Conserved Protein Domain Family
DUF6484
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pfam20093: DUF6484 
Domain of unknown function (DUF6484)
This domain of unknown function is found in uncharacterized proteins from Proteobacteria. This domain is approximately 80 amino acids in length and exhibits overlaps with pfam04717, which suggests that it has an OB fold and, thus, it belongs to the same clan. Many proteins containing this domain are related to the Type VI secretion system and to Phage-related baseplate proteins.
Links
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Statistics
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PSSM-Id: 466287
Aligned: 93 rows
Threshold Bit Score: 36.7725
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
PTL77044                  1 MGWVAAVDADGG-PLVDFE-GNPFdRPIPAQCGTLVDGTALedavqgRQGALLLFEEGNPSRPVLVTLL 67 
EXI64482                 42 TARLHGFDLDERpLIGSLLqLPGE--ILTAQSTVPLWRAMV------GSEVVVALESGDPFRPIILGVL 102
WP_051983928             47 LARLHGFDLLDQpLLSSLPgSPGQ--VVPARSTVALRRVMV------GSEVLVFFIDGDLQQPVISGVL 107 Polaromonas sp....
SFM81161                 48 TARLHGFGLQGEpLLAGLPgCAGE--LVPARSTVTLRRATA------GAQVLVLFENADPVRPIVIGVL 108
PRJNA523294:EYF70_10865  48 LVRFVGFDLDDQpLVAGIAgLPGH--VVRARSTVPLRRLEV------GAEVVAVLEGGLPERPLILGVI 108
SFU99418                 27 VVRFVGFSLEDDpVVCGVPgLPGQ--IVAARSAVPLRREQI------GMEVVVVFEGGAPARPIILGVL 87 
PRQ05889                 18 lATIVAIVDHQ--PRVRLH---DGeQLLVALSLVPIGPSEF------GRDVALEFIAGDPTRPLILGLV 75 
WP_037280589             15 RARLTGFGLNGQ-PQVTFA----DgATAEASTLVALTPADI------GRDAAIASIDGDGV--LVVGLL 70  Rubellimicrobiu...
RDK96757                 44 LGRIVSAGPGGLrVVV----PALKpDEMSAVSVCAITENET------GKTCAVQFIDGDGNKPLIMGLL 102
DSMZ:Fuma_03989          45 TATLAELSEDG--PVVTLQ----NgEQRLARTTVPLTPDSI------ARSVVLVFENGDANLPIIMGVI 101
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