1E0G,2L9Y,1Y7M,2GU1,2DJP


Conserved Protein Domain Family
LysM

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cd00118: LysM 
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Lysin Motif is a small domain involved in binding peptidoglycan.
LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
Statistics
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PSSM-Id: 212030
Aligned: 2398 rows
Threshold Bit Score: 29.3757
Created: 1-Nov-2000
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1E0G_A          3 ITYRVRKGDSLSSIAKRHGvNIKDVMRWNSdtan-----lqpGDKLTL 45   Escherichia coli
EDP55411      361 ATYSIQTNDTCSAIAAANSmTVTQLESRNSdvwgws-gcqslYIGQVI 407  Aspergillus fumigatus A1163
XP_003174933  336 ASYTVKSGDTCSAIAASNGlKVEDLGKFNDkttwgwfgcnalLAGTRI 383  Arthroderma gypseum CBS 118893
EFX05124      312 YTYVVSTGDTCSAIALTYGiNIAAVEDNNDntwgwm-gcsdlQIGQYI 358  Grosmannia clavigera kw1407
EEA25966      357 YTYNVQAGDTCAAVAASYQmQATVIENVNNntwgwm-gcndlLIGMSI 403  Penicillium marneffei ATCC 18224
EFZ03350      671 AAYTVQGGDTCGSIAAFNGiQTSDVENLNKktwgwf-tcnnlQVMART 717  Metarhizium anisopliae ARSEF 23
EEA26398      347 VVYNVQPGDNCAAIAANYGwQISDLSTFNDgttwgw-sgcalQTGLAM 393  Penicillium marneffei ATCC 18224
EFQ36789      423 AVYTTKEDDYCSKIAASFMlTIEELESFNKntwgwngcktplYTKFNV 470  Glomerella graminicola M1.001
CBF76227       30 TSDVIQQDDTCDEIAKANKmDSDKIADYNSltwgwe-gcnglQRGQAI 76   Aspergillus nidulans FGSC A4
CBF79744      323 AAYLTGNNDTCASIAHAHNmEVEKIRYYNDgrtwgwtgcdqlQSGLRI 370  Aspergillus nidulans FGSC A4
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