1RU4


Conserved Protein Domain Family
Beta_helix

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pfam13229: Beta_helix 
Right handed beta helix region
This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
Statistics
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PSSM-Id: 463811
Aligned: 95 rows
Threshold Bit Score: 36.6159
Created: 25-Mar-2022
Updated: 13-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1RU4_A        108 YGF-YVTGDYW--YFKGVEVTRa----GYQGAYVIGSHN----TFEn-TAFHH-NRNTGLEINNGg----SYNTVINSDA 170  Dickeya chrys...
XP_001581636  493 SGI-QLLCCSGevKIEKCNIKKn----HECGILLQESTNv---NISn-TDISG-NFFSGIESSK------SNIKFEIGKI 556 
XP_001323754  471 SGL-EINGVQTgfSIDQCNFTRc----RQCGIVIIDSSV----ELSlcNAMSN--RYSGFEVRS------SKVSLKRCRA 533 
CAP30462      377 LGI-FINTDQQi-NIRRSTAYSn----NGTGIYVGTSEV----TLE--NVVVNaNGFYGIHVEVEkrleeNKFQMDGVNV 444 
EAY04713      309 AGI-AIDNVFGf-TGSNLKVHDv----QASGIIAIGKNKv---NLFn-SEIEK-TKYNGFEMKG------GEMQLKNVKF 371 
EFA77968      671 GGV-WATQTSL--TFTDSTIQSirsgpNKTDTYLAQQCNl---VFSn-CNFID---HGDIYLAS------SNIELTETTL 734 
EAY20278      182 RGL-NLRSATTa-FVSRSTFLGm----TTHGVSATQKSQy---VIEe-SSFSS-CRAAAIESKTDg----KLLQVDACRI 246 
EAY19564       83 GGI-CTNTASYi-TIKNSRIHE-----IQSGVDYLLASTnsriEIEn-TIFEN-SMLYGISADDS-----SNITLRNCKI 148 
EAY10241      175 CGI-LCTDSAQl-KVINSTIENc----KDSGIVALGESYi---CIQk-TQFTN-NGGNAVELNTIs----SENYLKGCAI 239 
XP_001317971   80 QGLvHCTGEGTl-IARNCTFTPsd-qqPNTAVEVFAQSKc---IFEn-CVFSN-AIVCPLTIRDR-----ASFEIINCTF 147  Trichomonas v...
1RU4_A        171 YRNYdpkkngsmadgfgpkqK-QGPGNRFVGCRAWENSDDGFDLf-Ds--PQKVVIENSWAFRNGinywndsafagnGNG 246  Dickeya chrys...
XP_001581636  557 SGNAmgg----------cclR-HGSTMNMKKIEFLKNGVSSLSLe-S---KSSSIAEETIFKQTN------------GYA 609 
XP_001323754  534 DKNAsgg----------icaR-GGSAMTVDTCSVMENGQVGASLe-N---KSNITFKSTTIENNK------------HLG 586 
CAP30462      445 SAHRtefsv-------elftT-ADAKIGIANSRFHDNKKGGVRIs-GqfqSPNIIFRDCRFLRNS------------GEI 503 
EAY04713      372 AQIGnia----------lnfA-GAPTGVFDGCIFTHNCN-DLQLa-----GGNLQFINSTFEYAT------------KAS 422 
EFA77968      735 SNSRtfi-----------qlL-PSSSAFVTNCTFYDNED-SIFLqqS---NSYLIVLNSQFYNNRa-----------SQG 787 
EAY20278      247 ENCDsg------------ilV-FNGSVTVSNSKIGSMSNYSLLVq-G---SAQVTTNGNEFNDNS------------GEG 297 
EAY19564      149 INCSeag----------lvaT-GYSKVFVYDSLIDKSDTDLTFAd-T---RSQFVFSNTEFKNAQ------------QTA 201 
EAY10241      240 SQHPqgc-----------giAcSGPGKLLAVDCILSGFLAGISLt-D---GFEATTVNCHLTNAT------------QSA 292 
XP_001317971  148 HLNTqts----------lliL-ESAKGFVNKSTFLGTDKFSVYVf-S---NSQCEFNECKFSEIA------------GKG 200  Trichomonas v...
1RU4_A        247 FKLGGNQavGNHriTRSVAFGNV---------SKGFdQNNNAGg-VTVINNTS 289  Dickeya chrysanthemi
XP_001581636  610 CSIVRHS---LLtlNGCHVENHK---------DVAVqIEGRNSk-LVFDNTTL 649 
XP_001323754  587 IAVELES---FVtlKSCLVTKHS---------CVAMqVEGKDSr-AFVDRTKF 626 
CAP30462      504 IQFNDFKn-ASLimDKCEFVSSNyidfdggdsAVSLkNVTGNGnqLTISNCKF 555 
EAY04713      423 TLLQKTA---KTtfENCNFNAVC---------EALVaIYDQNTe-SSFTNCDF 462 
EFA77968      788 SVLYQLTq-AKAtfNNNNFTGNSas------kNGGCiYVGQYS--TTTLTDTI 831 
EAY20278      298 AVIACEG--GRLiaNKDKFTGIM---------KCGIaAFSKSS--IKVSDATF 337 
EAY19564      202 IFINANS---TLkvTNSKFTDNH----------KGAlAVHQSFe-TELENCDI 240 
EAY10241      293 LVSATNK--SSInmFNDHLTGNC---------QAGLlATDGAS--ISATNVQI 332 
XP_001317971  201 AYVFKNS---EAtfNKCRFEKIK---------GGAInCSTDGT--TIVDNCTF 239  Trichomonas vaginalis G3
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