Conserved Protein Domain Family
SLC5sbd_u3

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cd11479: SLC5sbd_u3 
Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain
SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.
Statistics
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PSSM-Id: 271373
Aligned: 23 rows
Threshold Bit Score: 482.103
Created: 15-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Na binding site
Feature 1:Na binding site [ion binding site]
Evidence:
  • Comment:based on the structures of Vibrio parahaemolyticus vSGLT (SLC5), Aquifex aeolicus LeuT (SLC6), and the NCS1, Microbacterium liquefaciens Mhp1, bound with Na+, functional studies of Escherichia coli PutP (SLC5) and mammalian NIS (SLC5), and mutational analysis of vSGLT
  • Comment:one of two Na+ binding sites in Aquifex aeolicus LeuT, where it is referred to as the Na binding site 2

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                       #  #                             
NP_826461      3 VDYTVIVVYLAGMLAMGWWGMRRAKSKSDFLVAGRrLGPAMYSGTMAAIVLGGASTIGGVGLGYKYGLSGAWMVFAIGLG 82  Streptomyces av...
YP_643359      5 IDYLMIIAYFALMLAAGYWGYRRAKTADDFLVAGRrLGPVMYLGTLSATTLGGASTIGGVALGYQFGVSGMWLAAMIGLG 84  Rubrobacter xyl...
YP_001125932  23 LDTGVLLCYFLVLVVAGILGARRAKTAEDFALAGRnLGLFVYLGCLSAVILGGASTIGTAKLGYQFGISGMWFVFMIGLG 102 Geobacillus the...
AEF44724       3 LDLLVVVFYFLMIGAVGWLGVRRATTKEDYLVAGRnLGPGLYLGTLSAVVLGGASTIGSVKLGYTYGISGAWLCGALGAG 82  Serratia sp. AS9
ABG05816       5 LDYLVIGLYFAAMIAAGYWGLRRARSADDYLVAGRrLGPLLYIGTLGAVVLGGASTIGTVALGYENGVSGMWLVFMIGLG 84  Rubrobacter xyl...
EEL87156       4 VDILLMAGYFIIIIGIGLIGARKAKTSEDFMVAGRsLGLVMYLACLAAVILGGASTIGTARLGYEFGISGIWLVVMIGIG 83  Bacillus cereus...
ADV06846       4 IDFIVFIIYFAALISVGIIGVLKAKSSEKYMVADRnLGLWMLFGCLTAVFLGGSSTIGTSQLGYEIGLSGFWFVFSLGVG 83  Staphylococcus ...
ACV56658      21 IDYVIIALYFIVIVAIGFIAARFAKTKEDYLVAGRrLSFPLFFGCMAALTLGGGSTIGSAQLGYEFGLGGIWLNLSIGLG 100 Eggerthella len...
ADK14455       5 FDYGIIILYFIVMISIGIISTKFTKTKEDYLVAGRrLGFPMFFGCMAALAIGGAATVGGAKLGYTFGVSGIWLAGSLGLG 84  Clostridium lju...
EEZ61176       4 LDIGIVIGYFLVIIAVGVYSSRKAQASSDYLVAGHrLGYGITFACLSAVLLGGASTIGSTALGYRYGISGIWLVSMLGLG 83  Slackia exigua ...
Feature 1                                                                                        
NP_826461     83 LLALSVFFSARIARLKVYTVSEMLDLRYgGRAGVISGVVMWAYTLMLAVTSTIAYATIFDVLFDMNRTLAIILGGSIVVA 162 Streptomyces av...
YP_643359     85 AAALSLLFSSRLANLGIISFSDVLELRYrRAAGLFGALVMGVYEVMVVVTQVLAIGTLFDVVLGLSPTLAIVAAGGIVLL 164 Rubrobacter xyl...
YP_001125932 103 ITVLGLFFTNQIYGANVTTISELLGRRYnQETRLISALVAAIYTLMVSVTQVIGMGTIIHAVLGWDMTVSMLVGGGIVLF 182 Geobacillus the...
AEF44724      83 IVVLSTVLAKPLLQLKLYTVSQVLARRYhPAARVTSGAIMLAYDLMVAVTSIIAIGSVMQVMFELPFATSILLGGGLVVL 162 Serratia sp. AS9
ABG05816      85 IIALGLLLSTRLSRLGVYTVSEMLGLRYgPSARLISAIIVASYALMIAVTSTIAIGTVFDVVLGLPPAVAILVAGGVVVA 164 Rubrobacter xyl...
EEL87156      84 IILLGIFLVKKVSRFKIITISELLGLRFnSQTRVITSLITFIYVTMITVTQVIGMGTILNVLLGWDIKLCMLLGGSVVVM 163 Bacillus cereus...
ADV06846      84 ITIFGLFLLDRIMDLQVITISELLYRLFgHRVRVMGAVVTAMYTLMICVTQVIAMGAVVSQIFHWPMMTAILVGGSIVFV 163 Staphylococcus ...
ACV56658     101 LVAAGFLVTSKLSKLRALSVNEVVESSYgPIARVFSSALTLIYTLTLSVVQVISIGTIINGVTGIDATLSMLVGGGIVIL 180 Eggerthella len...
ADK14455      85 LIALGFLVSSKLSKMKALSINEVIENNYgKSARIFSSLLTFVYTMMMSVVQVVSVGAIISGIMGWNTQISMLVGGGIVIF 164 Clostridium lju...
EEZ61176      84 LMLVGILLVKRIRELEVLTVAELLTKRFgAKAGVVTALVSALYTMMVCATQVIAMGTILQGFAGWDSAISMLVVGVVVVA 163 Slackia exigua ...
Feature 1                                                                                        
NP_826461    163 YSTLGGMWSITLTDMVQFVVKTIGVLLLLLPIAIVKAGGFSAMKAKLPTEYFDPlgIGGETIFTYVLIYTFGMLIGQDIW 242 Streptomyces av...
YP_643359    165 YSVAGGMWAITLTDIIQFVVMTVGIFFLLLPLALSQAGGLGGLRAELPASYFDLtaIGGQTILAYFLSFFLGIMIGQETW 244 Rubrobacter xyl...
YP_001125932 183 YTILGGMWSVTMTDIIQFIVMTIGIFFIMLPMSLSHVGGWESLLDQLPASHFDLtsMGWANIFQYFLLYTLGMVVSQDIW 262 Geobacillus the...
AEF44724     163 YSTLGGMWSLTLTDIIQFIIMTVGMMLVLMPMSIVKAGGWEAFSNLLPAGYYQLssIGLDTILVFFLIYFFGILIGQDIW 242 Serratia sp. AS9
ABG05816     165 YSVAGGMWSITLTDFLQFCVMTAGIFLALLPLAVARAGGLSGMRAELPASYFDLasIGWGTIFTYFLLFFFGLMIGQDIW 244 Rubrobacter xyl...
EEL87156     164 YTLLGGMWSVTMTDIFQFIVMTIGVFAIMLPLSLDKAGGWSALQEKLPHSYFEIanIGGDKIFSYFLLYCLGVLIGQDIW 243 Bacillus cereus...
ADV06846     164 YTILGGMWTLSITDVIQFLVMTIGIFCIMLPMSLHSVGGLTTLIEQLPASHLSFfnIGVGEIVNYFVTYTLGVMVGQDIW 243 Staphylococcus ...
ACV56658     181 YTFVGGMWSVTMTDIVQFVVKTVGILILAPIFCISAAGGWDALVSKVPEAYLSVgsMGFDKSFAYLVLYVPGLIIGQDIW 260 Eggerthella len...
ADK14455     165 YTFIGGMWSVSMTDIIQFVIKTLGIVILIPIFAIVKMGGIHHILTSVPQSHLSItgIGYDSIVMYLLMYIPGLIIGQDIW 244 Clostridium lju...
EEZ61176     164 YTILGGMWAITLTDFIQFILIVAGVTLVMMPACVHAAGGLSAIGATLPSSYFDItsIGFPTIVQYFFLYCLGALVGQDLW 243 Slackia exigua ...
Feature 1                                                                                 #  ##  
NP_826461    243 QRVFTARSDTTAKWGGTVAGTYCLVYALAGAVIGTAAKVLYPTLpsADSAFATIVKDELPvGVRGLVLAAALAAVMSTSS 322 Streptomyces av...
YP_643359    245 QRVFTARSGSVARWGGLLTGLYCVAYAFAGALVGCAARVLLPDLanPDNAFAQVATTVLPvGVQGLVLAAALAAVMSTAS 324 Rubrobacter xyl...
YP_001125932 263 QRVFTARTKKIARSGAVYAGLYSVAYALVLSVIGMCGVIVFPNIgdPQNVFASMSLQMLPhGLLGLILASVCSALMSTAS 342 Geobacillus the...
AEF44724     243 QRVFTARSANVARYAGLGAGLYCVLYGVTGALIGMAGKIVLPQLanTDGAFAAIAQAVLPaGISGLVAAAALAALMSTAS 322 Serratia sp. AS9
ABG05816     245 QRVFTARSAPVARWGGLVAGLYCLLYGLAGALIGTAARALVPDLqvADNAFARVATEVLPaGLLGLVLAAALAAVMSTAS 324 Rubrobacter xyl...
EEL87156     244 QRIFTAKTVGIAKKGTIGAGVYCLLYAVAISIIGMCAAVVFPNLsdPQSAFITMAITILPvGLLGIVIASVVSALMSTAS 323 Bacillus cereus...
ADV06846     244 QRFFTGKTKRISKASGVLVGLYSALYSIVMVIVGMCAYVLFPNIqnTQNVFAHMAFEILPnGLLGIVFAALIAAIMSTAS 323 Staphylococcus ...
ACV56658     261 QRIFTAKNEKVSKTGTVCAGVYSVFYALATVVIGMSVFVLLPHLdnPQNAFVVGVSTFLPvGVRGLILAAAMAATMSVSS 340 Eggerthella len...
ADK14455     245 QRIFTARNGKIAKRGTILAGFYSMIYGAAAILLGMCVYIALPSLkdPQNAFVSGVSLFLPiGLKGFVIAAAMAATMSVAS 324 Clostridium lju...
EEZ61176     244 QRYLTARSVKVARRSGIASGAFILFYAIACTLVGMAAAVYMPGIddAQLVFAKMADEVLPtGALGLVLTAVLAVLMSTAS 323 Slackia exigua ...
Feature 1                                                                                        
NP_826461    323 GALIACATVANNDIWsrlrgvss---------rkgddhdeVRGNRLFILVMGVAVICTAIALNDVVEALTVAYNLLVGGL 393 Streptomyces av...
YP_643359    325 ACLMAASTVLANGVYahffag--------------retagVALNRLIMLLVGVAALVLAVIVGDVVGALSVAFALLVSAT 390 Rubrobacter xyl...
YP_001125932 343 GTLLASSTLLSHDILkqywlkd------------isdqkfVLLSRIMTLTIGIIAIAFAIWIQDVLVALDVAYAILSGAI 410 Geobacillus the...
AEF44724     323 ACLLASSTIALEDVLpaick---------------rpsggLAAGRLTTLIMGVIMLGLAFLVRDVMAALTLAYNLLVGGM 387 Serratia sp. AS9
ABG05816     325 AGLLASSTILANDVYagiiar--------------egrsdLGESRVFTLIVGVAVLAISLAVQDVVGALTIAYNLLTGAL 390 Rubrobacter xyl...
EEL87156     324 ATLLASSTLIVNDIIksttskn------------msekavIRTSRILTLIIGIFVMISAVWIQDVIVALDVAYAILSGSV 391 Bacillus cereus...
ADV06846     324 GTLLASATIISNDLLkpyvfkn------------medhqfLGLTRLTTCILAVIAIVISIWVKEVLVAIDIAYAILTGGI 391 Staphylococcus ...
ACV56658     341 GTILASSTILYNDLYlrfvrkgaa--------qgtahlkeVTITRLFALLIGVVVMVCSLWINDVLVGIDICYGYLSGCV 412 Eggerthella len...
ADK14455     325 GSILASSTILYNDVYtrfinkn------------pdekksIVINRLFACLIGIGVMIIAFLIQDVLTALDMAYAYLSGCV 392 Clostridium lju...
EEZ61176     324 GTLLASSSLLTNDVIkpalaylrtkskavakeyleedrmlLKASRRMTACVGAVAIVVAVWLNNVIAALDASYAILSGAL 403 Slackia exigua ...
Feature 1                                                                          
NP_826461    394 LVPILGGLLWKRgtvhGALASVIVGGLAVIGLMATFGilaNEPVYYGLLSSLAAYVIVSLATPATD 459 Streptomyces avermitilis MA-4680
YP_643359    391 FVPIVGALYWRRatgaGALAAIAAGSVVALAFIFTQGihsNAAIIFGLLASLVAFVGVSLLTPPPS 456 Rubrobacter xylanophilus DSM ...
YP_001125932 411 FVPLILGFFWKRvtakAGFYSIVLSSIVVLVGLAVEGlssTYPIMYGIGASIVSIIVLSYLFPSSN 476 Geobacillus thermodenitrifica...
AEF44724     388 LIPLVGAIFWQRatstGAIASMLAGSLCVLGLMYYHGieaNSPIYGGLLAGGVAFVVGSLLTRQSP 453 Serratia sp. AS9
ABG05816     391 FVPIIGALFWRRatgaGALVSMLVSSAVVVALMLWQGllaNSPIYVGMLTSLVVFVGVSLLTRPQT 456 Rubrobacter xylanophilus DSM ...
EEL87156     392 FFPIILGLFWKRvtdkAAFYSIILSAIVTIVGLIVQGlsaTDPILYGMVCSVLSIFIISYLTSPEF 457 Bacillus cereus AH1272
ADV06846     392 FMPVVLGLFMKRitpqAAFYAIIASVIVIFIGIAITGpqsTATIFYAILVNAIILIIMSQFQRKKE 457 Staphylococcus pseudintermedi...
ACV56658     413 FVPLVASFVLKRfspkAGLYALGASTVAVTGCFVVVGtasSVPIVAGMASGLVAYAAANLLSKQKV 478 Eggerthella lenta DSM 2243
ADK14455     393 FVPVLAAFVLKKfspkAGLVSLFLSTIVVSGTFFKYGvdsNYPIIFGIIVGLLAYIIVNSIDKNKV 458 Clostridium ljungdahlii ATCC ...
EEZ61176     404 FFPIILGMFWKKatakAALASIVVSSVVILLGLGLMGttaVEPIMIGLAVSGAIMVSVSLLGSRIK 469 Slackia exigua ATCC 700122

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