Conserved Protein Domain Family
FC-FACS_FadD_like

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cd05936: FC-FACS_FadD_like 
Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD
This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.
Statistics
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PSSM-Id: 341259
Aligned: 34 rows
Threshold Bit Score: 535.606
Created: 21-Oct-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
AAB89478      40 LYQLLEDTAKKYPDKTALif--fGKKITYRELDEMSDRIAGFLkslGIKKGDRVILDLPNVPQYVAAYYGILKVGATVVQ 117 Archaeoglobus f...
O07610         3 LVSKLEETASEKPDSIACrf--kDHMMTYQELNEYIQRFADGLqeaGMEKGDHLALLLGNSPDFIIAFFGALKAGIVVVP 80  Bacillus subtil...
NP_924896      3 LAYILDEGLENTPRKTLFtg--dGRSYTYNQVVRASENLATGLrrlGYAPGCRIAVMLPNLPEYGLAMYGLWWLGAQPVL 80  Gloeobacter vio...
YP_205639      4 LANNLERNATFRPNNIALif--qEQKITYQELNQKVNAIADHLhqlNIKPNEKIALSCPNTPEFVIAYYAIQKIGAVVVP 81  Vibrio fischeri...
NP_923381      3 LSRILDRQVQLHPDAPAFig--pEKSLTFGELARASAAVAGGLaqlGVVCGDRVAVMLPNVLPFPIAAYAIWRLGAQLVT 80  Gloeobacter vio...
NP_274296      8 FYEMLAAACRKNGNGTAVfd--gKEKTAYRALKQEAEAVAAYLqniGVKFGDTVALAVSNSTEFITAYFAISAIGAVAVP 85  Neisseria menin...
YP_035342      3 LVQSLAETAKKKGDKPAYif--mDQSVSYDQLNKMVTRFSSNLaemGIGKGDNVALVVGNSPHFLVGLYGTMKAGATVIP 80  Bacillus thurin...
YP_429376      2 LLWQLPQQHREFATHPALif--qDRRVTYGELVEWIGAYAGMFqamGVQPGERVTICAPNCPEFIYSYLGAIQAGAIVVP 79  Moorella thermo...
NP_924092      3 LAHLLDDQLRHRPEKVAFeg--dGRSLSYAQLAHLSENFAASLttaGYGPGDRIAVVLPNVPEYALAMFALWRRGAVPVL 80  Gloeobacter vio...
YP_003762699  11 VGGLLTRAAGTWPEHPAVletgtGRGLSYRQVDAAAHAQARRLaeaGVEPGDRVGLRLPTSVDFVVAFFGALRAGAIVVP 90  Amycolatopsis m...
Feature 1                                                                                        
AAB89478     118 CNPLYTEREIRYIQENSEAEYGFFvefvyprikgllaegklkkavickiedylpfplnilyplkkekvrieksdkVVYWK 197 Archaeoglobus f...
O07610        81 INPLYTPTEIGYMLTNGDVKAIVGvsqllplyesmheslpkvelv----------ilcqtgeaepeaadpevrmkMTTFA 150 Bacillus subtil...
NP_924896     81 INPQLTLRELRHILLDSQAQAVITtadllptlaplrclp---------------------pmltfivvggevpagDLSFA 139 Gloeobacter vio...
YP_205639     82 LNVMLKGEEVAYHLKDSDAVALISyqgsdampigqfgyegytka-----------dfcehfilietapvskkpaeAHSFN 150 Vibrio fischeri...
NP_923381     81 VNPLLKPQEVRHLLTDSGARVLVSlgqllppiaeliae------------------------lniqvvtvgggelGTPFE 136 Gloeobacter vio...
NP_274296     86 MNTFLKNSEYAYILNDCKARFLFAsaglskelaglkaqtpve----------------kiiwtdksrptgetaegDAFFE 149 Neisseria menin...
YP_035342     81 VNPIYTADEMHYILQNGDVKTIIVldvllpviqslttrl---------------------psleniiicetssdfNHTET 139 Bacillus thurin...
YP_429376     80 LNLMLTRDEIAYIVKDAGCSTLVIhraiverl-----------------------------------nlvpqmatALGLK 124 Moorella thermo...
NP_924092     81 INPQLTGRELDYILRDSQARAVIL---------------------------------------------------PEALL 109 Gloeobacter vio...
YP_003762699  91 LSPQVPGPELAKLLEHSGAKVVVQrd------------------------------------------------aDEDLP 122 Amycolatopsis m...
Feature 1                                                             #                          
AAB89478     198 DALKspltker----------------------------peinpkDDVAIFLYTGGTTGvPKAVMSTHFNLVANVYQTLE 249 Archaeoglobus f...
O07610       151 KILRptsaakq----------------------------nqepvpDDTAVILYTSGTTGkPKGAMLTHQNLYSNANDVAG 202 Bacillus subtil...
NP_924896    140 ELTAtagrsg-----------------------------iqrihpTDTAALLYTSGTTGePKAALLTHGNFWAIAQSSRI 190 Gloeobacter vio...
YP_205639    151 QWLEtgrktfe----------------------------tvyrsaEDSCVILYTSGTTGaAKGAELSQSNMLCNAQACQA 202 Vibrio fischeri...
NP_923381    137 HLFAapplle-----------------------------paavapEDVVAVLYTSGTTGrPKGAMLTSRNLGYDSEACAA 187 Gloeobacter vio...
NP_274296    150 DVRRfpekpdl----------------------------grqpriNDLAHIIYTSGTTGhPKGALISYANLFANLNGIER 201 Neisseria menin...
YP_035342    140 EKMKtftrmvgagd---------------------ltyegpeldeEDVAVILYTSGTTGkPKGAMLTHKNLYSNASDVAS 198 Bacillus thurin...
YP_429376    125 HLVVldettaaraka-------------------appatmvaakeEDICVFLYTSGTTGrPKGAMLSHRNFLADIKAMDA 185 Moorella thermo...
NP_924092    110 GVLAplrselpnlraivlgvpadedlnfaglaatpgqcpvaerhgDDIAQMMYTSGTTGtPKGALISHGNLLANARSGIE 189 Gloeobacter vio...
YP_003762699 123 DGVSgltpvgdpdgg--------------------gefadagrsgEDIAVVSYTSGTTGpPRGVMLSHRALLANLEQIGA 182 Amycolatopsis m...
Feature 1                      ##                                               # ##  #          
AAB89478     250 wvvdrtpDDVFIGVLPYFHSFGMtTSMNAPIANGSTIVLIPDPRDikRILESIQKYRASIFCGVPTMYAAIINHpdv--- 326 Archaeoglobus f...
O07610       203 ylg-mdeRDNVVCALPMFHVFCLtVCMNAPLMSGATVLIEPQFSPa-SVFKLVKQQQATIFAGVPTMYNYLFQHeng--- 277 Bacillus subtil...
NP_924896    191 aie-gtpKDHLLCVLPLFHSFGCmVALVLFALMGASVTFEHRLTPk-RLMEHLRDPRLSFLIAVPNLLSTLLRFpad--- 265 Gloeobacter vio...
YP_205639    203 ltn-qkgTDVSIAILPLFHTFGQsLIMNTSILAGSALVLISRFVPk-TVVQQIHEHKVTHLAGVPTMFIGLLAYaekhpg 280 Vibrio fischeri...
NP_923381    188 ale-igpSDRLFMVLPLFHAYGMtIGLLVCTRNGASVYLEPRFVPa-QALAHLKQFECTAFIGVPALFAALLTTeg---- 261 Gloeobacter vio...
NP_274296    202 ifk-iskRDRFIVFLPMFHSFTLtAMVLLPIYMACSIILVKSVFPfsNVLKQTLLKRATVFLGVPAIYTAMSKAkipw-- 278 Neisseria menin...
YP_035342    199 ylq-ytaDDRVVAALPMFHVFCLtVAVNAPIVNGATILMLPKFSPk-EVFRICRTYEPTIFAGVPTMYNYLYLFeea--- 273 Bacillus thurin...
YP_429376    186 vsn-lgpEDNFLCVLPMFHSFAWtTSVLLPLYLGSTITIKESFQPk-DTLKTLSEGDITVFCGVPSIYAVLWRLae---- 259 Moorella thermo...
NP_924092    190 rls-vtgDDHLFCILPVFHAFAFtAALVIMPLVGGSVSFEYRLSPk-KLMEHLSDPRVSVMVAVPSLLSTILRFpte--- 264 Gloeobacter vio...
YP_003762699 183 vegvlehDDRVLITIPLFHVYGLgPGLLQATAVGATAVLSERFEAq-RTLDDCAGHGVTSITGVPTMYGEFAALgade-- 259 Amycolatopsis m...
Feature 1                       ##                     ######                                    
AAB89478     327 --kkyDLSSVKACISGAAPLPVEVKRRFEEIt-GGKLVEGYGLSETSPVALGNPvyglnkeGSIGIPFPd-TYAVVIDDe 402 Archaeoglobus f...
O07610       278 --kkdDFSSIRLCISGGASMPVALLTAFEEKf-GVTILEGYGLSEASPVTCFNPfdrgrkpGSIGTSILh-VENKVVDPl 353 Bacillus subtil...
NP_924896    266 ---frLTENLRCVCCGGSALHPQVEADFRARf-GDIVRQGYGLTECVSSTTLNPlpgpvrpGSIGKPLPggPELAICDPq 341 Gloeobacter vio...
YP_205639    281 aylkeIAQTLKVAISGGASMPVEVLKQFEEKl-QVPVIEGYGLSESSPVAAFNHleferkpGSIGQPLPg-VTMKVVDKn 358 Vibrio fischeri...
NP_923381    262 ----tALTNLRFCISGGAPLPLPVLEAFEAKf-QTVILEGDGPTECSPVTAVNPlrgvrkaGSIGIPLPg-QQMTIRDPq 335 Gloeobacter vio...
NP_274296    279 --yfrWFNRIRLFISGGAPLAEQTILDFKAKfpRAKLLEGYGLSEASPVVAVNTper-qkaRSVGIPLPg-LEAKAVDEe 354 Neisseria menin...
YP_035342    274 --saeDVKTLRLCISGGASMPVALLQNFEKRf-DVIVSEGYGLSEASPVTCFNPldrprkpGSIGTNIWh-VENKIVNEl 349 Bacillus thurin...
YP_429376    260 ---egQFKSLKFAISGGAPLAAEIQRGFETKf-AFPLVEGYGLSEAAPVVCLNPldgvrkpGSIGIPLPg-MEVRLVDDd 334 Moorella thermo...
NP_924092    265 ---lkLSAALRCILCGGGPLPPQLEAAFAQRf-GDLVRQGYGMTECSPYAAFSPpdrpskpGSIGLPMPqgHKLAVRDPi 340 Gloeobacter vio...
YP_003762699 260 --lrrGLATVRRMTSGAAPLHPKVLTAIREAt-GLDVYEGYGLTECAPVVTSTLvtgypkpGSVGRPLPg-IELRLVDSd 335 Amycolatopsis m...
Feature 1                                                                #           #  #       #
AAB89478     403 g--------------kvLPIGEVGELVIKGPQVMKGYYKMEEETKKVLvnGWLLTGDMAKMDEdGYFYIVDRKKDMIIAG 468 Archaeoglobus f...
O07610       354 g--------------reLPAHQVGELIVKGPNVMKGYYKMPMETEHALkdGWLYTGDLARRDEdGYFYIVDRKKDMIIVG 419 Bacillus subtil...
NP_924896    342 tg-------------alLGERQVGELLIRGPHVFKGYHNRPEASAAVFldGWLRSGDLGYRDAdGYYFVVDRIKDVIIVS 408 Gloeobacter vio...
YP_205639    359 g--------------heVPTGQEGELVIRGHNVMKGYYKKPQETAKTIinGWLHTGDIVRFDDeGYIYVVDRLKELIISG 424 Vibrio fischeri...
NP_923381    336 sg-------------efLSDGEVGEILVRGPNTFKGYLNLPEETAQVFvdDWLRTGDLGYRDGdGYFYIVDRLKDLIIVA 402 Gloeobacter vio...
NP_274296    355 l--------------veVPRGEVGELIVRGGSVMRGYLNMPAATDETIvnGWLKTGDFVTIDEdGFIFIVDRKKDLIISK 420 Neisseria menin...
YP_035342    350 g--------------eeVPVGAVGELIVRGPNVMKGYYNAPEDTAATLkdGWLYTGDLAKMDEeGYFYIVDRKKDIVLVG 415 Bacillus thurin...
YP_429376    335 d--------------reVPRGEVGELVVRGPNVMAGYYNHPEETAAALrgGWLHTGDLARQDEdGYFYIVDRKKDLIILG 400 Moorella thermo...
NP_924092    341 sg-------------dfAAPGTVGELVVSGPHVFKGYWNQPEATSEAFveGWLRSGDLGYIDEeGYFFLVDRLKDMIIVG 407 Gloeobacter vio...
YP_003762699 336 gtdqavpldpddvddvfEADGETGLVSIRGANLFSGYWPDGGHGPDDE--GWFRTGDVGYLDTdGDLHLVDRANDLIIVN 413 Amycolatopsis m...
Feature 1        ###                                                              #              
AAB89478     469 GYNIYPREVEEVLYEHPAVVEAAVVGVPDPYRGETVKAYIVLKpeykgKVTEQEIIQFCKERLAaYKVPKLVEFRDELPK 548 Archaeoglobus f...
O07610       420 GYNVYPREVEEVLYSHPDVKEAVVIGVPDPQSGEAVKGYVVPKr---sGVTEEDIMQHCEKHLAkYKRPAAITFLDDIPK 496 Bacillus subtil...
NP_924896    409 GQNVYSQEVEKVLLSHRAVREAAVVGDPDPDKGEVVHAYVSLHeg--aTVGEAELVHYARSQLApIKVPRRLTVVEALPK 486 Gloeobacter vio...
YP_205639    425 GYNIYPREVEEVYMSHPSVHLVAVIGVEHPRFGEEVKAFVILKeg--hSISEKELIKWSRQHLAdYKCPKHLDIVEALPM 502 Vibrio fischeri...
NP_923381    403 GLNVYAREVEEVLQSHPRVRMAAVVGEFDELRGEVVHAFVEPIse-qePPEAQEIIRYCREKLAdYKCPRRVTVMAELPR 481 Gloeobacter vio...
NP_274296    421 GQNVYPREIEEEIYKLDAVEAAAVIGVKDRYADEEIVAFVQLKeg--mDLGENEIRRHLRTVLAnFKIPKQIHFKDGLPR 498 Neisseria menin...
YP_035342    416 GYNVYPREVEEVLYMHESVAEVVVIGVPDENLGEAVRAYVVLKq---tNVTEEELMHYCALHLAkYKVPKSIEFLTELPK 492 Bacillus thurin...
YP_429376    401 GFNVYPREVEEVLLAHPAVLEAAVVGVGDPVKGETVKAYVVLKeg--eSADRRQLQDFLKEHLAlYKIPRLFEFVPELPK 478 Moorella thermo...
NP_924092    408 GEKVYSREVEDVLLAFAPLREVAVVGQPDPDKGEIVRAFVSLQeg--aAIGEEEIIRFARERLApVKVPRSITVLAELPK 485 Gloeobacter vio...
YP_003762699 414 GFNVFPREVEEVIGQLPEVAEAAVVGVVDERSGEAVKAVVVPAtg--aALSEQQVADHCAAHLAgYKVPHLVEFAESLPH 491 Amycolatopsis m...
Feature 1                    
AAB89478     549 SAVGKILRRVLR 560 Archaeoglobus fulgidus DSM 4304
O07610       497 NATGKMLRRALR 508 Bacillus subtilis subsp. subtilis str. 168
NP_924896    487 SPTGRILKRRLR 498 Gloeobacter violaceus PCC 7421
YP_205639    503 TATGKILKRMLK 514 Vibrio fischeri ES114
NP_923381    482 STTGKILKRVLK 493 Gloeobacter violaceus PCC 7421
NP_274296    499 NATGKVLKRVLK 510 Neisseria meningitidis MC58
YP_035342    493 NTTGKLLRRALR 504 Bacillus thuringiensis
YP_429376    479 SPTGKVMKKLLK 490 Moorella thermoacetica
NP_924092    486 SATGKILKRELR 497 Gloeobacter violaceus
YP_003762699 492 SATGKLRRLRLR 503 Amycolatopsis mediterranei

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