Conserved Protein Domain Family
PRK10966

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PRK10966: PRK10966 
exonuclease subunit SbcD; Provisional
Statistics
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PSSM-Id: 182871
Aligned: 98 rows
Threshold Bit Score: 642.375
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
71279760    1 MRIIHTSDWHLGQYFYGKSRANEHQQFLTWLLAQVTLHNIDAIIVAGDIFDTSTPPSYAREMYFDFIAKLHVTQCQLIIL 80 
114563622   1 MRIIHTSDWHLGQYFYGKSRAAEHQAFMQWLLEQINIHQVDALIVAGDIFDTGTPPSYARTLYNQFIVQIQQTGCQLILL 80 
91793858    1 MRIIHTSDWHLGQNFYGKSRAREHRAFMDWLLEQIALHQVDALIIAGDVFDTGTPPSYARALYNQFIVQMQQSECQLIIL 80 
226943285   1 MRLLHTSDWHLGQHFMGKTRQAEHRAFCDWLVERVREHAVDALIVAGDLFDSGAPPSHAREQYNRFIVALRATGARLVVL 80 
218709616   1 MKILHTSDWHLGQNFYNKSRKNEHERFLQWLLEQVTEHNIDAIIVAGDIFDTSTPPSYAREMYNKFVVDSSKIGCQLVLL 80 
120611304   1 MRLLHTSDWHLGQHFMGKSRQAEHRAFIDWLAAQAAGCQADAVLVAGDVFDTSAPPSHARELYHRAVLALREAGSELVVL 80 
152996378   1 MKILHTSDWHLGQHFMGKSRRDEHKAFIDWLLALVDKESIDAVIIAGDVFDTGSPPSYAREMYHQLVLDMKARQCQLVIV 80 
109899747  30 IKILHTSDWHLGQNFFTKSRKDEHQAFLNWLLNVLQVQKINAVIVAGDIFDTGTPPSYARQMYNQFVVELSKLSCTLVVL 109
209694863   1 MRILHTSDWHLGQNFFTKSRRNEHQKFIAWLLEQVQENVINAVIIAGDVFDTGAPPSYAREMYNQFVVEMNKVNCELIVL 80 
59711774    1 MRILHTSDWHLGQNFFTKSRRNEHQKFITWLLEQVQENAINAVIIAGDVFDTGAPPSYAREMYNQFVVEMNKVNCELIVL 80 
71279760   81 AGNHDSVAMLSESQAVLASLSTRVITQVipaslsedeleEKALSKQVFPLHDADGKTTAIICAIPFVRPRDVIRSRAGQS 160
114563622  81 GGNHDSVSTLNESKHLLACLNTVVIPGA-----------LEHFEEHVFTLKNRQGEAGAILCGLPFLRPRDVVLSESGES 149
91793858   81 GGNHDSVSTLSESKELLACLNARVIPGA-----------FDNISEHVFELNNRKGEVGAIICALPYLRPRDMMLSQAGQS 149
226943285  81 GGNHDSVAMLGESRGLLACLDTWVIPGV-----------AADPAEQLLLLPRRDGAPGALLCAIPFIRPRDVLKSEAGQS 149
218709616  81 GGNHDSVSVLKETQQLLKYMGADVIPNT-----------NEDHATQVVELKGKNGDVEALVCAIPFIRPRDVLTSQAGVT 149
120611304  81 GGNHDSVAVLGESRALLAQLGTRVVPCA-----------ADHLEEQVLVLRKRTGGPGAVLCAVPYLRARELLLSLPGES 149
152996378  81 AGNHDSVSMLNESKSLLTYLDTQVSSQAn----------LEDIESHVIPLKDKKGEVAAWVCAVPYLRPKDVMQSVAGQS 150
109899747 110 GGNHDSVSTLNESKQLLACLHTHVIANT-----------MDNVEQQVIELTDATGRVGAILCAIPFIRPRDVLQSRAGET 178
209694863  81 GGNHDSVSTLNESKQLLAHLNARVIANT-----------NEDLSTQLLTLPNSDGTVGAILCAVPFIRPRDVVTSVAGSS 149
59711774   81 GGNHDSVSTLNESKQLLAHLNARVIANT-----------NDDLSTQLLTLPDNDGGVGAILCAVPFIRPRDVVTSVAGST 149
71279760  161 ASDKQQSLQQAISDHYQYLYQQARKQADAFek--------------teGIALPIIATGHLTALGVsindSKSDSVRDIYI 226
114563622 150 SIDKQRKLGDAISELYQRCFEQAEQLNNTF------------------TTPVPIIATGHLTTVGA----STSESVRDIYI 207
91793858  150 ATDKQQQLANAIAALYQDSFAIAQSIQAKQ------------------QAPVPIIATGHLTTVGA----STSESVREIYI 207
226943285 150 ADAKLQALQAAIREHYRALFALAEARRREL------------------GGALPIVATGHLTTVGA----SASESVREIYV 207
218709616 150 GVERQKQLGDAIKQHYQSVYDAALEKRATFe----------------nSEHMPIIATGHLTAMGV----QQSDSVRDIYV 209
120611304 150 AQDKRQALQQAIRAHYHALFGLARERSESL-------------------GGLPIVATGHLATVGA----SGGEAVREIYV 206
152996378 151 EQDKKLSLLQMIGDFYQRVYEAACEKNKAL------------------KTPVPIIGTGHLTAVGG----QVSESVRDLYV 208
109899747 179 SEDKKLALSDAIKAHYASIFQLAVERRNQLadngngnaaqgirnvsstSVHIPIIATGHLTALGV----SQSESVREIYI 254
209694863 150 GVEKQQALGEAIKSHYHQLYQKALELREEL------------------ALDVPIIATGHLTALGV----KQSDSVRDIYI 207
59711774  150 GVEKQQALGEAIKQHYHQLYQKALELRKEL------------------NVEAPIIATGHLTALGV----KQSDSVRDIYI 207
71279760  227 GSLEAFPASAFPPADYIALGHIHRAQQVAKSEHIRYCGSPIALSFDEAKQD----KRVLMV--------EFTSGK----L 290
114563622 208 GSLDAFNAALFPAADYIALGHIHRPQVVAKSEHIRYSGSPIALSFDELAADnttnKSVFLV--------EFSDAK----L 275
91793858  208 GSLDAFNANLFPAADYIALGHIHRPQKIAKTEHIRYSGSPIPLSFDELNGD----KSVFLV--------EF-DGI----S 270
226943285 208 GSLEAFPTDAFPPAAYVALGHIHRPQQVAGLEHIRYSGSPIPLSFDEARQC----KEVLLV--------DLGEDG----L 271
218709616 210 GNLDGFAADGFPDADYIALGHIHRPQVVAKREYIRYCGSPIPLSFDELKSQ----KQVCVV--------EFVEG-----V 272
120611304 207 GTLEAFPTDAFPPADYIALGHIHQPMKVGGQEHIRYCGSPIALGFDEAGQR----KEVLQV--------DFDLAG----L 270
152996378 209 GTLEALPTSVFPAFDYLALGHIHRAQPISKSGRFRYSGSPIPLSFDELGRD----KTLVMFdtdllgedTFVEDLfaepT 284
109899747 255 GTLDGFAADGFPPADYIALGHIHRPQMVAKSEHIRYSGSPIPLSFDELKSQ----KQVVIV--------AFDQQG----Q 318
209694863 208 GTLDGFAADGFPPADYIALGHIHRPQLVAKSEHIRYSGSPIPLSFDELKSQ----KQVVMV--------EFDKDK----V 271
59711774  208 GTLDGFAADGFPPADYIALGHIHRPQLVAKSEHIRYSGSPIPLSFDELKSQ----KQVVMV--------EFDKQD----V 271
71279760  291 NQVEALIVPCFQPLYMVKTSVDELETSLqetlvafEERQva-----------------------eKF--------PASVK 339
114563622 276 SQITPLMVPVFQPMQVLKGDLDSIEQQI-------STFA--------------------------LQa-------ESAKT 315
91793858  271 PTVTGLVVPKFQPLAVIKGDLAHIETQI-------NRLA--------------------------ADeaieesgnQLNHN 317
226943285 272 EAVTPLPVPCFQPLLTLRGDLAELAGAVv------EAAA--------------------------GG--------SAERP 311
218709616 273 RTICQLPVPTFQPLAEIKGDLSEIESQL-------NQYI--------------------------GL--------DSEQS 311
120611304 271 QAVTALPVPCFQPMASLRGTLQELATAL-------GQAA--------------------------AAg-------TAEMP 310
152996378 285 DPVQLVTIPNFQPMASLKGNLKEVIKQI-------SAL---------------------------EL--------AEDKT 322
109899747 319 RSIAPLDIPMFQPMAMLKGDLESIKTQL-------TAFPlltektsteatrteddgqannlskpqVL--------TSVKP 383
209694863 272 SHITPINVPIFQEMKALKGDLETIEQEL-------AQFK------------------------------------ECEET 308
59711774  272 TQITPINVPMFQQMKALKGDLENIEKEL-------VQFK------------------------------------ECEET 308
71279760  340 AWLDIEIDNGDHLSDLSQRVTELAVDMPFEVLLVRRckkARQRRQAQLSQQDNSTLSELSLTEVFDSRLSqleWQtDEEV 419
114563622 316 TWLSIEVSQQDYLSDLQSRIADMTQDKAVEVLQLKR---ARSQRQQHIKQLDNETLSELSVDEVFGRRLSqeeFEsESQQ 392
91793858  318 TWLSVEVSEQDYLSDLQTRIGELIDGKPLEVLQLKR---ARTARSAQIERVDNEILAELSVTEVFERRLAqeeWSsDDQL 394
226943285 312 VWLEVRVVADEHLPDLPARVAALCAGLPVEVLRIRR---ERGDAVARLCREARETLDELSPEEVFEQRLA---GA-ALDE 384
218709616 312 VWLSIEVQAQDYLSDLQERMRSLTDGLNVEVLQLRR---ARERRNQALEQESAETLSELSPMDVFSKRIAleeFEtDSEK 388
120611304 311 VWLDVEVAGDDYLASLQARIAAMAEGLPVEVLRVRR---ARAGAAPALAPVARETLDELDPAEVFQRRLG---TE-SIDE 383
152996378 323 LWLEVTVIADEYLSDVHKRLLEVIDGKPIELLRVMR---RSAVEKKNESFEARKTLSELTVGDVFQQSLK---SNlELDE 396
109899747 384 TWLCIHVDVQDYLSDLQQSIQTLTEGRNVEVLQLRR---TRTKASQGLNQVNNETLAELTPFDVFEKRLAlehFEgEQDQ 460
209694863 309 TWLCIEVEVQDYLSDLQQRIQTLTQDLNVEVLQLRR---ARNRNEQTLAQEKTETLAELTPFDVFTKRIEqeiFEtEKEQ 385
59711774  309 TWLCIEVEVQDYLSDLQQRIQALTQDLNVEVLQLRR---ARNRSEQTLAQEKTETLAELTPFDVFTKRIEqetFEtEKEQ 385
71279760  420 ARKTRLTQLFTELSVEMKQAASIA 443
114563622 393 AQLGRIKQRFSQVYAEVESERNSQ 416
91793858  395 KKRGRIQAQFQQVLASVEESLIQG 418
226943285 385 ALAGRLRGLHRQVLDELREERA-- 406
218709616 389 ARLERMTVKFKQVMVEVSESAQTP 412
120611304 384 ALRERLAALHGRVLSGLREEGAA- 406
152996378 397 EESKMLTELFQTCLVELEEHQQEG 420
109899747 461 TRLTKIRHTFSEIVEEVRHQEAK- 483
209694863 386 QRAERMTTKFKQILSEVEHKDTDP 409
59711774  386 QRAERMTVKFKQILSEVEHKDTDP 409
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