1YEY


Conserved Protein Domain Family
rTSbeta_L-fuconate_dehydratase

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cd03324: rTSbeta_L-fuconate_dehydratase 
Click on image for an interactive view with Cn3D
Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA. rTS beta expression is associated with the production of small molecules that appear to mediate the down-regulation of thymidylate synthase protein by a novel intercellular signaling mechanism. A member of this family, from Xanthomonas, has been characterized to be a L-fuconate dehydratase. rTS beta belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Statistics
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PSSM-Id: 239440
Aligned: 14 rows
Threshold Bit Score: 750.326
Created: 21-Sep-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
metal bindingputative active
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1:metal binding site [ion binding site]
Evidence:
  • Structure:1YEY; Xanthomonas L-fuconate dehydratase with bound Mg

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                             
1YEY_D              5 RTIIALETHDVRFPTSRELDGSDAXNPDPDYSAAYVVLRTDgaedLAGYGLVFTIGRGNDVQTAAVAALAEHVVglsvdk 84   Xanthomon...
CAD61030            2 SIITAVDTFDIRFPTSLELDGSDAMNPDPDYSAAYLIIRTDagdgHEGHGFVFTIGRGNEVETAALDALRGHILgrdvet 81   Arthrobac...
C97696              2 TKITDLRVFDLRFPTSQSLDGSDAMNPDPDYSAAYVILDTDep-rLKGHGLTFTIGRGNDICCMAIEAMRHLVVgtdlat 80   Agrobacte...
REF_beijgi:YP1455   2 TIITALRTEDVRFPTSLELDGSDAMNPDPDYSAAYVILDTDnp-aLSGHGLTFTIGRGNEICCVAIHALEHLIVgrdlas 80   Yersinia ...
XP_327350          48 ITITGWTTRDVRFPTSLDKTGSDAMNAAGDYSAAYCILQTDs--kYTGHGMTFTIGRGNDIVCSAINHVADRIRgrtlss 125  Neurospor...
AAW41801            4 LKITEFSVHDIRFPTNVTGDGTDAMNKECDYSAAYIVVKTNs--dLKGQGMTFTIGRGNEIVCFAIEQIANRIVgldlap 81   Cryptococ...
XP_684130           4 IKIINVSVRDVRFPTSLEQHGSDAMHTDPDYSVAYVVLETDka-eLKGYGLTFTVGRGTEIVVCAVKALSTLVVgktlee 82   zebrafish
ZP_00460865         2 PIIRSMRVLDVRFPTSRQLDGSDAMNPDPDYSAAYVVLETDrd-gLEGHGLTFTIGRGNEICCAAIDAMRHLVVgldldw 80   Burkholde...
XP_394781           3 ILITDIDVKDIRFPTSLLADGSDAMHTDPDYSCAYVTIKTNk--gIEGYGLTFTLGRGTEIVVQACKSMSYLVKgenann 80   honey bee
ZP_00601806         4 LRITGVEALDVRFPTSRDLSGSDAMNPAPDYSAAYAILRTGe--gLDGHGLTFTIGRGNELCVAAIRSLSPLVVgqtles 81   Rubrobact...
Feature 1                                                                                             
1YEY_D             85 viadLGAFARRLTNDSQLRWLGPEKGVXHXAIGAVINAAWDLAARAANKPLWRFIAElTPEQLVDTIDFRYLSDALTRDE 164  Xanthomon...
CAD61030           82 llddMGATWKLLAHDSQLRWLGPEKGVMHMAIGAVVNALWDLKAKRAGLPLWELLAGmTPEELVALVDFRYLTDALTPDE 161  Arthrobac...
C97696             81 vtenPGKYWRHLTSDSQLRWIGPDKGAMHLATGAVVNAVWDLLAKKAGKPVWQLVADmSPEEIADIVDYRYLTDVLTRDD 160  Agrobacte...
REF_beijgi:YP1455  81 mtanMGKFWREFTSDSQLRWIGPEKGAIHLATGAVINAVWDLWSKAEGKPLWRLVADmSPEELVRCIDFRYITDCITPEE 160  Yersinia ...
XP_327350         126 lvanWGQTWRHLVNDSQLRWIGPEKGVIHLALGAVVNALWDLWAKVLGKPVWRIVSEmAPEEFVRCIDFRYITDAITPQE 205  Neurospor...
AAW41801           82 ifadMGKFWDFLVADPQHRWLGPEKGVIHIATAAISNAIWDMYAKHAGKPLWKLIVDfTPEEFVKATSFRYITDALSPAE 161  Cryptococ...
XP_684130          83 itsdFRGFYRLLSSDGQMRWIGPEKGVIHLATAAVLNAVWDLWARVERKPLWKLLVDmDPAKLISCIDFRYLTDALTEQE 162  zebrafish
ZP_00460865        81 iredMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNAVWDLWAKAVGKPLWRLVADlSPEELARAIDFRYLTDCLSPDE 160  Burkholde...
XP_394781          81 iftnFGIFWRKLTSESQLRWIGPEKGVIHLATAAIINALWDLWARIEKKPVWKLLTDlTPEQLISTIDFRYITDVITKEE 160  honey bee
ZP_00601806        82 iardMAAFWYRLTGDSQLRWVGPEKGVIHLAAAAIVNAVWDLWAKAEAKPLWKLLVDmTPEEIVACVPFRYITDALTPEE 161  Rubrobact...
Feature 1                                                                                             
1YEY_D            165 ALAILRDAqpqrAARTATLIEQ-GYPAYTTSPGWLGYSDEKLVRLAKEAVadGFRTIKLKVGAnvQDDIRRCRLARAAIg 243  Xanthomon...
CAD61030          162 ALTILRTAqpgrETRAAALRAE-GYPAYTTTPGWLGYSDEKLTRLAKEAVadGFAQIKLKVGAslEDDIRRVRTARAAVg 240  Arthrobac...
C97696            161 ALAILRRAeagkKERIETLKNE-GYACYTTSAGWLGYDDAKLRRLCQEAIdaGFNHVKMKVGRdlEDDIRRLTITREVIg 239  Agrobacte...
REF_beijgi:YP1455 161 ALTLLQQRahnkALRLEKLQDE-GYPCYTTSAGWLGYPDDKLRRLCQDAVdaGFDYLKLKVGRdlEDDIRRVRITREVLg 239  Yersinia ...
XP_327350         206 AVEMLKETektkTERIKDAEANrAVPAYTTSAGWLGYGEDKMRGLLRETMekGYKHFKLKVGGsvEQDKRRLGIAREVIg 285  Neurospor...
AAW41801          162 ALEILKSKesgkAAREADVKKR-GYPAYTTSVGWLGYSDEKVRRLTKESLaqGFNHFKLKVGAdpEDDLRRGRLIRSIId 240  Cryptococ...
XP_684130         163 ALDILVKGkkdqKSREEQMLKE-GYPAYTTSCAWLGYTDQQLTQLCNEALaqGWTKFKVKVGAdlQDDIRRCSLIRKLIg 241  zebrafish
ZP_00460865       161 ALDLLRRQapgkAARIAALERD-GYPCYTTSAGWLGYSDDKLRRLCREAVdeGFEYVKLKVGAnlEDDIRRVTIAREVIg 239  Burkholde...
XP_394781         161 AIKLLKDNqkgkEEREMILRKN-GYPAYTTQVGWLGYSDNKVKELCAKYLalGFTSFKAKVGQnlADDIRRCQLIREVIg 239  honey bee
ZP_00601806       162 ALEILRRNegtrAAREAEMLGS-GYPAYTTSAGWLGYTDERVRELCQEAVaqGFAHFKQKVGAsiEDDVRRAALIREEIg 240  Rubrobact...
Feature 1                                            #                         #                      
1YEY_D            244 ------------------------pDIAXAVDANQRWDVGPAIDWXRQLAefdIAWIEEPTSPDDVLGHAAIRQGIt--p 297  Xanthomon...
CAD61030          241 ------------------------pDIKIAVDANQRWDVQQAIDWMAHLApyhIAWIEEPTSPDDILGHAAIARGVa--p 294  Arthrobac...
C97696            240 ------------------------pDRYLMIDANQVWEVDQAIEWVNKLAfskPFFIEEPTSPDDIAGHRKIRAAIg--s 293  Agrobacte...
REF_beijgi:YP1455 240 ------------------------pDRKLMIDANQIWETNEAIPWVNQLAfanPWFIEEPTNPDDIEGHRRIRQGVa--p 293  Yersinia ...
XP_327350         286 y----------------------dkGNVLMVDANQVWSVPEAIEYMKELKefkPWFIEEPTSPDDILGHKAIREALkeyg 343  Neurospor...
AAW41801          241 dpanmpkdrkpidpasianknagptGCVLMVDANQVWDVPQAVEYMKKLEplkPWFIEEPTAPDDAVGHAAIRKALkpin 320  Cryptococ...
XP_684130         242 ------------------------pNNTLMIDANQRWDVNEAITWVTKLAefqPLWIEEPTCPDDILGHASISKALaplg 297  zebrafish
ZP_00460865       240 ------------------------pDRKLMIDANQVWEVDEAIDWVRELAfarPWFIEEPTSPDDVEGHRKIREAIa--p 293  Burkholde...
XP_394781         240 ------------------------yENKLMVDANQIWDINEAIEWMKQLIkfkPTWIEEPTSPDDVLGHAKIANELrphg 295  honey bee
ZP_00601806       241 ------------------------pERNLMMDANQVWDVEEAIDNIRRLAefdPYWVEEPTSPDDVLGHARIAEAVa--p 294  Rubrobact...
Feature 1                   #                                                                         
1YEY_D            298 VPVSTGEHTqNRVVFKQLLqagAVDLIQIDAARVggVNENLAILLLAAKFGVRVFPHAGGVGLCELVQHLAXADFVAITG 377  Xanthomon...
CAD61030          295 IPVATGEHVqNRVVFKQMLqagSLQVLQIDAARVagVNENIAILLLAAKFGVRVCPHAGGVGLCEAVQHLSMFDYIAVSG 374  Arthrobac...
C97696            294 VKVATGEMCqNRIMFKQFIaegAIDVVQIDSCRMggLNEVLAVLLIAAKYNLPVWPHAGGVGLCEYVQHLSMIDYLVVSG 373  Agrobacte...
REF_beijgi:YP1455 294 VKVATGEMCqNRIMFKQFImreAIDVVQIDACRLggVNEVLAVMLMAAKYDLPVCPHAGGVGLCEYVQHLAMIDYLCIAG 373  Yersinia ...
XP_327350         344 IGVATGEMCqNRVVFKQLLmsgAIDVCQIDACRMggVNEVLAVLLIAKKYGVPIVPHSGGVGLPEYTQHLSTIDYVVVSG 423  Neurospor...
AAW41801          321 IGVATGEHAhNRMVFKQLLqldAIDVCQIDSCRLggVNEILSVLLMSAKFGVPVCPHAGGVGLCEYVIHLSLIDYICVSG 400  Cryptococ...
XP_684130         298 IGVASGEQChNRVMFKQFLqasALQFVQIDSCRVgsVNENLATILMAAKFNVPVCPHAGGVGLCELVQHLILFDYISVSA 377  zebrafish
ZP_00460865       294 VQVATGEMCqNRVLFKQFIargAIDVVQIDACRLggVNEILAVMLMAAKYGLPVCPHAGGVGLCEYVQHLSMIDYVCISG 373  Burkholde...
XP_394781         296 IGVATGEMCaNRVMFKQLLqarAIDYCQIDSARIggINEILSVYLMAKKLNVPVCPHAGGVGLCEMVQHLQMWDFICLNG 375  honey bee
ZP_00601806       295 VRVATGEHCqNRIIFKQLMqarATGFCQIDACRLggVNEVLAVLLMAAKFGVPVCPHAGGVGLCEYVQHLSIFDYVYVSA 374  Rubrobact...
Feature 1                                                         
1YEY_D            378 KxedRAIEFVDHLHQHFLDPVRIQh-GRYLAPEV--PGFSAEXH 418  Xanthomonas campestris pv. campestris
CAD61030          375 TkegRTIEFVDHLHEHFITPVVVHd-GAYWPPAA--PGAGNEML 415  Arthrobacter ilicis
C97696            374 TkegRVIEYVDHLHEHFIEPCDIRn-AAYMPPKL--PGFSIEMK 414  Agrobacterium tumefaciens
REF_beijgi:YP1455 374 TdkgRVIEYVDHLHEHFVHPCVIKn-AAYMPPEQ--PGFSIEMH 414  Yersinia pestis biovar Medievalis str. 91001
XP_327350         424 Kk--SVLEYVDHLHEHFLYPSVIKd-GYYQTPTE--PGYSVEMK 462  Neurospora crassa
AAW41801          401 DmerNVLEFVDHLHEHFLYPVSINseGRYNVPTDakGGYSIEMF 444  Cryptococcus neoformans var. neoformans JEC21
XP_684130         378 SlsnRMCEFVDHLHEHFKSPTVIRn-AKYIPPKD--PGFSCEML 418  zebrafish
ZP_00460865       374 TkegRVTEYVDHLHEHFVEPCVVRg-AAYMPPTA--PGFSIEMK 414  Burkholderia cenocepacia HI2424
XP_394781         376 StenRVIEYVDQQHEHFEYPVCIQn-ACYMPPTS--PGYSTKFT 416  honey bee
ZP_00601806       375 SledRVLEYVDHLHEHFVDPVRMEn-GRYLPPQA--PGYSIEMR 415  Rubrobacter xylanophilus DSM 9941

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