3LIB,3LIF,4XMQ,5LT9,3LIA,3LI8,3LIC,5AVE,3C8C,5T65,5LTV


Conserved Protein Domain Family
PDC1_HK_sensor

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cd18773: PDC1_HK_sensor 
first PDC (PhoQ/DcuS/CitA) domain of methyl-accepting chemotaxis proteins, diguanylate-cyclase and similar domains
Histidine kinase (HK) receptors are part of two-component systems (TCS) in bacteria that play a critical role for sensing and adapting to environmental changes. Typically, HK receptors contain an extracellular sensing domain flanked by two transmembrane helices, an intracellular dimerization histidine phosphorylation domain (DHp), and a C-terminal kinase domain, with many variations on this theme. HK receptors in this family contain double PDC (PhoQ/DcuS/CitA) sensor domains. Signals detected by the sensor domain are transmitted through DHp to the kinase domain, resulting in the phosphorylation of a conserved histidine residue in DHp; phosphotransfer to a conserved aspartate in its cognate response regulator (RR) follows, which leads to the activation of genes for downstream cellular responses. The HK family includes not just histidine kinase receptors but also sensors for chemotaxis proteins and diguanylate cyclase receptors, implying a combinatorial molecular evolution.
Statistics
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PSSM-Id: 350341
Aligned: 726 rows
Threshold Bit Score: 32.919
Created: 31-Jan-2018
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3LIB_A        32 MKANLAIARTISTTmesye------tadrdEALLILENLlrd--------nphLLGTYVAFEpdafdgkdae-------- 89  Methanosarcina ...
WP_053334675 365 LKEVSQVIQKMAEGlkafsata-erlnqlaLSIQLLTQSfhldsprsvkhiaqTLADALGAEaghwealdstfvqalkqh 443 bacterium MP-01
CCY37594      61 LSPIASVINNIASRaeimaignrdtsdflrLSEDILRNTp------------qLKDIAIALEpyyy-------------- 114 Alistipes sp. C...
OAG27584     456 KEKASKLLVDLVEKlverpei---rsldpeKIVPLLREVlee--------hpyIQFIYVINQe----------------- 507 Thermodesulfata...
WP_051434253 438 KGAVQELVDSLARSkevls-------ldrkAMETTMRETvrr--------nnfLELLYITDAq----------------- 485 Desulfonatronum...
WP_080050855 334 HQQVCQRITELASEqvfc--------gppaQAEQRLRSFias--------dprFELLYLVGAd----------------- 380 Pseudomonas sp....
WP_073255537 424 VEFVKEKLIKLAGEsfvvn-------geekVWPENFEKIrre--------npaVLEIVLLDEe----------------- 471 Caldanaerovirga...
SHI50930     414 VEAVKGMLTDISKVegllh-------meetEGSQLFKEKqkn--------lsyVELIALVDEn----------------- 461 Lutispora therm...
WP_008422979 374 INNGIATLKQIAANpilkt-------meylQATPILLEQiek--------ypyFELIALMQRd----------------- 421 Clostridium sp. LS
KXG75115     415 VENARRALEEIAKKnkl-----------gqLTRQRLREIqer--------ypyLELLAVTGAd----------------- 458 Thermotalea met...
3LIB_A        90 --ytnspahdgtGRFVPYWnkmngtasvapllhy-----dssdyyqlpkatekDVLtEPYFYe---GVFMVSYVSPImk- 158 Methanosarcina ...
WP_053334675 444 rflenafltdpeGNLVAFTpnpelrlpdtaipvavgqnlserpwfqavmrdrrTTLtPVYTSll-tGQKCFTVAAPVydp 522 bacterium MP-01
CCY37594     115 ---------rnqKQFTAYSinengsirsmmitdply-tyqyydwyvipkctdsTYWtDPYIDrvweKLSLCSYTAPLhdg 184 Alistipes sp. C...
OAG27584     508 ------------GKRITPLvthledksryehllkde-dysdrdwfikpfktgkVYVtDFYTSkv-tSALCLTVSGPIrne 573 Thermodesulfata...
WP_051434253 486 ------------GIQLTANiprpslesssdrnafgk-dwsarpwfteamrtpiPYIsNVYTSqa-sGEPCITVSTPFrda 551 Desulfonatronum...
WP_080050855 381 ------------GIQVSENipaddlkastkgsmrgk-nwsdrpwfravkdnlqPHIsPVYRSsa-tDAYCFTLSAPVfdq 446 Pseudomonas sp....
WP_073255537 472 ------------GNVKFSTgelpiknlafr-------------pwfqkavkgqVYIsKPYIDia-sNRMTVTVSAPIigd 525 Caldanaerovirga...
SHI50930     462 ------------GRLLYSSpevpvdqrscsa-----------reffqravkgeTYVsKEYISil-tNHYNITVSIPIye- 516 Lutispora therm...
WP_008422979 422 ------------GLRKAITldyseeevyvnfa---------hrpyfkqaiegnEFIsEPYISvd-tNNYCIAMSVPIrde 479 Clostridium sp. LS
KXG75115     459 ------------GIVRTATvqlddnvkdvrh-----------refymdavrgkVYIsKPYISsi-tDDYCVTIALPIrne 514 Thermotalea met...
3LIB_A       159 eGEFAGIGGVDVSL 172 Methanosarcina mazei
WP_053334675 523 qGRLAGVLGLDVNA 536 bacterium MP-01
CCY37594     185 dGRFIGVICASIET 198 Alistipes sp. CAG:831
OAG27584     574 yEEVVGVLGMDIRF 587 Thermodesulfatator sp. S606
WP_051434253 552 eGRILGVIAADVRV 565 Desulfonatronum lacustre
WP_080050855 447 nGQLRHVLGADVRL 460 Pseudomonas sp. S-6-2
WP_073255537 526 gGRIMGVLAIDVDI 539 Caldanaerovirga acetigignens
SHI50930     517 gGNVKGVLLADINL 530 Lutispora thermophila DSM 19022
WP_008422979 480 nREILGILMADLKL 493 Clostridium sp. LS
KXG75115     515 nGSIEGTLIGDVTL 528 Thermotalea metallivorans
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