1H3H,1IO6,2SEM,1UTI


Conserved Protein Domain Family
SH3_GRB2_like_C

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cd11805: SH3_GRB2_like_C 
Click on image for an interactive view with Cn3D
C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins
This family includes the adaptor protein GRB2 and related proteins including Drosophila melanogaster Downstream of receptor kinase (DRK), Caenorhabditis elegans Sex muscle abnormal protein 5 (Sem-5), GRB2-related adaptor protein (GRAP), GRAP2, and similar proteins. Family members contain an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. GRB2/Sem-5/DRK is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. GRAP2 plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. GRAP acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. The C-terminal SH3 domains (SH3c) of GRB2 and GRAP2 have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212739
Aligned: 16 rows
Threshold Bit Score: 92.3058
Created: 6-Jun-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Comment:RxxK- and RxxxxK-motif peptides also bind to this site.
  • Structure:2SEM; Caenorhabditis elegans Sem5 C-terminal SH3 domain binds peptoid inhibitor (xpppvxprr); contacts at 4A.
  • Structure:1IO6; Human GRB2 C-terminal SH3 domain binds a proline-rich peptide ligand (rhyrplpplp); contacts at 4A.
  • Citation:PMID 7881903
  • Structure:1H3H; Human GRAP2/GADS C-terminal SH3 domain binds RxxK-motif SLP-76 peptide (apsidrstkpa); contacts at 4A.
  • Structure:1UTI; Mus musculus GADS C-terminal SH3 domain binds HPK peptide with PxxP and RxxK motifs (gqpplvpprkekmrgk); contacts at 4A.
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # #  ##  #                 ##          # # ##   
1H3H_A         5 WARALYDFEALEedELGFRSGEVVEVLDSsnPSWWTGRLHnKLGLFPANYVAP 57  house mouse
1IO6_A         4 YVQALFDFDPQEdgELGFRRGDFIHVMDNsdPNWWKGACHgQTGMFPRNYVTP 56  human
3913785      162 FAQAQFDFSAQDpsQLSFRRGDIIEVLERpdPHWWRGRSCgRVGFFPRSYVQP 214 human
2SEM_B         4 FVQALFDFNPQEsgELAFKRGDVITLINKddPNWWEGQLNnRRGIFPSNYVCP 56  Caenorhabditis elegans
729368       156 LVQALYDFVPQEsgELDFRRGDVITVTDRsdENWWNGEIGnRKGIFPATYVTP 208 fruit fly
XP_002399341 156 LVQAMYDFQPQEtgELEFRRGDIINVHDRsdANWWEGEIGpRRGYFPATYVVP 208 black-legged tick
XP_001181623 113 RLQALYDFDPEEegELCFRKGDIITLIDKptKDWWRGTVDgRTGMLPAPYVKE 165 purple urchin
XP_002131475 158 KVQAAYDFRRQEpgELEFCQGDIITVTEWmdKNWWRGSVNnCTGIFPSNHVIV 210 Ciona intestinalis
ADD38444     156 LVQALYDFIPQEvgELEFRRGDVINVTDKadRHWWAGELGnKRGYFPARYVSP 208 salmon louse
EGF81102     720 QVRALYDFTPSSpgELTFKSGDIIKVTQSsdPDWWDGELDgVVGAFPARYVTS 772 Batrachochytrium dendrobatidis JAM81

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