1Y2I


Conserved Protein Domain Family
YbjQ_1

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pfam01906: YbjQ_1 
Click on image for an interactive view with Cn3D
Putative heavy-metal-binding
From comparative structural analysis, this family is likely to be a heavy-metal binding domain. The domain oligomerises as a pentamer. The domain is about 100 amino acids long and is found in prokaryotes.
Statistics
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PSSM-Id: 426504
Aligned: 102 rows
Threshold Bit Score: 93.68
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1Y2I_A         28 STTPTLeglTIVEYCGVVTGEAILGA---NIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGI 104
Q65JC5          4 VTTDTIanqNIVEVKGLVTSSIVQSR---NIGKDILSGLKSVIGGELKNYTQMLEDSKKAVRERLVNQAEELGANAIVGL 80  Bacillus liche...
Q5NG98          4 TTADTLgkrEIIEYKGLVTGIIVRTP---TITQGILGGLKNIIGGKNTSYTNVCKEARLHAEQEMINQAKELGANAIVAI 80  Francisella tu...
Q2NFL0          4 CTTENIg-hEY-EVIGLVRGNCIQSK---NIVRDFTQGLKNIVGGELGEYTKMMEEARTTATDRMVEHATKLNADAIVMI 78  Methanosphaera...
WP_021943703    4 VNTENIpgrEY-QVLSLVTGCCVMCK---NIGKDIGASFRNMVGGEMQAYTQMMAEAKDKAISYMINQAMSMGADAIVNV 79  Coprococcus eu...
Q3IR53          4 VSTETVpghETVEALGIARGNTVEAR---NVGRDITQSIRNITGGELKAYSELLSKARDEALSRMEADAEEMGADAVVNV 80  Natronomonas p...
Q9HMQ5          4 VTTETVpgrEITESLGVARGNTVKAR---NVGRDITQSIRNITGGELKAYSELLTDARDDALDRMAEDARSMGADAVVNV 80  Halobacterium ...
jgi:Dshi_1071  11 VTTEAVpgrEIDHALGMVRGSTVRAK---HIGSDIVAGLRNLVGGEVKEYASLLAGAREQAYDRMVEQAFEMGAHAIVAC 87 
WP_012199535   71 TTGNSFegyHITEYIDVIFDERLTGIkseTSLRSLSDILSSFAGAELRAYTKQINELKRQVKESLKQHAVFIGGNAIIAI 150 Lachnoclostrid...
Q2SKK5         45 SMGRHIpeaRANVEARLVTGSVVVSV---DYFKRFFATLRLLIGGRLFSYESLLERARREAILRMKEQAVSLGSKEIYNV 121 Hahella chejue...
1Y2I_A        105 DIDYETV----GQ--NGsxLXVSVSGTAVK 128
Q65JC5         81 RFELSA-----GQ--GT--SELIGYGTAVV 101 Bacillus licheniformis DSM 13 = ATCC 14580
Q5NG98         81 RYDSSSL----GGntSG--TEVFCYGTAVV 104 Francisella tularensis subsp. tularensis SCHU S4
Q2NFL0         79 RYGTGSV----SP--ES--AEVLAYGTAVK 100 Methanosphaera stadtmanae DSM 3091
WP_021943703   80 RFASTTI----VA--GG--AEILVSGTAVK 101 Coprococcus eutactus
Q3IR53         81 RLETSKV----TD--GG--SEVIAYGTAVR 102 Natronomonas pharaonis DSM 2160
Q9HMQ5         81 RLESSEI----AN--GG--SEVIAYGTAVT 102 Halobacterium salinarum NRC-1
jgi:Dshi_1071  88 RMETSTI----QQ--AA--SEVLFYGTAVR 109
WP_012199535  151 HFETTITe------cGA--IMVSINGTAVK 172 Lachnoclostridium phytofermentans
Q2SKK5        122 KLETSTIssgmQSalGT--VEVLAYGTAVV 149 Hahella chejuensis KCTC 2396
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