3CAX,5FNP,2MHR


Conserved Protein Domain Family
Hemerythrin

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pfam01814: Hemerythrin 
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Hemerythrin HHE cation binding domain
Iteration of the HHE family found it to be related to Hemerythrin. It also demonstrated that what has been described as a single domain in fact consists of two cation binding domains. Members of this family occur all across nature and are involved in a variety of processes. For instance, in Nereis diversicolor Swiss:P80255 binds Cadmium so as to protect the organizm from toxicity. However Hemerythrin is classically described as Oxygen-binding through two attached Fe2+ ions. And the bacterial Swiss:Q7WX96 is a regulator of response to NO, which suggests yet another set-up for its metal ligands. In Staphylococcus aureus P72360 has been noted to be important when the organizm switches to living in environments with low oxygen concentrations; perhaps this protein acts as an oxygen store or scavenger. This domain can bind oxygen (Matilla et.al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043)
Statistics
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PSSM-Id: 396400
Aligned: 188 rows
Threshold Bit Score: 29.8835
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3CAX_A         9 HPLKTLYQENKEIMKDAE-ML----NLYAKTlaTTKDErmreeiLGVLEEIVS-SLRMV-GFTHYNREEMLIFPYIE--- 78  Pyrococcus furi...
EBA00905       2 ASLNQLRRDHANMARLLHvLL----RRHKHLe-QGERPd-----FHLIREVVD-YILEY-MDGFIMPLERL-YSEHLlak 68 
Q87SC3         7 MMIERIRREHGYMVRLLA-IL----RHKLNE--IKEENai---nYSLVSEIVD-YLSNH-SEKIHHPKEDILYHHFLk-- 72  Vibrio parahaem...
Q9KPK9        31 MMMERIRREHSYMVRLLS-IL----RHKLDL--VKSEQpi---nYSLLKEIVD-YLASH-SEKVHHPKEDILYRHYMa-- 96  Vibrio cholerae
Q7MNQ9         7 MMIERIRREHGYIVRMLA-IL----RHKVEL--LKNEQpi---nYSLVAEIVS-YLSDH-AEKVHHPKEDILYRHYLe-- 72  Vibrio vulnific...
WP_009024076  18 PMLVALRGEHRHIASVLA-LL----SDHLNA--IERSElv---dTHVVYEIMDyMVTWP-DRFHHPREDLI-FSYAAd-l 84  gamma proteobac...
Q6N990         3 RIIELLNDEHRNIARLLD-VL----EQELSV--FDRRErpdyeiFQAIIQYFK-EYPEA---CHHPKEDVV-YRILKe-r 69  Rhodopseudomona...
CAP64006       7 NTITDWHNDHLYFAHLLD-LL----QNQIGA--FFEGRhp---nYRLIAKIVE-YMCDYgDRIHHPREDVA-FSLLVk-r 73 
Q7WXD7         3 DQLAIWHADHINFAALLD-LL----EEQVSV--FHRGEqpnyslIGTIIYYMR-NFGDR---VHHPREDVA-YALLVe-r 69  Cupriavidus nec...
WP_012406331 135 LVIGKLLGQHRAAGAQLH-GLlcdmHAAVSR--GEPSCav---aMDRIVAALH-NLQS--LRDRPGKDACV-FARLRe-r 203 Paraburkholderi...
3CAX_A        79 RRGLTVIATVLWTKHDEIR----AMIKQLA-ELLRKREem--pWEEFVE------KFKAKAGEVAfalsDMVFRENNIFY 145 Pyrococcus furi...
EBA00905      69 EPEAEALSHRMGDDYQALRkrlnLLSETLDmILMDHVVp----MERFIE------DLKTYLDAHN----VYLKVEREKLF 134
Q87SC3        73 HYGKQQTMENLEKEHQELA----EKTKEFS-MLIEMIL-----QDAVVPqdifiaQLEDFIESQK----RHLELEERKIL 138 Vibrio parahaem...
Q9KPK9        97 HYGDEQQVANLEREHQELA----QITHQFL-DVMEMIL-----NDAVVPqdvfieQLEAFLQGQK----QHLELEEQSIL 162 Vibrio cholerae
Q7MNQ9        73 HYGAQRTIENLELEHKELA----KKTAAFA-DVMHMIL-----NDAVVPqamfieQLEAFISSQR----QHLDIEERLIL 138 Vibrio vulnific...
WP_009024076  85 DHRLAEDRRRLEQDHDHMLrngrELLQAVV-DWRQGELs----GSEVVR------LGRAYVQASY----GHMSFEEQEVF 149 gamma proteobac...
Q6N990        70 NPAVAGTVGDIEKEHELEV----DRLANFA-KVVDDVL-----ADQELPrqtfhaAARDFIEHQR----RHMLKEEQLLF 135 Rhodopseudomona...
CAP64006      74 DPDIQLVVNRLLQEHLVIA----ETSAQLL-DHFKGAEwd--vITPRDVlv---aQAAVYLAYYR----NHLSSEEKLVM 139
Q7WXD7        70 DPGMQIVVSRLLQEHRIIArvreELLSRLNeAERDVITs----RAALEA------AAAMYLVYYR----NHLSTEERHVM 135 Cupriavidus nec...
WP_012406331 204 TSAFDAELDELEHQHRHEA----RLLDALM-EGARAAArgelpPVCFEQ------QLQTCAQFIW----EHMGREEGVIL 268 Paraburkholderi...
3CAX_A       146 PTL 148 Pyrococcus furiosus DSM 3638
EBA00905     135 PFL 137
Q87SC3       139 PLI 141 Vibrio parahaemolyticus
Q9KPK9       163 PLI 165 Vibrio cholerae
Q7MNQ9       139 PLI 141 Vibrio vulnificus YJ016
WP_009024076 150 PAI 152 gamma proteobacterium NOR5-3
Q6N990       136 PAA 138 Rhodopseudomonas palustris
CAP64006     140 PRT 142
Q7WXD7       136 PRA 138 Cupriavidus necator
WP_012406331 269 PAA 271 Paraburkholderia phymatum
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