Conserved Protein Domain Family
7tmA_GPR88-like

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cd15211: 7tmA_GPR88-like 
G protein-coupled receptor 88, member of the class A family of seven-transmembrane G protein-coupled receptors
GPR88, an orphan G protein-coupled receptor, is predominantly and almost exclusively expressed within medium spiny neurons (MSNs) of the brain's striatum in both human and rodents; thus it is also called Striatum-specific GPCR (STRG). The striatum is known to involve in motor coordination, reward-based decision making, and response learning. GPR88 is shown to co-localize with both dopamine D1 and D2 receptors and displays the highest sequence similarity to receptors for biogenic amines such as dopamine and serotonin. GPR88 knockout mice showed abnormal behaviors observed in schizophrenia, such as disrupted sensorimotor gating, increased stereotypic behavior and locomotor activity in response to treatment with dopaminergic compounds such as apomorphine and amphetamine, respectively, suggesting a role for GPR88 in dopaminergic signaling. Furthermore, the transcriptional profiling studies showed that GPR88 expression is altered in a number of psychiatric disorders such as depression, drug addiction, bipolar and schizophrenia, providing further evidence that GPR88 plays an important role in CNS signaling pathways related to psychiatric disorder. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.
Statistics
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PSSM-Id: 320339
Aligned: 4 rows
Threshold Bit Score: 292.139
Created: 16-Dec-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of some class A family members with bound ligands (peptides or chemicals), agonists, or antagonists
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                               #  ##                    
Q9GZN0        33 PVSLLYSGLAIGGTLANGMVIYLVSSFRKlqttSNAFIVNGCAADLSVCALWMPQEAVLGllptgsaeppadwdgaggsY 112 chimpanzee
XP_004936972  26 FLSLLYAVLAISGTLSNVVVIYLVFSFKKlqttSNAFIVNGCAADLSVCALWMPQEAVLGllppnss------slrsaeY 99  chicken
XP_002934189  21 LVTTVYSLFSVSGTLANVLVIYLVCSFKKlkttSNAFIVNGCVSDLLVCAFWMPQEVILLstgrv----------enhaY 90  western clawed ...
XP_001342529  21 SLATVYSFMCVLGTILNLLVIYLVVTFKKlrtaSNAFIVNGCVADLLVCAFWMPHEAVATstgtl----------lvlgY 90  zebrafish
Feature 1        ###### ##  #                                             # #####                
Q9GZN0       113 RLLRGGLLGLGLTVSLLSHCLVALNRYLLITrapatyqalyqrRHTAGMLALSWALALGLVLLLPPWaprpg-------- 184 chimpanzee
XP_004936972 100 RLLREGLLGLGLTVSMASHLLVAFNRYVLITklpsvyqalyqrRHTGCMIGLSWALALLLLPLLPGLwttgpapq----- 174 chicken
XP_002934189  91 RVFMEGVFFLWMTVSLLSHALIALNRFVMITklptvyhtvyqkRNTEWMIAMAWVLPLAFLLPWLFGqrpreislscpql 170 western clawed ...
XP_001342529  91 QAFKEALLFLGITVSLLSHSLIAVNRYVLITktpavyqslyqkRNTEWMIAGSWLLSLGALFPWLTSfryptkschds-- 168 zebrafish
Feature 1                    #  ### ### ##                                                       
Q9GZN0       185 --------aappRVHYPALLAAAALLAQTALLLHCYLGIVRRvrvsvkrvsvlnfhllhqlpgcaaaaaafpgaqhapgp 256 chimpanzee
XP_004936972 175 ----ppprqtdgGSRYPALFLALAVLGQTALLLHCYLGIVRRvrgsakrvsvlnfhl----------------------- 227 chicken
XP_002934189 171 rlyvflgqevsvSSTYTAILSAVTVLSQTAIVLHCYFRIFRKvqislkrvsvln-------------------------- 224 western clawed ...
XP_001342529 169 -adgsfavvsvlSSRFAAGTLAFTIIGQTLVVVYCYFKIFRRvqisvkrvsiln-------------------------- 221 zebrafish
Feature 1                                                #  ## ##  #      ## ###  #  ##          
Q9GZN0       257 ggaahpaqaqplppalhprrAQRRLSGLSVLLLCCVFLLATQPLVWVSLASgfslpvPWGVQAASWLLCCALSALNPLLY 336 chimpanzee
XP_004936972 228 -----lhqlpfpaapppprrAQRRLSSVSVLLLCCVFLLGTQPLVWVSLLGfflrpaPPALQAASWLLLCSLSALNPLLY 302 chicken
XP_002934189 225 --------fqvvhnlpcscpRKDKRLGLYVLIVCCVFALTTEPFAWTVLYGlfq-plPRTLITGSWLLFCLLFVLNPFIY 295 western clawed ...
XP_001342529 222 --------fqivnnlpysypRKDKRLGFYVLAVCFIFILTTEPIFWVLVAGlfv-pvSVAIWTSTWIVFCTIFVSNPFLY 292 zebrafish
Feature 1                   
Q9GZN0       337 TWRNeEFRRSV 347 chimpanzee
XP_004936972 303 TWRSeEFRRAA 313 chicken
XP_002934189 296 TWKNeEFRRSF 306 western clawed frog
XP_001342529 293 TWKNeEFRKSF 303 zebrafish

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