Conserved Protein Domain Family
M1_APN_like

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cd09604: M1_APN_like 
Peptidase M1 family similar to aminopeptidase N catalytic domain
This family contains bacterial M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.
Statistics
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PSSM-Id: 341067
Aligned: 246 rows
Threshold Bit Score: 288.405
Created: 16-Sep-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteactive site
Feature 1: Zn binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:H H EClick to see conserved feature residue pattern help
Evidence:
  • Comment:the zinc ion is tetrahedrally co-ordinated by three amino acid ligands and a water molecule

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                      
CCH57212    38 YQIQVALDPTtkkLNGRETLVWRNpsndvIRELRFHLYlnafrneqttfmresgg------------------------- 92   Fibrisoma limi B...
OEF98207    74 YVIKAQLNPNkavIHGIMTVKTSLp---aSNNLVFNNYppf--------------------------------------- 111  low GC Gram-posi...
KPL20816    74 YQMDLRIADDlleLDGRQAVRYTNrtaeaLAEIYFRLYpnl--------------------------------------- 114  Anaerolineae bac...
KTB49147    65 YHMDLTIDSSlqtIGGRLQVRYTNregeaLTEIYFQLFpns--------------------------------------- 105  Dehalogenimonas ...
YP_429599  146 YDLQARYDPAsgeIQGELLLAYQNpfltpLRQLNFNLPanap-------------------------------------- 187  Moorella thermoa...
CUS03830   110 YQMAIEIDESlaiVRGRQTVFYTNledtpLDALYFHLHakt--------------------------------------- 150  Ardenticatena
KUK46700    65 YTLAIELVEPyavIEGQEKITYFNnedveLNEIYLRMFpnngg------------------------------------- 107  Anaerolinea ther...
OAI55192    43 YDLDIQLDVAgheAKIREKVTWTNrhdrhATELVFNVHshyqipddeigflakmaeilrmaphesmdfdgppcqvsqvrl 122  Planctomycetacea...
ADV61202    39 YHLKARLDPVagrLDAVQKVRFVNrtsraTRELVFHVYpryippnrgtgllvkt-------------------------- 92   Isosphaera palli...
AMV24997    47 YDLDISIDDTthrATIRERVTWINttktaTDQLVFNFYphfqvpagesll------------------------------ 96   Gemmata sp. SH-PL17
Feature 1                                                                                      
CCH57212    93 -----------------------------qlrgteidrdtkenpyGSIDVTsmkvrggetla------------------ 125  Fibrisoma limi B...
OEF98207   112 -------------------------------------------nmNNMSIDevrvfd----------------------- 125  low GC Gram-posi...
KPL20816   115 -------------------------------------------fgGLAEVQsvtvndr---------------------- 129  Anaerolineae bac...
KTB49147   106 -------------------------------------------agGSVTISevrldgr---------------------- 120  Dehalogenimonas ...
YP_429599  188 -----------------------------------------fgngASLAVTravvnn----------------------- 203  Moorella thermoa...
CUS03830   151 -------------------------------------------lgGLITVTdvtvdgt---------------------- 165  Ardenticatena
KUK46700   108 ----------------------------------------dlmhvSGLKVTgvets------------------------ 123  Anaerolinea ther...
OAI55192   123 isslrpeevqqaagrarqptaqppapqwpgtvrqvkhdepdhgqpGPLTFHwk--------------------------- 175  Planctomycetacea...
ADV61202    93 -----------------------------feflrvdpdigfdrrgDRITFQrvavngqpvpfgfnddarqepddpahrhk 143  Isosphaera palli...
AMV24997    97 ----------------------------------faktlellrlqPSLGIDrhgkagnvssahlla-----------ans 131  Gemmata sp. SH-PL17
Feature 1                                                                                      
CCH57212   126 --yqfiqpddgnRDDRTVIRVPlskpv-----gpgeTITLDITFQAKLPki----faRTGYSRDYf---lVGQWFPKIGV 191  Fibrisoma limi B...
OEF98207   126 -------qevnfQFNNNRLTIPlnlseeeiyrasadNLSVEIAFTTKVPql----gtRFGVKDDIw---lLTTWYPLLGV 191  low GC Gram-posi...
KPL20816   130 ------evepgyELLNSALRVPlsppl-----essrQTVIEMTFSVDVPagg---egNYGMFGLQegvlaLAHFYPMIPV 195  Anaerolineae bac...
KTB49147   121 ------pveaavISGGTTLRVPlvrpl-----qpgaAVTAQLDFTVAIPrslggntgLFGYFNGIl---tLDCFYPVIPV 186  Dehalogenimonas ...
YP_429599  204 -------rpvavHFKGSRLEVPlpral-----apreTLSVVLSFKTIVPpg----dmRLGRDGNLs---tVSGWYPILAP 264  Moorella thermoa...
CUS03830   166 -----aviaddtINHLLRVPLPapla-------pgaATAVAMNFTTIVPtei---grNYGVLAYYeevlaLAHFYPMLAV 230  Ardenticatena
KUK46700   124 -------felefNNTAVRVDLPtalq-------paeSVYLDITYDVQVPtdf---ggNYGLFSYIdgvlaLDQIYLIIPI 186  Anaerolinea ther...
OAI55192   176 ----------edNNTALVIPLPspvs-------pgeSVTVELEFTLRLPqk----qgRWGQWKGVt---fLSNCLPVLAF 231  Planctomycetacea...
ADV61202   144 lhpphhaaepinDGTLMSIALPeple-------phaAVVVELAWTLDLPnt----wgRWGRWEGVt---tLANWYPVLAV 209  Isosphaera palli...
AMV24997   132 aptplsysydekNTTALRFSLPnavq-------pgqSVTIELVCDILLPnk----qgRWGYYEGVt---fLTNALPLLAV 197  Gemmata sp. SH-PL17
Feature 1                                                                                      
CCH57212   192 YEPagtryaktgQWNCHQFHAhsef--yadYGVYDVAITTPknYWVGATGlmVGENmganntKTIRWHAEd--VVDFAWT 267  Fibrisoma limi B...
OEF98207   192 KNQh-------nQWFTRPIPVgfgdpfyfeHADYDVYLLAPdnIKWVTSGslVSQTtlennlVKYHWQEEt--IRNFALV 262  low GC Gram-posi...
KPL20816   196 HDDe--------GWNVEIPSPqgdv-vfadSSFYLVRVNAPtaLTMVASGveSERRavg-grQEVTYAAGp--VRDFYLA 263  Anaerolineae bac...
KTB49147   187 NDDs--------GWHIGPAPGggdh-tfldTSFYLVRVRAPasLTLAASGveTARSvdg-adQVVTFAAGp--ARDFFLA 254  Dehalogenimonas ...
YP_429599  265 PTEd--------TWAGVAGTAygdp-yfagAAYYLVRLTLPsgYQVLASSrlTGRQerg-ewTDWSFNSDq-pVREFAFT 333  Moorella thermoa...
CUS03830   231 YDAt--------GWNTVEPDVqgdl-tysdAAFFLVEVTAPanVTLVGSGaiVAETtqg-dtQTITYAVGp--ARDFYLA 298  Ardenticatena
KUK46700   187 YDDe--------GWNVEIPATngdm-vyadPAFFNVTVTAPseLVIAASGvtVDKQed--gaTTIHTILAg-pERDFYLA 254  Anaerolinea ther...
OAI55192   232 YDDk--------GWQPTPFIPwhqp-wfneAGVYHASLTLPedEKVACTGsvSQTEnlgdgrKRLEISVPa--ARDFAII 300  Planctomycetacea...
ADV61202   210 LEEs--------GWDRSPFVPwhqp-wyqeAAWYEVELTLPsdHVVASTGtiVERCdeadgwQTLTLRTTrnpARDFALT 280  Isosphaera palli...
AMV24997   198 CDDg--------GWKPMPFVPwhqp-wyneAGVFRATVTVPenEKVACSAviKSEQklpgnkKKVLFEPFl--GRDFAVL 266  Gemmata sp. SH-PL17
Feature 1                                                                                      
CCH57212   268 ASPh---FQVVtgkwqprsgGPVSIellmq--pehmDQAQRHMDAAIAALAYFDKy----VGKYPFPNLTVVDPpfhasg 338  Fibrisoma limi B...
OEF98207   263 GSKh---YTISela----mdDGVTIqi--------aLTSDRYLETTKQILEYSYPlfkdvFGALPYNTLSVAETsw--gt 325  low GC Gram-posi...
KPL20816   264 ASMd---YVVVsg-----qlGETTIssyap--pelrAGAEAALRYTVEALRILGEr----LGAYPFTEFDVVATpt---q 326  Anaerolineae bac...
KTB49147   255 GSDk---YAKVsa-----tsGETTInsyyl--pgleGGADTALKTAAEALETFNRr----LGEYPYTELDIVPLplq-gg 319  Dehalogenimonas ...
YP_429599  334 AAPdw-qFTTRq-------aGRVQLvva-----srgEMAPAVLDVAARALEFFQKl----YGPYPYSYLHIAFVpl--dn 394  Moorella thermoa...
CUS03830   299 AGD----FAVTsa-----tvGETTInsyap--sdmsQGAALALEVAAAALTSLNEr----LGSYPYTELDIVTTpt---s 360  Ardenticatena
KUK46700   255 ASEa---FVVKse-----qvGGTLVssyyl--adypDGGEYVLGVGVDALQTFNEy----LGTYPYTELDLVGTpm---q 317  Anaerolinea ther...
OAI55192   301 TSNr---FVEIgg-----pvGPVKAkvlal--pehqDYARAMFQIIADAMPVYAMw----FGPYPYQEFTLVESyf---g 363  Planctomycetacea...
ADV61202   281 ASAr---YITLeg-----qaGRIAVkvhvl--pgreANGQRALQSALEVLPLYEQw----FGPYFDDEFEIANAff---g 343  Isosphaera palli...
AMV24997   267 SSAryqeFTSStk-----lpDGREVklrclafaqheFYATEILKIVGEAISTFSQw----FGPYPYSQFTVAESyf---g 334  Gemmata sp. SH-PL17
Feature 1                                            #   #                  #                  
CCH57212   339 SAGMEYPTFITAGTawglp--------dgarfPEVVTVHEFGHQYFMQLLASNEFeEAWLDEGFNQYYEGRIMDEtygpn 410  Fibrisoma limi B...
OEF98207   326 NFALEYPNLAIYSKdlys-----------qgnHEHWLVHEFAHNWWYNAVGNHEItDGWIDEGLVEHAVVLYLEHrygre 394  low GC Gram-posi...
KPL20816   327 AYGIEYPGITAMALrlypprd-----eyppayLESTIAHEVSHQWFYSTVGNDQLdEPWLDEALAQYITLLYWQDlygvp 401  Anaerolineae bac...
KTB49147   320 GIGIEYPGIFGVAAsvyp----------leltLKTTVVHEAAHQWFYNAVGNDQInQPWLDEAVSQYFTGLFFLDtegpa 389  Dehalogenimonas ...
YP_429599  395 LAGMEYPGLLLLSNrk--------------pyNPAVVVHEVAHQWWYNLVGNDTRqAAWIDEGLAEYSTLLFYRHfdpgl 460  Moorella thermoa...
CUS03830   361 ALGIEYPGLIVGTLrmydteltsqsgmsyadiLESTTAHEVNHQWFYNLVGNDQLdEPWLDESLTSYSTYRYYADrygqe 440  Ardenticatena
KUK46700   318 AGGMEYSGIVALGLqyydpqavf-sgmsaftlLESATAHEVAHEWFFNMVMSDQIdEPWIDEGMAQFLTGLYFEDnygtt 396  Anaerolinea ther...
OAI55192   364 WLGNECGGLVMIDErvfdap------klargyVEYLVSHEVCHQWWYNVVGTNGYaETWMDEGMATYFAHRLIDHkrgkn 437  Planctomycetacea...
ADV61202   344 WNGNECAGLVLLDDrvfrmp------gmlapyLDHLVTHETCHQWWWNVVGTHGYaETFMDEGFVNALTQIRLTAknggs 417  Isosphaera palli...
AMV24997   335 WNGNECGGLIMVDDrvfgmp------hlargyVEYLVSHETCHQWWYNMIGTNGFtEPYLDEGAAAYFTHRLIDTkhgkn 408  Gemmata sp. SH-PL17
Feature 1                                                                                      
CCH57212   411 ssqidllgf----------------rmgdlessrdsyvHLDNPAIGSSFGNTWqlpqgyygvLTYSKTATWLRTLEGLVS 474  Fibrisoma limi B...
OEF98207   395 rgqelrnyf---------------rnqnrqlinrnplmRMNKTLMDFQTQSDFf-------nSWYYRSADMFLTLREELG 452  low GC Gram-posi...
KPL20816   402 ggegfrds-----------------llerwarvdnadiPIGMPVQSYEGREYGa--------IVYGRGPLFIEALAQRMG 456  Anaerolineae bac...
KTB49147   390 gwnrslte-----------------wrnfwnragstpiPIGLAVGDYSLNRYGp--------IVYGRGPLFLNALAAEIS 444  Dehalogenimonas ...
YP_429599  461 yqakla---------------------eitqlaartgaPINLPLEEYGSEQDYr-------qAVYNRGAMFWLELERMAG 512  Moorella thermoa...
CUS03830   441 aadnyfnm-----------------fegrwamvegeeiPVGMPVAEYEEAEYSa--------IVYGRGAVFLRLLEKTIG 495  Ardenticatena
KUK46700   397 sarsyrds-----------------wdyrwervghepiAIGLPVREYEDIAYSa--------IIYGRAPLFIHELRQKMG 451  Anaerolinea ther...
OAI55192   438 nnllqypawlewlpni--yrenyryyglygtlgrgdygPTVQEIPKFGQIVNLf-------sMTYDKGAKIVGMIEDRLG 508  Planctomycetacea...
ADV61202   418 nssliewpagfkwlpvvgrrdyrlsghygwrargggpaPVIQNMTEMGNLETLf-------tLAYDRGGMVVDQIRNRMG 490  Isosphaera palli...
AMV24997   409 ntflawpkglewlpni--yrenyrngsmyhairnnempPAAQELPQYKHLFGLf-------tGAYDRGSRVFGMIEDRLG 479  Gemmata sp. SH-PL17
Feature 1                                                           
CCH57212   475 RRVMDEIMQTYFNRWKFKhPCADDFIAIVNEivpkrlgskYGPDMNWFFDQVL 527  Fibrisoma limi BUZ 3
OEF98207   453 EIKYNYFLRTLFENNIGSiIDIEDLNRVLRE---------TIKGNHQYFDTWV 496  low GC Gram-positive bacterium strain AHT28
KPL20816   457 QSVFDAFLRDYYVTHKWGiATADSFQELAEQh--------CRCDLGALFDEWV 501  Anaerolineae bacterium SM23_84
KTB49147   445 QSAFEECFRGYYQANIWGiTTTASFQAWFEAc--------SGKDLDAIFSVWV 489  Dehalogenimonas sp. IP3-3
YP_429599  513 EEQLKEALAYVQRYYRYEiIPPRALLTIITY---------YGKLDSNNFSPFL 556  Moorella thermoacetica ATCC 39073
CUS03830   496 RETFDAFLRDYIQQFRWRvAGTAAFRALAEEh--------CACDLGPLFAAWV 540  Ardenticatena
KUK46700   452 DEVFFNFLRTLFLENKWDvLTTEEFRVTAEQa--------CDCDLQQEFDNWV 496  Anaerolinea thermophila
OAI55192   509 EAAFFDFMHTVYDKYYFKiMRVADFEQELEHy--------TGHTWEPFFQDWL 553  Planctomycetaceae bacterium SCGC AG-212-F19
ADV61202   491 DDAFFELLRRIYRRYAFRiLRYDDFKRELDAf-------dPLGDWPTFLEAWL 536  Isosphaera pallida ATCC 43644
AMV24997   480 EAAFFDFIRGIVKKYSWSiLSSELLRAELEAy--------TGRDWGEFFQRWV 524  Gemmata sp. SH-PL17

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