3FVV


Conserved Protein Domain Family
HAD_PGPPase

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cd02612: HAD_PGPPase 
Click on image for an interactive view with Cn3D
phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C
This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Statistics
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PSSM-Id: 319796
Aligned: 30 rows
Threshold Bit Score: 141.675
Created: 3-Aug-2004
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #####                                                                       
3FVV_A      6 LALFDLDHTLLpldsdYQWADFLArtgr--agdpAEARRRNDDl-------------------MERYNRGELtae---qa 61  Bordetella pertuss...
BAD13384    3 LALFDFDGTITt---rETMPDFVRrs-------vSRRRLLVGQlll--------------aplVLGYKIGILsg----tl 54  Escherichia coli
NP_943330   9 LSVFDFDGTLTr---hDSFIPFLRfaf----gnrAFSRRIVSMa------------------lPTLRCMGKQmtr--del 61  Klebsiella pneumon...
B8GX15     27 LVAFDFDGTLTv---kDSFNAFLKw--------rAGPRWSFGVlrl--------------tpaLIAYVFDRNrgklkaaa 81  Caulobacter cresce...
P0AD42      8 VVFFDLDGTLHq---qDMFGSFLRy---------LLRRQPLNAllvlpl---------lpiiaIALLIKGRAar----wp 62  Escherichia coli K-12
NP_636712   3 LALFDFDHTVTt---cDTYARFLRqv------asPEQRAAARWqvg---------------pwVAGYRLGLVsa----pr 54  Xanthomonas campes...
NP_348844   4 LAIFDVDYTLTk---kETLFEFYKfmisknpkiiAKLPKILVAg-------------------ILFFAKILDag----ka 57  Clostridium acetob...
NP_420731 123 LAVFDMDGTLLn---gDSTAVWLWe---------RAKRSPLRMlgila----------vapvaVPMVALPLTrr----ag 176 Caulobacter cresce...
NP_603789   7 AAFFDIDGTIYrn--aLLIEHFKKlvkye-lfddIQYRLKVEEaynlwdt-------rkgdydDYLLDLTQL-------- 68  Fusobacterium nucl...
NP_346904   5 AAFFDIDGTLYre--gLISEVFKKliky---eiiDEEKWYKEVrpefekwdnrkgdyddyllkMTEIYVDALng----ls 75  Clostridium acetob...
Feature 1                                                                 ##                  
3FVV_A     62 AEFMLGLLaahspv--elaawhEEFMRDVIRPs----lTVQAVDVVRGHLa-aGDLCALVTATn-SFVTAPIARAFGVq- 132 Bordetella pertuss...
BAD13384   55 IRRVIVRFaysgipasvleaqgRDFAQSYLPNt----lRGEAMQRIAWHKa-qGHKVVVVSGGl-EAYLEPWCDSHGV-- 126 Escherichia coli
NP_943330  62 KETLITTFltgveek-wvsskaEEFCELYWHRl----mRPAGLIAVANEVt-sGAIVTLCSASp-EIVLRPFAEKLRI-- 132 Klebsiella pneumon...
B8GX15     82 VRQFLKGAtvaqi-----endaRAFAEAFAPSl----lRPDAVAVWRGWRa-kGAKMVIVTASp-DLIVAPFARGLGAd- 149 Caulobacter cresce...
P0AD42     63 MSLLLWGCtfghsea-rlqtlqADFVRWFRDNvt---aFPLVQERLTTYLlssDADIWLITGSpqPLVEAVYFDTPWLpr 138 Escherichia coli K-12
NP_636712  55 LRARVTRLvftgraldemqthgASYARTDLPGv----lRPEVMRRIDWHQa-qGHEVVLVSGSl-DLYLQPWCTQHGL-- 126 Xanthomonas campes...
NP_348844  58 KEMFISFIdgikee--dmkeyvKEFYDLKLSKi----lYVDAINTMKKLKs-eGYDIFLISASa-EFYLNELYNIKEVd- 128 Clostridium acetob...
NP_420731 177 ASILLWIAtaglseq-qllascDDFARAFAERrcslswKPQALAALDQHAa-aGDRVVVVTAAp-LCLANALLRTLDRr- 252 Caulobacter cresce...
NP_603789  69 YVVAIKGLpvky------ndfiSNQVLLLKGNr----vYTYTREMIEWHKk-mGHKVFFISGSp-SFLVSRMAKKMGVd- 135 Fusobacterium nucl...
NP_346904  76 KSQVEFIA--------------SQVVNQKGERv-----YTYTRDRIKWHKe-rGHKIITISGSp-IELVRNMAEKYGFd- 133 Clostridium acetob...
Feature 1                                   #                        ##  ##                
3FVV_A    133 -HLIATDPEy--rDGRYTGRIEGtpSFREGKVVRVNQWLAgmglalgdfaeSYFYSDSVNDVPLLEAVTRPIAANPS 206 Bordetella pertussis ...
BAD13384  127 -ELICSSLQq--sDGILTGRYEGrqCVLTEKARLVRERYDlat-----yptIYAYGDTPEDLDMLAIATKQYYQWQE 195 Escherichia coli
NP_943330 133 -KLIGTQLEt--kDGILTGRISGhnCRCSQKIIRLEKEYGplt-----dyhLRAWGDTRGDYELLSAATEPHWRHFH 201 Klebsiella pneumoniae...
B8GX15    150 -LLIGTRLRcs-dDGRILGGLDGnnCRAKEKVIRLREVFGpdv------rlTAAYGDTSGDTEMLAIADEKGYRIFR 218 Caulobacter crescentu...
P0AD42    139 vNLIASQIQ----RGYGGWVLTMr-CLGHEKVAQLERKIGtpl------rlYSGYSDSNQDNPLLYFCQHRWRVTPR 204 Escherichia coli K-12
NP_636712 127 -SLICNQLEh--aAGRLTGRYADg-DCGPHKAAQIRLRYTlaq-----ydcVHAYGDSREDRPMLALAQQRWYRGQQ 194 Xanthomonas campestri...
NP_348844 129 -RVIGTRFTn--eNGIFRRKIIGenCKGEEKVKRLKEVLEeekie-vdfkeSYMFSDSLSDMPLFKLVGHPYLVNPK 201 Clostridium acetobuty...
NP_420731 253 vEVLGTSLK----PGLGGWIANIh-CRNQRKCQALAEAGHga-------rwAYAYTDSLDDLPILRAADRPVIVKGG 317 Caulobacter crescentu...
NP_603789 136 -DFCGSVYEideeTQTFSGKILKpmWDSAHKQEAIENFIKkyni---dlskSYAYGDTNGDFSMLSLVGNPRAINPS 208 Fusobacterium nucleat...
NP_346904 134 -DYRGAEYLld-eNDVYTGEVIPm-WDSKSKERAVHELEAkyni---dlgeSYAYGDTSGDLTMLKMVGNPVCINPT 204 Clostridium acetobuty...

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