1SG5


Conserved Protein Domain Family
ROF

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pfam07073: ROF 
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Modulator of Rho-dependent transcription termination (ROF)
This family consists of several bacterial modulator of Rho-dependent transcription termination (ROF) proteins. ROF binds transcription termination factor Rho and inhibits Rho-dependent termination in vivo.
Statistics
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PSSM-Id: 429276
Aligned: 30 rows
Threshold Bit Score: 69.1552
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1SG5_A             9 PINCDDYDNLELACQHHLMLTLELKDGEKLQAKASDLVSRK----NVEYLVVEAA-GETRELRLDKITSFS----HPEIG 79  Escherichia...
Q12MD8            22 HIRCADYDYIEIMCLHRYRVTVMMKDLTQYEGQFHTTSIIEfegiKREAIVGFDInQAPIQLMFEDILSISvhddKAQFS 101 Shewanella ...
Q081B6             3 PIKCEIYDYIEIICLYRYRVKLTLTDGTHIQGQFDRILYVNrnqqKHEAIAGINQqQQAIEVILTYITSIDvlsqNASFS 82  Shewanella ...
jgi:Nit79A3_0907   5 tISCELHDFVEVACMYGYRLKLILKNNQIIEGKAIDVVNSPe---KGECLVIDS--DSRQHIELIQLVRMEvltpNAKFS 79 
jgi:Fbal_3574      1 -MRCQDYDYIEIACLYHYPVRLTLRDGRVVEGIAGDSTWNAq---RQEVLSLTTD-QGLETVLLADLVSLTvtvdNPHFQ 75 
WP_012485931       1 MIHCDQHDYIEIVCLYHYPIRLTLTSGATIEGIAQDTQHNDq---REECIKLSTD-TGEQLVVLSELKQLDvlveNPHVE 76  Cellvibrio ...
CAV18741           7 MISCNDYDYIEIVCMHRYPIKLTLKSGEQIECVGLDTQRNDs---REECIKVSIQ-GVEQLVVLTDLSTLEvcvdNPHFQ 82 
WP_014290713       1 MMSCEQHDYIEIACLYRYPVRLTLTNGEHIAGVALDTARNDd---QEECLKLRIG-DEVRLLPLASLACMIaarpNPHFV 76  Oceanimonas...
Q87JZ9             1 MVTCSQYDFIEIACMFKLPIEITLKNGETHQGNAFDTGYDMq---RQECLFLDMD-GEHTAFPTEQLVAMRalkaNPHFD 76  Vibrio para...
WP_013868119       1 MVTCSQYDYIELACLFHLPVKLTLKNGITYSGTAMDTLRNEh---QQECIVLKNE-QSEHLIETNALLMMEalssHPHFT 76  Vibrio
1SG5_A            80 TVVV 83  Escherichia coli
Q12MD8           102 RLQF 105 Shewanella denitrificans OS217
Q081B6            83 HISL 86  Shewanella frigidimarina NCIMB 400
jgi:Nit79A3_0907  80 EVIF 83 
jgi:Fbal_3574     76 QVQF 79 
WP_012485931      77 RVVF 80  Cellvibrio japonicus
CAV18741          83 QISF 86 
WP_014290713      77 QVDF 80  Oceanimonas sp. GK1
Q87JZ9            77 EVTF 80  Vibrio parahaemolyticus
WP_013868119      77 LIKF 80  Vibrio
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