Conserved Protein Domain Family
LPD3

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pfam18798: LPD3 
Large polyvalent protein-associated domain 3
This domain is predicted to adopt an alpha and beta fold. The secondary structure arrangement suggests it to be a member of the BECR fold. The domain is found in polyvalent proteins of both conjugative elements and phages/prophages.
Statistics
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PSSM-Id: 436745
Aligned: 77 rows
Threshold Bit Score: 56.1703
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
KGF46879      119 KMKNSELANYLRDKF-KGI----AFSKD-----KLA---TLGI----KDYkGAQHIAWnltHK------NRAIHRSLLDN 175 
EHL68589       78 SFYREAMGNLFGGRAvQVE----NVRFE-----DQPy--DVTL----NTK-VISKVISdphL--------TAEKLAVFRH 133 
WP_090702875  543 KALRGAARTYLESK--RGK----WVKCPampndENGnvrEVEL----RQR-GIDEFIRy---S------AKSEKLKLAAK 602  Nitrosomonas ...
WP_095061936  323 KALREAAKGFLQ-GL-RGK----FIRNI-----ALDr--DVEI----RQR-GIKEMMR---FS------GNEKKLKLMSA 375  Kingella nege...
EFG30476      714 KQLRQATREHLE-RL-RGK----WIFNH-----HLDa--DIEI----RQR-GIDEMIR---YS------ANPVKLQILAN 766 
CDC32157     1181 VYIQKKVLTALNNENfFNQnnknIVVNA-----DTDi--VVSI----TKN-GIRETLStekRyvklprkIKIAKIAVIDN 1248
Q5F7S8        946 REYKRNALEY-GKSL--RG----PYVNK-----DTGr--EISL----GRS-GITEILR---Hd-----yKDAEHLQSIAA 998  Neisseria gon...
OOH91830     1450 RQYKRNALNY-GKTL--RG----SYVNK-----DTGq--EISL----GLS-AVKEVLN---Hd-----yKDPDHLQSISA 1502
WP_036847368 1439 KQYKKNAFEY-GKSL--QG----VYVNR-----DTGk--KISLqrgrKRG-GLNEVLQ---Hd-----yKDTEHLQSIAA 1495 Porphyromonas...
BAK99578      542 KDLTTQVTEYFNS---VGG----VAFNP-----QLG---DVKL----TRS-GAKSDIAh---G------IGRKKAAAFAA 592 
KGF46879      176 LKSVVENAV----LVEsAKN---RkKDftapvsNAQkrkneVEYYHRFYVPVSINGKIYVVRVVGEE-RHGnitvnptsl 247 
EHL68589      134 IENVVRNAE----YLGsGQYtahGaKT------KP------ATRYDYFETQAIIGGQEYTVSFDVEVyPDR--------- 188 
WP_090702875  603 IEEIIETAF----NAEtETN-----FKpe---kKPS-----SIAYYRLKNRVAIDGEAHDVTVLIEQdLQGy-------- 657  Nitrosomonas ...
WP_095061936  376 IEQIIATAKpdgaNPLrENE---K-KDk-----KPE-----VLNYFHMTNHASIDGEQVGFRVIFEEdANGv-------- 433  Kingella nege...
EFG30476      767 IENLIATAKsv-gSGFeVNG---K-QAe-----KPH-----IAHYFRLWNTSKVNGESFPIQIVIEQdEKGl-------- 823 
CDC32157     1249 LPDMIRYAE----VVNeNEK---N-YH------SKE-----GSPFLVLSHPAIVDGENYNVEIKIKKtPVEn-------- 1301
Q5F7S8        999 IPQIIENAV----YID-TLP---N-EDla---kNGD-----IQGYEYYVSGLNVGGADYTVRAAVAVsRNGn-------- 1053 Neisseria gon...
OOH91830     1503 IPQIIENAI----YID-TVQ---N-EDtn---kNPN-----ITSYDYYLAGLNIGGDDYTVRAVIANaNTGe-------- 1557
WP_036847368 1496 IPGIIENAI----YID-SAD---N-TDr-----KVN-----AQSFDYYVVGIQIGGVDYTVRAVVVNtKSGe-------- 1548 Porphyromonas...
BAK99578      593 VPDVIEQGR----VIDyETN---W---------KGR-----QYDTAVVAAPITIGGEPYLAGVVLTRnQREn-------- 643 
KGF46879      248 DLY 250 
EHL68589      189 NNY 191 
WP_090702875  658 LHY 660  Nitrosomonas aestuarii
WP_095061936  434 LHY 436  Kingella negevensis
EFG30476      824 LHY 826 
CDC32157     1302 KFY 1304
Q5F7S8       1054 RYY 1056 Neisseria gonorrhoeae FA 1090
OOH91830     1558 RYY 1560
WP_036847368 1549 TYY 1551 Porphyromonas sp. COT-108 OH1349
BAK99578      644 NFY 646 
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