Conserved Protein Domain Family
OMP_w_GlyGly

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TIGR04219: OMP_w_GlyGly 
outer membrane protein
Members of this protein family are outer membrane proteins (OMP), as can be seen by their homology to YfaZ protein (see ) and by the OMP targeting region at the C-terminus, including a C-terminal Phe residue. Members of this protein family are found in the great majority of genomes with the GlyGly-CTERM protein sorting signal and the rhombosortase putative sorting enzyme, although the relationship may be fortuitous.
Statistics
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PSSM-Id: 275061
Aligned: 32 rows
Threshold Bit Score: 166.333
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_01224086    2 SLFRLg-LLATLTTAPLAVSAD-IIGLYGGTGIWQSSPSGT--------Lg---N-------TGISLENTLNFDQENSNY 61  gamma proteobac...
ZP_01078772    2 RPA----LILGSLLIAANANAD-FLGLTAEVGSFSPDADTT--------A----A-------STGSSITSNNMDADSGTY 57  Marinomonas sp....
ZP_08621660    2 KKMLSitAATCLVALSAPVSADvLFSLEAEAQYWQADAGGY--------Ht--yA-------QTLDSGDIYDWKKSGQLG 64  Idiomarina sp. ...
ZP_02177290    2 KKA----ILLGALFSVGSSFAVpLVNAEFSVGAMSHDPSGY--------Iqy-qG-------DKVDVKDGFGLEKETKPF 61  Hydrogenivirga ...
WP_013325907   2 KKILS--TIAMSTFLSVSLCAD-ITKVEIGAGAWGQTPSGT--------AnydrG-------LGITGTNTFDETKDTSPY 63  Sulfurimonas au...
WP_011398659   2 KRAMM--TLL-AAMACNGAYADtI-GLFAGISGWNADFTGD--------Vqs-gS-------ESVDLEKDLGLDDDTFIQ 61  Hahella chejuensis
WP_013459051   1 ---mfrasILVLCLVSVSASAAtILGFGAEADYYTPSASGD--------F----D-------YKNT-HTRFGNNDESGYQ 57  Sulfuricurvum k...
WP_012676547   2 KKTFS--ALAVLSLFGLS-QAVpLFEGEISAGYIKQKPSGW--------Vqy-kG-------DQVDLKDDLNIGDEDSYF 62  Persephonella m...
WP_012173456   2 KKLWI--GLALALLLAVPATSF-AIGLEAAIGGWGQDISGDmaykplnpI----T-------DVIDFERDLGYDSETRVM 67  Desulfococcus o...
WP_013163150   1 --mkqaacllaalallalpakalalglEVAVGVWSQSPSGD--------I----GyeidssdDRLDLKRDAGFDRESRFT 66  Desulfurivibrio...
ZP_01224086   62 LFIALEHPIPLLPNLRLARTDLEWAGQGTVPAGtrldevvfpieqsvtADLDLSHTEITLYYEV----LDN--VVDLDLG 135 gamma proteobac...
ZP_01078772   58 YGIAFEHPIPLIPNVRIQGTELETDGTNDGTa----------------TEVDMSHTDFTAYYEL----LDGllWLSLDAG 117 Marinomonas sp....
ZP_08621660   65 FGVTLTHFIPLIPNFKFETQELKFTGDYNTFET---------------ISIDLSHETYTLFYAP----FDNd-VVAIHFG 124 Idiomarina sp. ...
ZP_02177290   62 ARAKVE--LPIVPNLYLQYIPMKFEGQKTRTFTyggytf----sgdvkTDVKLDHYDVGLYYNIplvgTATagLLDPELG 135 Hydrogenivirga ...
WP_013325907  64 VWMLIKHPIPVVPNIRLEYTSIHATGKASGSWNglnap------antkSVLDIKEYDIIPYYNL----VDNtfWTTLDLG 133 Sulfurimonas au...
WP_011398659  62 GYVAFEHFVPGLPNLRLQYTELSQNGQGTLTKTfddvtf----tgdvdTDVDLTHTDLIAYWRL----LDN--VVSLDLG 131 Hahella chejuensis
WP_013459051  58 IGLFVEHPVPVIPNVRIDFTPKTSFSGSDGIGGs--------------SKVSVTQTDITPYYEI----LDNa--VEIDFG 117 Sulfuricurvum k...
WP_012676547  63 FRAKLEHPVPVLPNVAFQYMKMDFSGTGRITRSfrygnqvftvgdtvnSSVKMDHYDITLFYNLpfvgLATagILDVEFG 142 Persephonella m...
WP_012173456  68 GRVRIDMPL-IIPNIYVMATPMEFEGTSQQAVEfkfgndtfeadipytSKLSMNHVDVALFYSIplleMATfnRLNIDLG 146 Desulfococcus o...
WP_013163150  67 GRAKLE--LPIIPNIYLQATPMEFSGKGDKSVDfrfgdqtfdadvdfkSKLTLDQYDVALYYGLplagLATlgTVNIDLG 144 Desulfurivibrio...
ZP_01224086  136 LTAR--I--FDGEA-Sl--iGAAQQERVELDAVVPMLYGKAGIDmPFSGLSAAVSGNWINVDEFHLIDWSAQLNYDFSIA 208 gamma proteobac...
ZP_01078772  118 VSFR--Q--YDGTV-------SIAGSETDLDETVPMFYAAPAFSiPGTGLAVVGEFKVGSFDDKDVTDTTIKVKWESPFL 186 Marinomonas sp....
ZP_08621660  125 ASLK--Q--FDGYVaPn--lGMTHQPFWEIDEDVVSAYLKLAAGlPFSGLSVVAEGHFGSFGDNDLHDIQGAVRYRFLDS 198 Idiomarina sp. ...
ZP_02177290  136 INVR--IinFDGKV-Te--lSTNHTESKSVTIPVPMVYAGLGLNlPF--VSLIGELRGITYSGSKYYDITAEARLKPISI 208 Hydrogenivirga ...
WP_013325907 134 LDIK--V--LDLDYkVep-nGLFTGYEDTYTAPIPLVYARVRVEiPTTNIGLEGDAKYVTTGSSTIYDARVKVDYTFNIS 208 Sulfurimonas au...
WP_011398659 132 LQAR--I--FDGEItIkqkgASTNESTTAIDEVVPMLYGAVGVDlPLTGLSVGASLAGLKYSDNRMLDVAARINYEIEVv 207 Hahella chejuensis
WP_013459051 118 VSFK--V--LDATV--------EGTINESLNEVIPMGYLGVALTpPYSPIGMEGSVKYVGYNGDSLTDARIKLVWKIga- 184 Sulfuricurvum k...
WP_012676547 143 LNVR--V--LDFKArVk---SSTVDETATATIPVPMLYGSVEIS-PVSLFSIKAEGRGVAYNGHSYYDLNGELRIKPITI 214 Persephonella m...
WP_012173456 147 INLK--VadLSAEItQp---DTGLSEKEDYVLPIPMAFAAVQLK-PIDLLAIEAEGRGISYSGNHLFNVIGRVKVKpfg- 219 Desulfococcus o...
WP_013163150 145 LNLRfvS--LKAEVdQp---DTGFKESRSATLTVPMLYAGVQIS-PVDRFRLDLEGRYIAYSGNRYLDLVARLQGKIsg- 217 Desulfurivibrio...
ZP_01224086  209 ptl-eaGLSIGYRSMLIEIDDQD--ElQSDAEFDGLFVGLRLLF 249 gamma proteobacterium HTCC2207
ZP_01078772  187 v-----GVEAGYRTHDIDFENVS--GrDVVSKNSGVFLGVNFDI 223 Marinomonas sp. MED121
ZP_08621660  199 laf-dgYLSVGYRSIKIDFDDTTtfMtRYQYDFTGPFASLSIRF 241 Idiomarina sp. A28L
ZP_02177290  209 pgmasfFVGAGYRYERLELDDVG--DvTADIKIKSLFANVGVAF 250 Hydrogenivirga sp. 128-5-R1-1
WP_013325907 209 pvv-qpALEIGYRKQKIKIDENNl-DvKTDMDFSGFFAGLMLRF 250 Sulfurimonas autotrophica
WP_011398659 208 ------GVELGWREMQLELDDVS--DvDADVDIGGPYLGVSVHF 243 Hahella chejuensis
WP_013459051 185 ----glGAQAGYRYESLKVSDHF--DlNSDVTFKGPFVGFNYRF 222 Sulfuricurvum kujiense
WP_012676547 215 plavdfFIGLGYRYERFKIDDID--DiSADIKIKQPYVTAGLLF 256 Persephonella marina
WP_012173456 220 ----pfFIAGGYRYDSIKLDE-K--DlRLDAQVDGFFAETGFEF 256 Desulfococcus oleovorans
WP_013163150 218 ----pfFAAAGWRHQDIKIDAR---DiEGSLKVNGPFLETGFTF 254 Desulfurivibrio alkaliphilus
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