5T4O,5T4O


Conserved Protein Domain Family
ATP-synt_Fo_b

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cd06503: ATP-synt_Fo_b 
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F-type ATP synthase, membrane subunit b
Membrane subunit b is a component of the Fo complex of FoF1-ATP synthase. The F-type ATP synthases (FoF1-ATPase) consist of two structural domains: the F1 (assembly factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha (or A), beta (B), gamma (C), delta (D) and epsilon (E) subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons through the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Candidatus Methanoperedens.
Statistics
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PSSM-Id: 349951
Aligned: 1100 rows
Threshold Bit Score: 45.1211
Created: 8-Jan-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5T4O_I     5 TILGQAIAFVLFVLFAMKYVWPPLMAAIEKRQKEIADGlASAERAHKDLDLAKASATDQLKKAKaeaQVIIEQANKRRSQ 84  Escherichia coli
A9GHS2    78 PFLASVLNFGLLALIVVRFGRKPIAEALKKRKQTITQElDNASRLKQEAELRLEEYEDKLTRLEetlAELKAEHAAQAEV 157 Sorangium cellulosu...
ACY18541 103 PFALMIFNFALVVAILMWKPRHAIKKYTAKRHDEIKAAlAEAGRLRDEARAKLDEYTAQIDQAEkdiDTMVSDIRKTADA 182 Haliangium ochraceu...
AFM26354  36 MLLWRVINTAALIGILIYVLRKPLTSFFSERKAQIQKDlEDARKDRDLAESMIAEYKQKLAGMEqelESMRVELKKSAEV 115 Desulfomonile tiedj...
EAT15603  49 DFLYRVFNFSVTVGILVYFVAKPLKNALAGRREGIEQAlKASQEAAESAESKYAEYDSKLTQAEseiADIQLAIKEEAES 128 Desulfuromonas acet...
OIP89814  32 PFVFQVINFLLLLFVLYKFALPKTKGFFVERSQKINLSlKEAEEAKSFAEKKLREYEAKLIALDkevEDIRNLAQNEGQA 111 Syntrophaceae bacte...
KPK88678  36 DVVWQIIAFAVLLFLLAKMLKKPLGSFLVKRQEEIRSSlEQASQKESEAQRLLGEWEKKLESLSreiQDLHETIRQEGEE 115 Deltaproteobacteria...
OEU50923  26 DFLYRCLNFAIVFGGLGYVLAKPLRKGLGERRAKLIETlQQANRARQSAEAKVAEYERKLADSDreiAELLAQAKEENSR 105 Desulfuromonadales ...
Q2LQZ9    48 NFGWRVLDFIILVGLFYWLLASKVKSFFSGRREEIKTTlEEARLAKEAAEHKFKEYSEKLDKASkeiEGVYEMIRAQGQA 127 Syntrophus aciditro...
ALC18297  48 DFLYRCFNFAVTFGILAYFITKPIRKGLAGRREGIAQAlAQAETARQEAEAKFAEYDGKLAKASaeiEEIYAEIRREGEL 127 Desulfuromonas sp. WTL
5T4O_I    85 ILDEAKAEAEQERTKIVAQAQAEIEAERKRAREELRKQVaiLAVAGAEKIIE 136 Escherichia coli
A9GHS2   158 EKAHVLAEAEQRRVRMRRDAEFRAEQELKAARAMLLQEAvqNAVVAAEELLR 209 Sorangium cellulosum So ce56
ACY18541 183 EKQRILEEAEAQAEAMKRDADQRISAELERARTELEREVvnAAIAVATRLLR 234 Haliangium ochraceum DSM 14365
AFM26354 116 ESAKVIANAERMAATMVESARLAAEQEVRKAKAELKNEAatLAVELAETLIR 167 Desulfomonile tiedjei DSM 6799
EAT15603 129 EKQRIISEAKEMAEKIKAEAQKSADNEVAKARLTLQQEAvtMAVGIAEDILK 180 Desulfuromonas acetoxidans DSM 684
OIP89814 112 EKERIIAEAGKEAESLKKQAKALTEQEVRSAKQELRREVarLSLDKAEKIIK 163 Syntrophaceae bacterium CG2_30_49_12
KPK88678 116 ERKKIVDRAEEEGERVRKQARIIAEHEVKKAQMALKKEMvdLSLELAEKLLK 167 Deltaproteobacteria bacterium SM23_61
OEU50923 106 ERVSILAEAQAAADTVGKEARQCADREIERARQELRAETaqMAISMAEERLR 157 Desulfuromonadales bacterium C00003096
Q2LQZ9   128 EKEKILEDARKAAAKMKEDTQARIEQELKKASQQLRMEAvqLSVHVAEDILK 179 Syntrophus aciditrophicus SB
ALC18297 128 EREKILLNAREMAEKIKQEAEKTAAHEVTKACSELRQETarMAVSLAENLLK 179 Desulfuromonas sp. WTL
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