Conserved Protein Domain Family
BTB_POZ_TNFAIP1_BACURD2

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cd18401: BTB_POZ_TNFAIP1_BACURD2 
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in tumor necrosis factor, alpha-induced protein 1, endothelial (TNFAIP1)
TNFAIP1, also called BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 (BACURD2), or protein B12, is a BTB/POZ domain-containing protein that is involved in DNA replication, DNA damage repair and cell apoptosis, and is implicated in human diseases including cancer, Alzheimer's disease (AD) and type 2 diabetic nephropathy. The BTB/POZ domain, also known as tetramerization (T1) domain, is a versatile protein-protein interaction motif that facilitates homodimerization or heterodimerization. KCTD family BTB domains can adopt a wide range of oligomerization geometries, including homodimerization, tetramerization, and pentamerization. The BTB domains of other BACURD subfamily members, KCTD10 and KCTD13, form a novel two-fold symmetric tetramer that is distinct from the tetramer formed by voltage-gated potassium (Kv) channels.
Statistics
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PSSM-Id: 349709
Aligned: 6 rows
Threshold Bit Score: 212.433
Created: 12-Sep-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative tetramer interface [polypeptide binding site]
Evidence:
  • Comment:based on the structures of human KCTD10 and KCTD13 BTB domain tetramers

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          ##   # #######   #                    # # # #         #  #  ##          #     
Q13829        26 GNKYVQLNVGGSLYYTTVRALTRHDTMLKAMFSGRMEVLTDKEGWILIDRCGKHFGTILNYLRDDTITLPQnrqEIKELM 105 human
Q5EAX2        29 GNKYIRLNVGGCLYYTTVQVLTRHDTMLKAMFSGRMEVLTDKEGWILIDRCGKHFGSILNYLRDDTIALPKsrhEIKELM 108 African clawed ...
XP_005987540  29 GNKYVRLNVGGSLYYTTVQVLTRHDTMLKAMFSGRMEVLTDKEGWILIDRCGKHFGTILNYLRDDTVVLPKsrlEIKELM 108 coelacanth
NP_001279771  29 GNKYVRLNVGGVLYYTTVQILTRHDTMLKAMFSGRMEVLTDKEGWILIDRCGKHFGTVLNYLRDDSVIIPKsgrEVKELL 108 elephant shark
Q5F3E8        30 GNKYVRLNVGGSLYYTTVQVLTRHDTMLKAMFSGRMEVLTDKEGWILIDRCGKHFGTILNYLRDDTIALPKhrqEIKELM 109 turkey
NP_956093     38 GNKYVQLNVGGNLYYSTLQVLTRQDTLLRSMFSGKMEVLTDKEGWILIDRCGKHFGSILSYLRDGFVNLPKsrqSIMELL 117 zebrafish
Feature 1                                
Q13829       106 AEAKYYLIQGLVNMCQSALQDKKD 129 human
Q5EAX2       109 AEAKYYLIQGLVDKCQTALQDTND 132 African clawed frog
XP_005987540 109 AEAKYYLIQGLVDICQPALQEKKD 132 coelacanth
NP_001279771 109 AEAKYYLIQGLVDVCQAALQEKKE 132 elephant shark
Q5F3E8       110 AEAKYYLIQGLVDMCQAALQDKKD 133 turkey
NP_956093    118 AEAKYYQIQGLIDLCQKELQDNKE 141 zebrafish

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