1LR0


Conserved Protein Domain Family
tonB_Cterm

?
TIGR01352: tonB_Cterm 
Click on image for an interactive view with Cn3D
TonB family C-terminal domain
This model represents the C-terminal of TonB and is homologs. TonB is an energy-transducer for TonB-dependent receptors of Gram-negative bacteria. Most members are designated as TonB or TonB-related proteins, but a few represent the paralogous TolA protein. Several bacteria have up to four TonB paralogs. In nearly every case, a proline-rich repetive region is found N-terminal to this domain; these low-complexity regions are highly divergent and cannot readily be aligned. The region is suggested to help span the periplasm. [Transport and binding proteins, Cations and iron carrying compounds]
Statistics
?
PSSM-Id: 273570
Aligned: 40 rows
Threshold Bit Score: 36.5123
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1LR0_A        43 RRPPSARNGXS-VEVLIEXLPDGTITNASVS-RSSGDKPFDSSAVAAVRNVGRIPexqQLPRA----TFdSLYRQRRIIF 116 Pseudomonas aer...
O25899       213 KMAQIRGIEGE-VLVSFTINADGSVTDIKVV-KSNTTDILNHAALEAIKSAAHLF---PKPEE-------TVHLKIPIAY 280 Helicobacter py...
P50600       267 rRPPSARNGMS-VEVLIEMLPDGTITNASVS-RSSGDKPFDSSAVAAVRNVGRIP---EMQ-QlpraTFdSLYRQRRIIF 340 Pseudomonas aer...
WP_011712163 345 qRPSGDIHVGRsMMLRVQWLENGTLEWVSTV-RPSGHEGYDETVLKAVEAVAQLP---PPP-Egct--lcLRPIYITMHN 417 Magnetococcus m...
WP_019861736 305 LPVGLEGSENFvVVVRFNLDNSGKLDGRPSVeKSSGNRQFDESAVRAVQKCDVAG---LQVPAgk----qdIWNDIRVTF 377 Mesorhizobium loti
WP_010921337 324 AAAKAAKAEGF-AVIDCRVTATGQLTACKVLrESADAYGFGAAALQLGTIFQMSP---LTI-Dgk--pVnGGQVTIPIRF 396 Caulobacter vib...
WP_010920186 164 ESAQRRGLSGQ-VTLNCMVALNGTVRDCVVAtESPADEGFGSAALKISRFFKMKP---QTE-Ngd--pVdGATVRIPIRF 236 Caulobacter vib...
EMR57239     123 QVAAYLGQDGT-NAVEFYLHPNGDITDLKII-IGSEYKMLDDNTLKTIQIAYKDY---PRPKT-------KTLIRIRVRY 190 Helicobacter py...
WP_002864421  38 RQARKMRMSGE-VLVEFTWTKEKKLENLKIL-KPSKYDFLNKSALETIRIASKKF---PQYEK-------TFHIKIPLVY 105 Campylobacter j...
WP_010880311 193 YIARRMGWEGK-VILEIILSEKG-CESVRVA-HSSGHKVLDRNAVETVKALCGKF---PKPRE-------KIRLRLPISY 259 Aquifex aeolicus
1LR0_A       117 KPE 119 Pseudomonas aeruginosa
O25899       281 SLK 283 Helicobacter pylori 26695
P50600       341 KPE 343 Pseudomonas aeruginosa PAO1
WP_011712163 418 EQP 420 Magnetococcus marinus
WP_019861736 378 DPR 380 Mesorhizobium loti
WP_010921337 397 SVP 399 Caulobacter vibrioides
WP_010920186 237 NAG 239 Caulobacter vibrioides
EMR57239     191 YLG 193 Helicobacter pylori CCHI 33
WP_002864421 106 KLS 108 Campylobacter jejuni
WP_010880311 260 VLR 262 Aquifex aeolicus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap