Conserved Protein Domain Family
Rho3

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cd04134: Rho3 
Ras homology family 3 (Rho3) of small guanosine triphosphatases (GTPases)
Rho3 is a member of the Rho family found only in fungi. Rho3 is believed to regulate cell polarity by interacting with the diaphanous/formin family protein For3 to control both the actin cytoskeleton and microtubules. Rho3 is also believed to have a direct role in exocytosis that is independent of its role in regulating actin polarity. The function in exocytosis may be two-pronged: first, in the transport of post-Golgi vesicles from the mother cell to the bud, mediated by myosin (Myo2); second, in the docking and fusion of vesicles to the plasma membrane, mediated by an exocyst (Exo70) protein. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Rho proteins.
Statistics
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PSSM-Id: 206706
Aligned: 4 rows
Threshold Bit Score: 327.587
Created: 30-Dec-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Comment:Rho molecules assume an active conformation when bound to GTP and inactive when GTP is hydrolyzed to GDP
  • Comment:Mg2+ ion plays a key role in bringing together the functional regions of the phosphate-binding, switches I and II
  • Citation:PMID 9545299

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              ######                                       ## #                      
CAD86888   14 RKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFvd-gnSIELSLWDTAGQEEYDQLRSLSYsDTHVIMICF 92  fission yeast
Q9P8J9     18 RKVVVCGDGACGKTSLLNVFTRGFFTQVYEPTVFENYVHDLYid-dqLVELSLWDTAGQEEFDRLRSLSYaETHVIMICF 96  Schizophyllum commune
XP_760217  19 RKVLVLGDGASGKTSLLFVLVRHEFPQTYEPTVFENYTHIQHthtglAVELTLWDTAGQEEFDKLRSLSYaDTDVVLLCF 98  Ustilago maydis 521
CAA86874   17 RKIVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFvd-skHITLSLWDTAGQEEFDRLRSLSYsDTQCIMLCF 95  baker's yeast
Feature 1                                      # #                                            
CAD86888   93 AVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGadeeqvd-------------------------hskiidyEE 147 fission yeast
Q9P8J9     97 SVDNPTSLENVESKWLDEILEYCPGVKLVLVDSKCDLRDdpavldrlq---------------------rygthtdqyEE 155 Schizophyllum commune
XP_760217  99 SVDNPVSLQNVESRWIAEIRHHCPAVKIMLVALKCDLREprnpr------------------------------tlsyNH 148 Ustilago maydis 521
CAA86874   96 SIDSRDSLENVQNKWVGEITDHCEGVKLVLVALKCDLRNnenesnaitpnniqqdnsvsndngnninstsngknlisyEE 175 baker's yeast
Feature 1                      ##                                       
CAD86888  148 GLAAAKKINAvRYLECSAKLNrGVNEAFTEAARValaaqprgtkdgadeshgTGCIIA 205 fission yeast
Q9P8J9    156 GLGVARRIRAsRYLECSSKHNrGVNEVFLRGRARvtvhsi-------rqgsaGSCCVM 206 Schizophyllum commune
XP_760217 149 GLDVAKRINAcRYLECSAKSNrGVTECFTELASVaanvr--------phphsRACTIA 198 Ustilago maydis 521
CAA86874  176 GLAMAKKIGAlRYLECSAKLNkGVNEAFTEAARValtagp------vatevkSDSGSS 227 baker's yeast

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