Conserved Protein Domain Family
MSMEG_0570_fam

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TIGR04042: MSMEG_0570_fam 
MSMEG_0570 family protein
This small protein, about 90 residues long, has no detectable homologs outside the set used to characterize this model. Member proteins serve as markers for an eight-gene region whose overall function is unknown. One member of the cluster is a radical SAM protein with some similarity to enzymes of cofactor biosynthesis, another a glycosyltransferase, several hydrolases or oxidoreductases, and several unknown.
Statistics
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PSSM-Id: 274939
Aligned: 30 rows
Threshold Bit Score: 120.446
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_05034976    2 PEINFKIQWPDGKQETCYSPSLVVKKYFESGECYTVSDFVARSREALTIASDRVQAKYGFPCSRAIGQLQRIETTAKRYd 81  Synechococcus s...
ZP_05730105    2 PAMHFVVCWPDGSKDTCYSPSTAIEKHLEVNHPYALEEFVTLSTRALDEASERVKAKFGYFCSSAQDQSAVIVQKARQF- 80  Pantoea sp. At-9b
ZP_02925006    2 PSVNFTIQLPDGVTRECYSPSTVVRTYFQKGEEMTVTEFVSRSREALTEASERVRAKFGFYCTSASAQISDIEHFSKNQ- 80  Verrucomicrobiu...
ZP_05045297    2 PEVHLTLQWPDGSRSQLYSPSTVILQHLPPGRQFTVAELESRGLAALAEASERVRARYGFACTRTDEEARKLQHSLAGF- 80  Cyanobium sp. P...
ZP_01084315    2 PEVHLNVEWPDGRTTVLYSPSTVILNYLQPGQSLAVAELASRGTEALRMASERVRARYGFACTRADEEERQLLQTATVY- 80  Synechococcus s...
ZP_05781274    2 PETYWTVRWPDGAEERLYSPSSVVAELFEPGRSYPVDDFLTRARIAMERASNRVAAKYGFACSSAMAQLDSIETRIAGLe 81  Citreicella sp....
WP_015835359   2 PSVNFTVKWPDGKLTQYYSPSTVIYEYLSIGQRYPSMQFLHQVENGLHAASERVRARYGFFCSSAMDNLALIKRQARLFg 81  Photorhabdus as...
WP_011128285   2 PEVRFQLEWPDGQSSTLYSPSTVILEYLKPGDSFRVSELESLGVRALRAASERVRARYGFACTRTDEEESQLRQWIARY- 80  Synechococcus s...
WP_015819314   2 PAVYFDVAWPDGDCQTYYSPSTVIHQAFEAGDEYPLEDFAARVNSALELASARVQAKYGFACSAAADEQLKINHKIVALr 81  Teredinibacter ...
WP_012829835   2 PEVWMSVRLPDGSTEHCYSPSTVLEARFAVGTRHPAAVFLERIQAVLVEASERVFASRGFYCTGAAAESTRLAQRLAGFv 81  Haliangium ochr...
ZP_05034976   82 aSSDKQVTFL 91  Synechococcus sp. PCC 7335
ZP_05730105   81 -SAQQQVIVE 89  Pantoea sp. At-9b
ZP_02925006   81 -PPEGTVRIL 89  Verrucomicrobium spinosum DSM 4136
ZP_05045297   81 -SAEQLVQIQ 89  Cyanobium sp. PCC 7001
ZP_01084315   81 -ADDQLVHIS 89  Synechococcus sp. WH 5701
ZP_05781274   82 gRDGAEITCL 91  Citreicella sp. SE45
WP_015835359  82 lSPEDQIEVI 91  Photorhabdus asymbiotica
WP_011128285  81 -KPDQNVRVI 89  Synechococcus sp. WH 8102
WP_015819314  82 eQGAAgavtl 91  Teredinibacter turnerae
WP_012829835  82 aDPAAVVEIL 91  Haliangium ochraceum
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