3N5L


Conserved Protein Domain Family
Phosphonate-bd

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pfam12974: Phosphonate-bd 
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ABC transporter, phosphonate, periplasmic substrate-binding protein
This is a family of periplasmic proteins which are part of the transport system for alkylphosphonate uptake.
Statistics
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PSSM-Id: 432911
Aligned: 86 rows
Threshold Bit Score: 122.372
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3N5L_B           8 FGIISTESSQNLKSIWEPFLKDXSQQT-GYQVKAFFAPDYAGIIQGXRFDKVDIAWYGNKAAXEAVDRAHg-EIFAQTVa 85   Pseudomonas ...
WP_012469632    29 IGVAPHTSARIILEMYQPLRLHLEKSL-GMPVDIVTATDFNAFARRGLAQEFDVAITTGQQARLLQVDAGy-QPLVTYK- 105  Geobacter lo...
WP_012663263    30 LSMLPRYYPKKIKEMIVPLAEYLSKEI-GATITAVLTKDFTEYENQLKNGEIEIGFENPLVYTKVSQKH---EVLAMAIq 105  Desulforapul...
WP_015774170    46 YAYLPQYSHSVSFERHRRLLEYLRHKT-GLSLRQVFPNTFAEHIKMVERGEIDISFTNPFVYISLARL-Gs-EAFARIVe 122  Desulfomicro...
jgi:Desal_2373  52 YAYLPQYSHRVSYLRHSKLIDYLSRES-GFTIRQVFPDTFEEHRRMVKDGEIDISFSNPMTYVSIAQ-NGa-RAFARIIe 128 
WP_012823568    62 IGVLAYQGKAQTARRWDSTAAYLSEKNpGYSFHIEPMF-LSELAAAVRENRLDFVLTQPLQFVQLAQNDDv-WPLATMVv 139  Halothiobaci...
jgi:Hhal_2151   64 LGILSFESREVAEERWQPLVEYLDGEIdDVQIEGAIA-GYAELDGLLENEQLDFLLTNPMHYVRLRDQYAlsGALATLVp 142 
Q5NYX6          45 LGVLAYRPKPLVEASYQPLAEYLSTEL-RDTRVVLAVLDEHEMKAAMASNRLDLAFTTPSHYLALRAQNAlaGALATLVs 123  Aromatoleum ...
CDK98739        31 lAVFAFRPKPVMVQLYQPLVDYLNQAVpEARLRLVVL-NQEEMEQELGAQRLDLLFTNPSHFIVLRQRNRltGALATLVa 109 
Q39Y63          33 IGYMLCNNEQETMSRFLPLTRYLSDKC-GVDFVAVPV-DTHDFEKRFKAGEFTFTHSNSLIYVILHENEGv-QLLASEKr 109  Geobacter me...
3N5L_B          86 --ASG--A--P--GYWSL--LIANKD-SK-IDSLEDXlanaKSLTFGNGDPNSTSGYLVPGYYVfAKNNVDPVKA----F 149  Pseudomonas ...
WP_012469632   106 ----------A--DFKAV--ALVPST-AH-YRSAADL----KGKTALGLSPTSQV-TVWGQHWL-ADNSLQ---G----M 156  Geobacter lo...
WP_012663263   106 --EKG--G--N--QFRGI--IITRPD-SN-IQLFSDL----RHKKIIIVGKTSAGGFLSQKLSL-AKNGILVEKD----C 164  Desulforapul...
WP_015774170   123 --PDG--G--A--NFQGQ--IIVRAD-NPaINSLADC----RGKRIIAVDPNSAGGFLYPLGLF-FDHGITQKDFqefsF 186  Desulfomicro...
jgi:Desal_2373 129 --PSG--S--P--TFRGQ--IITRKD-NRaITRLKDC----IGKTWIAVDPLSAGGYLFPLG-LfLKNGIKES-D----F 187 
WP_012823568   140 ktPGGt-L--N--RFGSA--IIVRADrSD-LQHVSDL----KNKIVAGASKDALGAWLLGLDTLv-RAGIDPKTQ----I 202  Halothiobaci...
jgi:Hhal_2151  143 -eRQG--ErlR--SFGGV--AFTRAE-HPeVSGWGDV----PDHTVAAVHEDSLGGYQAQAMEL-KRRDLSMPTG----D 205 
Q5NYX6         124 -rREG--E--AtdSLGGV--IITASG-RKdIQGLDDL----KGRKIAIPSQEYLAGYQAQAYELl-QRDIRLPDD----A 186  Aromatoleum ...
CDK98739       110 -vEQGvaV--S--SLGGV--IITGTG-RDdIARLADL----RGKTIAIPGTKFLGGYQTQAFELl-QAGIRLPDD----A 172 
Q39Y63         110 ----G--K--F--GARSAgaLIARKG-SG-IEKLADI----RGKRLAFGPMLAPTGYLAEYD-LmLSAGINPEHD----L 168  Geobacter me...
3N5L_B         150 KRT--L---N----S-SHEVNALAVANKQVDVATFNTEGXERLELTQPEKARQLKV-----------I-----------W 197  Pseudomonas ...
WP_012469632   157 PIK--Y---V----S-ASDSVAHLLVAGEAAVGFTSLANYQK---LPLDLRGKLHL-----------F-----------A 201  Geobacter lo...
WP_012663263   165 DIEeaA---N----N-KQENVIISVSIGDADAGFIRESALHIA--DQYIQPGSVVV-----------M-----------T 212  Desulforapul...
WP_015774170   187 ATG--A---G----G-RQEAVVLAVYTGAYDVGTIRKGTLDVVRDK--IDMEQIRV-----------L-----------A 232  Desulfomicro...
jgi:Desal_2373 188 KEIs-F---ApgpgG-KQEKAVLAVYAGKYDFASIREGTLNVVRDK--INIDKIRI-----------V-----------A 238 
WP_012823568   203 QPL--F---T----GlPMFQIVEAVWQHRADAGVIRAGFLEQLESQGAVKKGEFRVldpsqysdypyL-----------V 262  Halothiobaci...
jgi:Hhal_2151  206 AIH--F---T----GmPHRQVVDRVMGGEADIGFVRISVLERLWEEGELARDAVRI-----------IgeqayagfpfvA 265 
Q5NYX6         187 KIL--E---V----G-NHDAVVDAVLSGTAEVGFIRSGILESLVAAGRIGPADFKV-----------InrqhlpgfpyqV 245  Aromatoleum ...
CDK98739       173 SLL--N---V----D-GHDGVVQTVAAGKADAGFIRTGILEAMIREGRVSPDSLKV-----------V-----------N 220 
Q39Y63         169 GTYs-IppgS----Y-KHEKLIYGVLYGQYDVAAAPILDLETMTREGKIAADDFVI-----------L-----------A 220  Geobacter me...
3N5L_B         198 -----------KSPLIpGDPLVWRNN---LSDEQKNKLRDFFFKYGA-N------AEQKKVLADLQWSKFQASDDDQL 254  Pseudomonas ae...
WP_012469632   202 -----------QSKSMpGRVYMLNKR----RAALKKKIEVALRGFAA-S------AEGKQYFNSNKLEGYRLLKRDEL 257  Geobacter lovleyi
WP_012663263   213 -----------PCEWLpNWAISVNRA---MPGPVKAAIKSAILALDK----------NSPVLKAMHIAGFKSAVDSEY 266  Desulforapulum...
WP_015774170   233 -----------ESRPYpGWVYSVRKG---FDPAIKDKIARALLDLSMnR------REDATVLAAAGMIDIISARDEDY 290  Desulfomicrobi...
jgi:Desal_2373 239 -----------ETEPFpGWVYAARKG---LSEKVVDKIKYCMFRMSMdN------PEQAAILYQAGMRGIIPAQDSDY 296 
WP_012823568   263 -----------STELVpEWPFSATSS---VDRVFAEKVARDLMGM---T------PDNPALISSGISKWALPLDYSTV 317  Halothiobacill...
jgi:Hhal_2151  266 -----------STALYpEWPLVHLEEaegQQSSIGREMTTALLRLGP----------DHPASRAAGIAGFSV--PMDY 320 
Q5NYX6         246 -----------STRLYpEWPLLALPH---VDAHASRRIAGALLALE----------HDHPAARAAGIAGFTIA--ADY 297  Aromatoleum ar...
CDK98739       221 pqnppgfpfqlSTRQYpEWAFSALPH---VNERVVRRITSALLALEP----------DHPAAKAASIHGFTIpadylp 285 
Q39Y63         221 -----------QSKPVpYCTFGVAKG---ADPALVKKVKEALLALKP-AdtaevdGERIKVLKAAWIDGYEELLDSDY 283  Geobacter meta...
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