Conserved Protein Domain Family
RETR3_RHD

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cd22562: RETR3_RHD 
N-terminal reticulon-homology domain of Reticulophagy regulator 3
Reticulophagy regulator 3 (RETR3 or RETREG3), also called FAM134C (family with sequence similarity 134, member C), mediates NRF1-enhanced neurite outgrowth. It interacts with ATG8 family modifier proteins MAP1LC3A, MAP1LC3B, GABARAP, and GABARAPL1. RETREG3/FAM134C contains an N-terminal reticulon-homology domain (RHD) that shows sequence similarity to ADP-ribosylation factor-like 6 binding factor 1 (Arl6IP1 or Arl6ip-1), an endoplasmic reticulum protein that has an important role in cell conduction and material transport. The RHD may function in inducing membrane curvature.
Statistics
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PSSM-Id: 411701
Aligned: 13 rows
Threshold Bit Score: 330.938
Created: 21-Sep-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q86VR2        41 ALVEVLGPYEPLLsrVQAALVWERPARSALWCLGLNAAFWFFALTSLRLVFLLAFGLMIIVCIDQWKNkiwpeiKVPRPD 120 human
XP_005994086  42 SLLDLLGPYEPLLtcLQSVLVWEKPLHSVLVYLGINVVFWFFALVPLRLVFLLAFSMILVVCIDQWKNkvwpeiKVAQAD 121 coelacanth
XP_007899655  27 QLLRLLGHHERLLtyCQSVLVWDRPWHSLLFHLSVNAGFWFLALTSLRLLFLIAFSLIVVVCADTWRNkiwpeiKEERLE 106 elephant shark
Q9CQV4        41 TLVEVLGPYEPLLsrVQAALVWERPARSALWCLGLNAAFWFFALTSLRFVFLLAFSLMIIVCIDQWKNkiwpeiNVPRPD 120 house mouse
NP_080777     41 TLVEVLGPYEPLLsrVQAALVWERPARSALWCLGLNAAFWFFALTSLRFVFLLAFSLMIIVCIDQWKNkiwpeiNVPRPD 120 house mouse
NP_835227     41 ALVEVLGPYEPLLsrVQAALVWERPARSALWCLGLNAAFWFFALTSLRLVFLLAFGLMIIVCIDQWKNkiwpeiKVPRPD 120 human
NP_001348512  41 TLVEVLGPYEPLLsrVQAALVWERPARSALWCLGLNAAFWFFALTSLRFVFLLAFSLMIIVCIDQWKNkiwpeiNVPRPD 120 house mouse
XP_001234118  19 ALRGRLGPYERLLsaAQAALVWERPGRSALWWAAAHGLFWFFALTSLRLVFLVALTLIVVVCLDQWKNkiwpeiGVARPD 98  chicken
XP_007482228  48 ALLDVLGPYEPLLsrVQAALVWERPARSALWCLALNAAFWFFALTSLRLVFLLAFSLMIIVCIDQWKNkiwpemKVARPD 127 gray short-tail...
XP_694371     43 TLLERLGPHERLLtyLQSVLLWERPFHSVLLYTAANVTFWFFALSSLRLLFLLASSLALAVCVDTWRNkiwpkiRVKKQD 122 zebrafish
Q0P4Z1        40 MLQRGLSSYEPVLsyVQAVLVWERPRHSALLHLALNAAFWFFALTSLRIIFLVAFGLMIIICADQWKNklwpelGAARAS 119 tropical clawed...
XP_018096310  41 MLQQSLSSYEPVLsyVQAVLVWEKPRHSALLHLGLNAAFWFFALTSLRILFLVAFGLMIVICADQWKNklwpelGAAKAN 120 African clawed ...
XP_018093781  40 ILQQSLSSYEPVLsyVQAVLVWEKPRHSALLHLGLNAAFWFFALTSLRIIFLVAFGLMIIICADQWKNklwpelGAARTN 119 African clawed ...
Q86VR2       121 ALDNESWGFVHPrllsvPELCHHVAEVWVSGTIFIRNVLLFKKQNPgkFCLLSCGILTFLAVLGRyVPGLLLSYLMLVTV 200 human
XP_005994086 122 EQETESWGFVEPkllsvPELCHHIAEVWVSCTTFLRNLKVFKAQNPgkFCLLVCGVFTFLAVLGRyIPGLLLLYIAMLAV 201 coelacanth
XP_007899655 107 DQDAESWGLVHPkllsvPELCQRIAEIWVNGASFLENLYHFKKQNPgkFCLLVCGVFTFLAVIGRyVPGVLLSYMSLIGM 186 elephant shark
Q9CQV4       121 ALDNESWGFVHPrllsvPELCHHVAEVWVSGTIFIRNLLLFKKQNPgkFCLLSCGVLTFLAMLGRyIPGLLLSYLMLVII 200 house mouse
NP_080777    121 ALDNESWGFVHPrllsvPELCHHVAEVWVSGTIFIRNLLLFKKQNPgkFCLLSCGVLTFLAMLGRyIPGLLLSYLMLVII 200 house mouse
NP_835227    121 ALDNESWGFVHPrllsvPELCHHVAEVWVSGTIFIRNVLLFKKQNPgkFCLLSCGILTFLAVLGRyVPGLLLSYLMLVTV 200 human
NP_001348512 121 ALDNESWGFVHPrllsvPELCHHVAEVWVSGTIFIRNLLLFKKQNPgkFCLLSCGVLTFLAMLGRyIPGLLLSYLMLVII 200 house mouse
XP_001234118  99 ELDNESWGYVHPrllgvPELCHHLAEGWVSWTNFLSNLFVFKRQSPgkFCLLVCGVFTFLAVLGRyIPGLLLSYLLLLFI 178 chicken
XP_007482228 128 ALDNESWGFVHPrllsmPELCHHVAEGWVSGTTFIRNLLLFKKQNPgkFCLLSCGILTFLAVLGRyIPGLLLSYLLLLSV 207 gray short-tail...
XP_694371    123 ESENESWGLVQPgtlsvPELCHHLAEIWVTGSTCATNIVQFKRHNPgkFCVLVCGLFTLVAMVGRyIPGLVLSYAALLGV 202 zebrafish
Q0P4Z1       120 ELENESWGYVHPrllsvPELCYHAADTWVSVYNFLRNLLLFKTENPgkFCLLACSFLTFLAVLGGyIPGVVLSYLLLLFL 199 tropical clawed...
XP_018096310 121 ELDNDSWGFVHPrllsvPELCYHAADTWVSVNNFLRNLLLFKTENPgkFCLLVCSFLTFLAVLGGyIPGVVLSYLLLLFL 200 African clawed ...
XP_018093781 120 ELDNDSWGFVHPrllsvPELCYHAADTWVSVNNFLRNLLLFKTENPgkFCLLVCSFLTFLAVLGGyIPGVVLSYLLLLFV 199 African clawed ...
Q86VR2       201 MMWPLAVYHRLWDRaYVRLKPALQRLDFSVRG 232 human
XP_005994086 202 MLWPLAVYHSLGQRiYAKVEPALSRLDFSVRG 233 coelacanth
XP_007899655 187 LLWPLAIYHSVGQKvYARIEPLLERLDFSVKG 218 elephant shark
Q9CQV4       201 MMWPLAVYHRLWDRaYVRLKPVLQRLDFSVRG 232 house mouse
NP_080777    201 MMWPLAVYHRLWDRaYVRLKPVLQRLDFSVRG 232 house mouse
NP_835227    201 MMWPLAVYHRLWDRaYVRLKPALQRLDFSVRG 232 human
NP_001348512 201 MMWPLAVYHRLWDRaYVRLKPVLQRLDFSVRG 232 house mouse
XP_001234118 179 LLWPLAVYHRLGHRmYMKLEPALQRLDFSVRG 210 chicken
XP_007482228 208 LLWPLAVYHKLGHRlYMRLEPALQRLDFSVHG 239 gray short-tailed opossum
XP_694371    203 LLCPLALYYRLWQRvCVKLEPALQWLDFSAKG 234 zebrafish
Q0P4Z1       200 LLWPLAIYHQLGRRiYQKLEPALQRLDFSVRG 231 tropical clawed frog
XP_018096310 201 LLWPLAIYHQLGRRiYQKLEPALQRLDFSVRG 232 African clawed frog
XP_018093781 200 LLWPLAMYHQLGRRiYQKLEPALQRLDFSVRG 231 African clawed frog
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