1MG4,5IP4,2DNF


Conserved Protein Domain Family
DCX

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cd01617: DCX 
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Dublecortin-like domain structurally similar to a beta-grasp ubiquitin-like fold
Dublecortin (DCX) is a microtubule-associated protein (MAP) with a stable ubiquitin-like tertiary fold. Ubiquitin (Ub) is a protein modifier in eukaryotes that is involved in various cellular processes, including transcriptional regulation, cell cycle control, and DNA repair. Microtubules are key components of the cytoskeleton that are involved in cell movement, shape determination, division and transport. The DCX gene family consists of eleven paralogs in human and mouse, and its DCX protein domains can occur in double tandem or as single DCX repeats. Proteins with DCX tandem domains in general have roles in microtubule (MT) regulation and signal transduction such as X-linked doublecortin (DCX), retinitis pigmentosa-1 (RP1) and doublecortin-like kinase (DCLK). Single DCX repeat proteins are normally localized to actin-rich subcellular structures, or the nucleus such as DCDC2. DCX is not only a unique MAP in terms of structure, it also interacts with multiple additional proteins. Mutations in human DCX genes are associated with abnormal neuronal migration, epilepsy, and mental retardation.
Statistics
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PSSM-Id: 340456
Aligned: 26 rows
Threshold Bit Score: 51.4616
Created: 12-Dec-2003
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1MG4_A         16 KKVRFYRNGDry-fKGIVYAIspdrfrSFEALLADLTRTLsdnv-----nlpqGVRTIYTIDglKKISSLd-QLVEGESY 88   human
5IP4_D         11 KLVTIIRSGVkp-rKAVRVLLnkktahSFEQVLTDITEAIkle--------tgVVKKLYTLDg-KQVTCLhdFFGDDDVF 80   human
Q8BWQ5         97 RVVTVVKLGGqp-lRKATLLLnrrsvqTFEQLLSDISEALgfpr-----wkndRVRKLFTLKg-REVKSVsdFFREGDAF 169  house mouse
Q8IWN7        152 RRILLIKNMDpr-lQQTVVLShrn-trNLAAFLGKASDLLr-----------fPVKQLYTTSg-KKVDSLq-ALLHSPSV 216  human
P56715        154 RSLVVFRNGDpk-tRRAVLLSrrv-tqSFEAFLQHLTEVMq-----------rPVVKLYATDg-RRVPSLq-AVILSSGA 218  human
Q7L273          2 RRVTLFLNGSp---KNGKVVAvy---gTLSDLLSVASSKLg-----------iKATSVYNGKg-GLIDDIa-LIRDDDVL 62   human
NP_065920     774 KRVWIYLNGGrp-eDGTYAWGk-----TISELLQDCSSRLkm---------thPARALYTPSg-EPIQSWd-DIERDMVI 836  human
XP_009019648   18 KRITLMRNGNtd-fKGTKIVVsekmypDFNLLIDEICKMKvsrlpdsnalgqlGTRYIYNKNg-EMVTSIs-QFQSGEQY 94   Helobdella ro...
ETW31926      151 KTIFLFNNEKky-dKGVYFLVksy-ikNIKSLCYEITKILqps--------igPTRKIYDQNf-SLVRNVn-DLINGGKY 218  Plasmodium fa...
Q550F6         21 ARVILFRNGDryhvEGVHCLVhsskfkTFDQLKLEFSKKVglf--------tgNVQKVYSMDk-KRIQDIk-DFVDGHHY 90   Dictyostelium...
1MG4_A         89 VCGS 92   human
5IP4_D         81 IACG 84   human
Q8BWQ5        170 IAMG 173  house mouse
Q8IWN7        217 LVCA 220  human
P56715        219 VVAA 222  human
Q7L273         63 FVCE 66   human
NP_065920     837 CVSM 840  human
XP_009019648   95 ICCA 98   Helobdella robusta
ETW31926      219 LCTS 222  Plasmodium falciparum FCH/4
Q550F6         91 ICCG 94   Dictyostelium discoideum
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