2IQI


Conserved Protein Domain Family
ABC_trans_aux

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pfam03886: ABC_trans_aux 
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ABC-type transport auxiliary lipoprotein component
ABC_trans_aux is a family of bacterial proteins that act as auxiliarires to the ABC-transporter in the gamma-hexachlorocyclohexane uptake permease system in Sphingobium japonicum. Gamma-hexachlorocyclohexane, or Lindane, can be used as the sole source of carbon in S.japonicum in aerobic conditions. Lindane is an insecticide.
Statistics
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PSSM-Id: 427568
Aligned: 58 rows
Threshold Bit Score: 75.0505
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2IQI_F         15 PTVRVTPNPAWPQvsWQLLVAKPSAARIIDSPRINVRP--TPGEL-QVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVA 91  Xanthomonas ca...
WP_012399630   44 PAPTPGSTGTMPA----IKVLDVTAPATLNTDKLVYRLpyADAQQtAAYANSHWTMPPAQLLTQRLRNALSSR--GTVLT 117 Paraburkholder...
jgi:Xaut_4116  50 sAPSGFTAGGSGN--GQMVVVAPTALAVLNTDKVMVEP--GPGQV-AYLSDAQWSDTLPALLQARTIQAFENASKLRRVA 124
Q92K95         44 SVPAVERPGATNR---QLLVPEPTALKTLGSDQIVVRL--SRSEL-QYLARAQWGDSLPRMVQDRLVQTFDNT-GRIRVG 116 Sinorhizobium ...
WP_006315372   40 SSAAVTQGPSLKS--RQLLIADPTALKALDSENIVVRL--SGSEV-QYLGNSQWSDRLPRMVQSKLVEAFEDTGKLGGVG 114 Agrobacterium
Q2YQ49         38 PQPMVTVPKRKNL---QLLIPGPAALKALDSENIVVSS--APGSI-EYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIG 111 Brucella abort...
jgi:Pmen_0370  30 lpAAQLPAQSQRVd-WALRINSPSSSQLLDGTRIVVLP--EPDRV-NTYQGVRWSERTPQLLRNRLLDAFQDDGRIQALS 105
Q6LI49         33 GVQSTTSQIGSNQ--PLLVIRPVEMAEHLAGTGLVYQV--SDTEV-VQAQQNLWAESIGKQLTRRINQDLRSKQSQFWTT 107 Photobacterium...
Q87N56         34 AETKTSNQMSVAEr-PLLVIRPAQLASYLNDNSIVYRT--SDTQI-VQAKRHQWAQSISEQITQRVVAELRQKQSDYWPV 109 Vibrio parahae...
Q9KR87         33 PELSEHIQPKTL---PLLVVQPVELAAYLDTQGIVYRQ--SETQV-IQARQNQWAQRLSPQLTQRITNDLRRKQSRYWPA 106 Vibrio cholerae
2IQI_F         92 RIG--AGIRSDYKLAID--VRRFESDy---AGQslpaATIELNAKLLH-SSDQrVVASRTFTVARPSSSTdTAAVAAAFE 163 Xanthomonas ca...
WP_012399630  118 GSD--GVSAPVLKVDLDvfEQDFDGQs---QSH----ASVTARATLLV-GGk--VAGQRTFIARAPASSAdAAGGARALA 185 Paraburkholder...
jgi:Xaut_4116 125 RPG--DGVNADYQLVID--IRTFALRitdqGPV----AVVELSAKLIG-TQSGrILAAQVFKAAVPAASTaGPVATAALD 195
Q92K95        117 KPG--QGLAIDYQLITE--LRAFEIStd-gAAT----AVVEIFAKILD-DRNGtVRKQQAFRAVVPVRGAgNPAFVAALD 186 Sinorhizobium ...
WP_006315372  115 RPG--QGLAIDYQVVSD--IRAFEIDt--aRNV----ANIEISVKLLN-DRNGtVKAQEVFRASARVSGSgNANFVKALD 183 Agrobacterium
Q2YQ49        112 RPG--DGLAINYQVLTD--LRMFGIQaytsPQT----AVVEMAVRLLSdKTGE-VRATRVFRTAIPVTGTsNAAYVKALD 182 Brucella abort...
jgi:Pmen_0370 106 NEE--QRLQADLELVSD--LRSFHSEyrdgIPY----ALIRLEVNLVD-ARDQrILASRRFSISQQASDTsVPAVIAAFG 176
Q6LI49        108 ELTpaLSTYNSPRLQVK--IDEFNGHy---SGM----AKISGEWMLVK-SDGD-LNGVYPFQFQVPLQEEgYDAQVKALS 176 Photobacterium...
Q87N56        110 EMNnlLDQSGESKLQLT--LNKFNGSy---QGN----AEIEGEWLLID-ASGN-VVRSSQVKILMPLQDEgYDALVDALS 178 Vibrio parahae...
Q9KR87        107 PLNasSIQQEHWKLQVR--LQRFNGVy---TGN----AEVAGNWELLN-PKGE-SMLNQEFSFQVPLKDTgYPALVEALS 175 Vibrio cholerae
2IQI_F        164 QALTQVTTEL 173 Xanthomonas campestris pv. campestris
WP_012399630  186 AASDELVAQI 195 Paraburkholderia phymatum
jgi:Xaut_4116 196 SAQEQVLVQM 205
Q92K95        187 AAFARVAADI 196 Sinorhizobium meliloti
WP_006315372  184 QAFAAATREI 193 Agrobacterium
Q2YQ49        183 KAFDQTVNEI 192 Brucella abortus 2308
jgi:Pmen_0370 177 QAGDQLSREL 186
Q6LI49        177 EGINRLTTQI 186 Photobacterium profundum
Q87N56        179 AGLNQLTDDM 188 Vibrio parahaemolyticus
Q9KR87        176 AGVDQLSTQI 185 Vibrio cholerae
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