sigmaEcfG mutants indicate that NepR contacts both proteins with the same determinants, showing sigma factor mimicry at the atomic level. This entry represents NepR domains found in alphaproteobacteria.
Statistics
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PSSM-Id: 465800
Aligned: 120 rows
Threshold Bit Score: 36.1953
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3T0Y_B                     31 QQAIGVKLRQXFDEVVNEPVPDEFLAILRKAER 63 
WP_043144664               15 VDEIDRNLRQAFDDMAQQPVPDRFTDLLAQLKA 47  Mameliella alba
WP_039003902               29 KTQIDENLRRVFEEDAHGDLPDRLVQLLEKLDK 61  Halocynthiibacter arcticus
DEFAULT_DB_NAME:MALG_00269 13 QNQIDSNLKRIYRQPSEGKLPDRMAQLLDQLRE 45 
PRJNA212980:JCM7686_3467   14 EKQIDENLKRVYEEATIQDIPDRFLDLLEKLRA 46 
WP_011749096               14 EKQIDENLRRVYEQDTTQQIPDRFLQLLDKLRE 46  Paracoccus denitrificans
WP_042459612               11 EEQIDDNLRRVYAQAVEEQVPDRFLKLLEQLRG 43  Rhodovulum sulfidophilum
OAO00061                   11 DQQIDDNLRRVYSEASDEPVPERFTQLLDQLRA 43 
WP_009812342               11 NKQIDENIRRVYSEMADEPVPDRFTDLLRQLRD 43  Roseovarius nubinhibens
DEFAULT_DB_NAME:MALG_00272 11 DRQIDENLRRVYSDLSEEPLPDRFSQLLEKLRQ 43 
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