5CCU


Conserved Protein Domain Family
Glyco_hydro_5_C

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pfam18564: Glyco_hydro_5_C 
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Glycoside hydrolase family 5 C-terminal domain
This is the C-terminal domain of endo-glycoceramidase II (EGC), a membrane-associated family 5 glycosidase pfam00150. The C-terminal domain assumes a beta-sandwich fold, which resembles that of many carbohydrate-binding modules.
Statistics
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PSSM-Id: 436581
Aligned: 112 rows
Threshold Bit Score: 48.3907
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5CCU_A       394 RTYPQATAGEPGRMIFDADNGDFAYRFT---PRAATRPTEIFVSD-LHy-pDGYAVQVD--GG----QVT-SAP-GARIV 460
EOD13773     427 RPYAPLISGKPIAWHYDADSLAFTLRYVcgsSAA---PTVIFAHKaFHf-pHGVCISISpsEAa---RWE-----QPSEN 494
KJE93438     412 RTYPQAVAGKTFHYSYDVATRIFILEYYvnaACKL--PTDIFLAEdVHy-qNGYTVSVN--PS----NVV-TQSsIKNHV 481
KJE97390     439 RSYPHAVAGTTTSFHFAAATAVFVLEYTvdtTCTL--PTDIFVAEsVHy-vNGYTVDIT--PA----NVVkMTS-STNHI 508
EGG14323     386 RTYPQYVSGTTKSMSFNTTSGEFSMVYTmnpNIQE--PTEIYLNEnVHy-pNGYTFTVS--PS----KDV-VIA-STQTN 454
KNC51965     385 RTYAYATAGVPRDMMFDAETGAFKFVWDs-wGHTIGLPTSIYLNEaMWy-pHGYSVTFIprDGa---SYS-----SPTRN 454
ELR22285     391 RTYARAIAGTPTAMNFDPETSVFQLTYIlnlKVSQ--PTEIYLNEeYYy-aNGYVVSVV--PSqivqAKS-PGK-NLVWV 463
XP_001018205 407 RTYASAIAGKSINQYFNNTSGEYQLEYRlciECGQ---TEINYNA-EHyypQGFNIQIS--GNa---SYI-L---TSDQV 473
Q55CF6       419 RTYAQAIAGVPLSMSFNPANSDFSFSYNintTITQ--PTQIYLNQdIYy-pNGFTTNII--TG----TAT-VSIpQKNLI 488 Dictyostelium d...
EFA85830     414 RTYAQAIAGSPQKMTFDIQTASFTFSYEidtSITQ--PTIIYLNEaMHy-pNGYTASIT--TG----SAQ-ISSpSTNTI 483
5CCU_A       461 TVV-ADGSG-P---VTVKI 474
EOD13773     495 VVEvWHQSSsAgaeVEVAV 513
KJE93438     482 YLT-PTSSAsNgkfVTVVI 499
KJE97390     509 FLS-PVSSSsNgkfVTVVV 526
EGG14323     455 RLLlTNNNNqPid-vTITI 472
KNC51965     455 HLDiVPASTfPds-sTLTV 472
ELR22285     464 YAL-PTA-T-DgatITITI 479
XP_001018205 474 FVI-PNSNSkNnevISVKI 491
Q55CF6       489 YIL-PNSNTiNqstITITI 506 Dictyostelium discoideum AX4
EFA85830     484 NIT-PTTSTlNgqlITIEI 501
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