Conserved Protein Domain Family
LPD1

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pfam18796: LPD1 
Large polyvalent protein-associated domain 1
This is an alpha helical domain with a conserved ExxARxxE motif that is found in polyvalent proteins of both conjugative elements and phages and prophages.
Statistics
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PSSM-Id: 465869
Aligned: 143 rows
Threshold Bit Score: 59.1881
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_076725504    1053 DGRKLDNPYWSSIEEMFARAFETYVQia-leEKFPgfRNDFLVrSdklnhwGDQpylakeKAekqlkesyekygymlsdi 1131 Marinobact...
WP_044013444    2856 DGKEAAHPYWARKQNLAARAFSAYVSdk-leSLGR--KNTLLC-F------KPD------NT------------------ 2901 Treponema ...
WP_076879124     315 LDALKGKPYWNTPTELFARVFETWVIeklkqGNQV---NDFLV-Y------GID------ES------------------ 360  Alkanindig...
OUP80641         531 KEYGKDGGYWDCNAEMSARAFACYIKdklpyR------SDYLV--------GHA------ES------------------ 572 
agres:bpr_II230  460 LFTKNGHGYWSSNCELWARAFDCYISdk-lkAAGI--IDTYLS-R------GAD------SF------------------ 505 
ENA26987        1171 DAEGSRDDYWSNPCEMFARAMEVWFRer-msELGE--RNDYLVrY------DKQ-------------------------- 1215
WP_013631935     241 rilfAEDEYWLRNNEIFARAFEQYILyk-lkQKKV--KDPFLS--------KIK-------------------------- 283  Pseudopedo...
WP_091514940     272 KKNNSTSDYYLRRAEIWARAFEVFVFwe-lkKQEI--ENFLLV-K------SKI------AY------------------ 317  Flexibacte...
WP_090171886     388 eRIKDAPEYWIRNNEIWARAFEAMINqe-lkKQGK--RNRFLA--------SSQ------YG------------------ 432  Lewinella ...
WP_076466021     854 lslqegndalcrgASLFSRAFEAYVEdc-lnDHGV--VNDLLV-L------GAK------NS------------------ 899  Marinobact...
WP_076725504    1132 rqkvseelgessavddrvseilkerEAAhsakrRRQL--------YPSGFERENMKKAFDRLFETLKLKD 1193 Marinobacter lutaoensis
WP_044013444    2902 --------------------------FY-----KTHTpaqgvpkpYPEGAERARINKAFDALFDAQRQFL 2940 Treponema sp. OMZ 838
WP_076879124     361 --------------------------EA-----DAGQwgts-ispYPLHDERQDIIERMDNWMQVMVEHW 398  Alkanindiges sp. H1
OUP80641         573 --------------------------AVafssgENGHldi--ikaYPEGEERRAINAVFDEIVAELKLQN 614 
agres:bpr_II230  506 -------------------------YWE-----ENGImy----raYPAGEERNRINKAFDDLIKHLFVPN 541 
ENA26987        1216 --------------------------KE-----VSAL--------YPSEDHLARINIFMSPWLEAVRSEV 1246
WP_013631935     284 ---------------------------Y-----TPGV--------YMAPNELQAIITPMDNLMKAMAKYA 313  Pseudopedobacter sal...
WP_091514940     318 ---------------------------------PSSV--------YLNEAEMKKIAPLFKKFLAEFKKKT 346  Flexibacter flexilis
WP_090171886     433 -------------------------HPV-----------------YPNKALLKKARASMMAFCRASLSHk 460  Lewinella agarilytica
WP_076466021     900 -------------------------D-------RMGVk------lYPEGAERYRIKRAFDEFITYVm--- 928  Marinobacterium stan...
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