Conserved Protein Domain Family
PRK11642

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PRK11642: PRK11642 
ribonuclease R
Statistics
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PSSM-Id: 236944
Aligned: 97 rows
Threshold Bit Score: 1543.16
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
123440767   1 MSQDPFLEREAEKYESPIPSREFILAHLAKRETPASREELANELNLSGEEQLEALRRRLRAMERDGQLVFTRRQCYALPE 80 
197287184   1 MSKDPFQDREAEKYASPIASREFILEEMKKRPAPMSREDIAQALKISGEENLEALRRRLRAMERDGQLVFTRRQCYALPE 80 
300721496   1 MSKDPFREREAEKYESPIPSREYILDIISKHTIPVSRQELAQELQLTSADAQEALRRRLRAMERDGQLVFTRRQCYALPE 80 
290473407   1 MSKDPFQEREAEKYESPIPSREYILDILSKHTTPVSRQELAKELQLTSADAQEAFRRRLRAMERDGQLIFTRRQCYALPE 80 
253991547  17 MSQDPFLEREAEKYEAPIPSREYILDIISKRTVPVSRQELAQELNLTNNEELEALRRRLRAMERDGQLVYTRRQCYALPE 96 
50122543    1 MSQDPFLEREAEKYESPIPSREYILAHIAKRDTPISREELATDLQLTGEEALEALRRRLRAMERDGQLIFTRRQCYALPE 80 
261822839   1 MSQDPFLEREAEKYESPIPSREYILAHIAKRDTPIGREELAADLQLTGEEALEALRRRLRAMERDGQLIFTRRQCYALPE 80 
242238240   1 MSQDPFLEREAEKYESPIPSREFILEHLRKRDTPISRDELATDLALSSDEQLEALRRRLRAMERDGQLVFTRRQCYALPE 80 
271501897   1 MSQDPFLEREAEKYEFPIPSREYILEHLAKRDTPISREELASDLQLTSDEQLEGLRRRLRAMERDGQLVFTRRQCYALPE 80 
251788404   1 MSQDPFLEREAEKYEFPIPSREYILEHLAKRDTPISREELASDLQLTSDEQLEGLRRRLRAMERDGQLVFTRRQCYALPE 80 
123440767  81 RLDLLRGTVIGHRDGFGFLRVEGSKDDLYLSAEQMKTAIHGDVVLAQPVGADRKGRREARIVRVLVPKTSQIVGRYFTDA 160
197287184  81 RLDLWKGKVIGHRDGYGFLRAEGQKDDLYLSQDEMKKTMHGDVILAQPLGMDRKGRREGRVVRVLEPRNSQIVGRYFIES 160
300721496  81 RLDLLKGTVIGHRDGYGFLRAEGHKEDFYLPADQMKMAIHGDVILAQPLRPDRKGRIEVRIVRVLEPKSSQIVGRYFMDA 160
290473407  81 RLDLLKGTVIGHRDGYGFLRAEGHKEDFYLPAEQMKMAIHGDVILAQPLQPDRKGRVEVRIVRVLEPKNSQIVGRYFVDA 160
253991547  97 RLDLLKGTVIGHRDGYGFLRVEGYKDDFYLSAEQLKMAIHGDVVLAQPLPSDRRGRSEARIVRVLVPKTSQIVGRYFLDS 176
50122543   81 KLDLLRGTVIGHRDGFGFLRVEGRKDDLYLSAEEMKRAIHGDVVLAQPLGEDRKGRREGRIVRVLEPRTGQIVGRYFVDA 160
261822839  81 KLDLLRGTVIGHRDGFGFLRVEGRKDDLYLSAEEMKRAIHGDVVLAQPLGADRKGRREGRIVRVLEPRTGQIVGRYFVDA 160
242238240  81 KLDLVRGAVIGHRDGYGFLRVDGRKDDLYLSADQMKLAIHGDVVLAQPLGEDRRGRREARIVRVLEPRTSQIVGRYFTEV 160
271501897  81 KLDLLRGKVLGHRDGYGFLRVEGRKDDLYLSAEQMKTVIHGDVVLAQPLGEDRRGRREGRIVRVLEPRTSQIVGRYFTEA 160
251788404  81 KLDLLRGTVLGHRDGYGFLRVEGRKDDLYLSAEQMKTVIHGDVVLAQPLGEDRRGRREGRIVRVLEPRTSQIVGRYFTEA 160
123440767 161 GTGFVVPDDGRLSFDILIPPDAINGARMGYMVVVELTQRPTRRTKAVGKIVEVLGENMGTSMAVDIALRTHEIPHTWPPQ 240
197287184 161 GMGFVVPDDSRLSFDILIPKEDIMGARMGNVVVVEVTTRPTRRTQAVGRIVEILGETMGTGIAVEIALRTHEIPHTWPPK 240
300721496 161 GMGFVVPDDSRLCFDILIPKEEVCGARMGNVVVVELMNRPTRRTKAIGKIVEVLGETMGTNMAVEIALRTHEIPHSWPPM 240
290473407 161 GMGFVVPDDSRLSFDILIPKEEICGARMGNVVVVELTSRPTRRTKAIGKIVEVLGETMGTNMAVEIALRTHEIPHSWPPM 240
253991547 177 GMGFVVPDDSRLSFDILIPRDESCGARMGNVVVVELITRPARRTKAIGKIVEVLGETMGTNMAVEIALRTHEIPHHWPPQ 256
50122543  161 GIGFVVPDDSRLSFDILIPKEEINGARMGFVVVVELTQRATRRTKAVGKIVEILGDNMGTGLAVDIALRTHDIPHTWPPK 240
261822839 161 GIGFVVPDDSRLSFDILIPKEEINGARMGFVVVVELTQRATRRTKAVGKIVEILGDNMGTGLAVDIALRTHDIPHTWPPK 240
242238240 161 GSGFVVPDDSRLSFDILIPPESICGARMGSVVVVELIQRANRRTKAIGKIVEVLGDNMGTGLAVDIALRTHEIPHTWSQQ 240
271501897 161 GTGFVVPDDSRLSFDILIPPECIAGARMGSVVVVELTQRGTRRTKAIGKIVEILGDNMGTGLAVDIALRTHEIPHSWPPK 240
251788404 161 GTGFVVPDDSRLSFDILIPPECIAGARMGSVVVVELTQRATRRTKAIGKIVEILGDNMGTGLAVDIALRTHEIPHSWPPK 240
123440767 241 VEKQVADLKEQVPEEAKKGRVDLRSLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPRTALDDEARSRG 320
197287184 241 VEKEIADLKEDVPESAKQGRVDLRDLPLITIDGEDARDFDDAVYCQRKKGGGWRLWVAIADVSYYVRPQTALDTEARSRG 320
300721496 241 VEKQVASLDENVPESAKQGRIDLRELPLVTIDGEDARDFDDAVYCERKRGGGWRLWVAIADVSYYVRPQTVLDTEARSRG 320
290473407 241 VEKQVVDLDENVPDSAKKGRVDLRGLPLVTIDGEDARDFDDAVYCERKRGGGWRLWVAIADVSYYVRPQTPLDTEARSRG 320
253991547 257 VENQVAFLDEQVPESAKEGRVDLRALPLVTIDGEDARDFDDAVYCERKRSGGWRLWVAIADVSYYVRPQTALDTEACNRS 336
50122543  241 VEDQVKDLSEEVPEAAKKGRVDLRKLPLVTIDGEDARDFDDAVYCEPKRGGGWRLWVAIADVSYYVRPNTPLDHEARARG 320
261822839 241 VEEQVKDLSEEVPEAAKKGRVDLRKLPLVTIDGEDARDFDDAVYCEQKRGGGWRLWVAIADVSYYVRPNTALDHEARARG 320
242238240 241 VQNQVADLTEEVPESAKKGRVDLRTLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPGTALDHEARARG 320
271501897 241 VEEQVSDLAEEVPESAKKGRVDLRSLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPGTALDHEARARG 320
251788404 241 VEEQVSDLTDEVPENAKKGRVDLRALPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPGTALDHEARARG 320
123440767 321 NSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTISAQGKLSSYKFYEAVMSSHARLTYTKVWRIIDGEESLREQY 400
197287184 321 NSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSEQGRLSSYKFYEAVMSSHARMTYTKVWKIIQGDEELREHY 400
300721496 321 NSVYFPSQVVPMLPEVLSNGLCSLNPEVDRLCMVCEMTISAQGKLSSYKFYEAVMNSHARLTYTKVWKILQGDQEQREHY 400
290473407 321 NSVYFPSQVVPMLPEILSNGLCSLNPEVDRLCMVCEMTISAQGKLSSYKFYEAVMNSHARLTYTKVWKILQGDQELREHY 400
253991547 337 NSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSAQGKLSSYKFYEAVMNSHARLTYTKVWRMLQGDEELREHY 416
50122543  321 TSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSTQGKLSSYKFYEAVMSSHARLTYTKVWNILQGDAELREHY 400
261822839 321 TSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSAQGKLSSYKFYEAVMSSHARLTYTKVWNILQGDAELREHY 400
242238240 321 TSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSTQGKLSGFKFYEAVMSSHARLTYTKVWHILQGDEALRGQY 400
271501897 321 TSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSTQGKLSGYKFYEAVMSSHARLTYTKVWSILQGDEALREHY 400
251788404 321 TSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSSQGKLSGYTFYEAVMSSHARLTYTKVWSILQGDEALREQY 400
123440767 401 KPLVPHLLELHTMYKALDQARAERGGIAFETEEAKFIFNAERRIERIESTVRNDAHKLIEECMILANIAAARFVEKHNEP 480
197287184 401 QPIVKDIEHLYELYQALDKAREQRGAIGFESEEAKFIFNAERRIDRIEPVVRNDAHKLIEECMILANIAAARFVEKNEEP 480
300721496 401 KPLVTHIEHLHELYQALEHAREERGAISFESEEAKFIFNAERRIERIEPVVRNDAHKLIEECMILANIAAARFVEKHHEP 480
290473407 401 QPLVTHIEYLHELYQALEQAREQRGAISFESEEAKFIFNAERRIERIEPVTRNDAHKLIEECMILANIAAARFVEKNNEP 480
253991547 417 KPLVQHIEHLHELYQALENAREQRGAISFESEEAKFIFNAERRIERIEPVVRNDAHKLIEECMILANIAAARFVEKNKEP 496
50122543  401 KPLVGGLEELHHMYKALEHAREVRGGIAFETEEAKFIFNAERRIDRVEAVVRNDAHKLIEECMILANISAAKFVEKNEEP 480
261822839 401 KPLVGGLEELHHMYKALEHAREVRGGIAFETEEAKFIFNAERRIDRVEAVVRNDAHKLIEECMILANISAARFVEKNEEP 480
242238240 401 QVLVEPLEELHRMYKVLDHAREERGGIAFETEEAKFIFNAERRIERVEASVRNDAHKLIEECMILANIAAARFVEKNSEP 480
271501897 401 QSLVEPLEELHRMYKVLEHAREVRGGIAFETEEAKFIFNAERRIERVEAVVRNDAHKLIEECMILANISAAKFVEKSEEP 480
251788404 401 QPLVAPLEELHRMYKVLEHAREVRGGIAFETEEAKFIFNAERRIERVEAVVRNDAHKLIEECMILANISAAKFVEKSEEP 480
123440767 481 ALFRVHDRPSDDHISALRSVLSELGLTLGGGLKPEPKDYAVLMDEVADRPDHEMLQTMLLRSMKQAIYDPENRGHFGLAL 560
197287184 481 ALYRVHDKPKEESVMNLRSVFNELGLTLPGGLTPEPGDYARVMKEVEERPDHEMLQTMVLRSMKQAIYDPENRGHFGLAL 560
300721496 481 ALYRIHDRPREESILNLRSVFNELGLSLLGGLKPEPKDYAQLMKDVAERPDHELLQTMLLRSMKQAIYEPENRGHFGLAL 560
290473407 481 ALYRVHDQPREESILNLRSVFNELGLSLLGGMKPEPKDFAQLMKDVAERPDHELLQTMLLRSMKQAIYDPENRGHFGLAL 560
253991547 497 ILYRIHDRPREESILNLRSVFSELGLTLPGGMTPMPKDYAQLMHQVAERPDRELLQTMLLRSMKQAIYDPENRGHFGLSL 576
50122543  481 ALFRVHDQPSEDHVLALRSVLGELGLTLKGGMKPQPKDYAELMNELADRPDREMLQTMLLRSMKQAIYDPENRGHFGLAL 560
261822839 481 ALFRVHDQPSEDHVLALRSVLGELGLTLKGGMKPQPKDYAELMNEVAERPDREMLQTMLLRSMKQAIYDPENRGHFGLAL 560
242238240 481 ALFRVHDRPSEDHVMALRSVLAELGLTLKGGMKPQPKDYAELMDEVAERPDHEMLQTMMLRSMKQAIYDPENRGHFGLAL 560
271501897 481 ALFRVHDQPSEDHVLALRSVLGELGLTLKGGMKPQPKDYAELMDSIADRPDHEMLQTMLLRSMKQAIYDPENRGHFGLAL 560
251788404 481 ALFRVHDQPSEDHVLALRSVLGELGLTLTGGMKPQPKDYAELMDSIADRPDHEMLQTMLLRSMKQAVYDPENRGHFGLAL 560
123440767 561 ASYGHFTSPIRRYPDLAMHRAIKYQL-----AKEHGNvKERWTPTGGWHSEYEDMLQLGEHCSMTERRADEATRNVADWL 635
197287184 561 KSYAHFTSPIRRYPDLALHRAIKYQI-----AKQQGHgSQRWTPTGGYHSDMDTMLQLGEHCSLTERRADEATRDVADWL 635
300721496 561 RAYSHFTSPIRRYPDLALHRAIKYLLskeklAQENEVvEHRWTPTGGWHNDMEHMLQLGDHCSMTERRADEATRDVADWL 640
290473407 561 SSYAHFTSPIRRYPDLALHRAIKYLL-----AQENGVvEQHWTPTGGWHNDMDHMLQLGNHCSMTERRADEATRDVADWL 635
253991547 577 NSYAHFTSPIRRYPDLVLHRAIKYLL-----AKQEGVvEHCGTPTGGWHSDIEHMLQLGEHCSMTERRADEATRDVADWL 651
50122543  561 TSYGHFTSPIRRYPDLSLHRAIKYLL-----SDRH----ERWTSTGGWHSDINEMLQLGMHCSMTERRADEATRDVADWL 631
261822839 561 TSYGHFTSPIRRYPDLSLHRAIKYLL-----SDRH----ERWTSTGGWHSDINEMLQLGMHCSMTERRADEATRDVADWL 631
242238240 561 TSYAHFTSPIRRYPDLSLHRAIKYLL-----GNRQ----ERWTPSGGWHSDFTEMLQLGQHCSMTERRADEATRDVADWL 631
271501897 561 TSYAHFTSPIRRYPDLSLHRGIKYLL-----SDRK----NRWTQSGGWHADFNEMLQLGEHCSMTERRADEATRDVADWL 631
251788404 561 TSYAHFTSPIRRYPDLSLHRAIKYLL-----SDRK----ARWTQSGGWHADFNEMLQLGQHCSMTERRADEATRDVADWL 631
123440767 636 KCDFMQDQVGKVFTGIIASVTGFGFFVRLDDLFIDGLVHVSSLDNDYYRYDNIGQRLIGESSGQVYRLGDTVEIRVEAVH 715
197287184 636 KCDFMLDQIGQQFTGIITSVTGFGFFVRLNDLFIDGLVHVSTLNNDYYQFDNVGQRLIGESSGQVYRLGDEVEVKVEAVS 715
300721496 641 KCDFMQDQVGNVFTGLITSVTGFGFFVRLNDLFIDGLVHVSTLDNDYYRYDNVGQRLIGESSGQTYRLGDEVEIRVEAVH 720
290473407 636 KCDFMQDQVGNVFTGLITSVTGFGFFVRLNELFIDGLVHVSTLDNDYYRYDNVGQRLIGESSGQTYRLGDEVEIRVEAVH 715
253991547 652 KCDFMQDQVGNIFTGIITSVTGFGFFVRLNDLFIDGLVHVSTLDNDYYHFDNVGQRLIGENSGQTYRLGDEVEIRVEAVH 731
50122543  632 KCDFMQDHVGEVFTGIIASVTGFGFFVRLKDLFIDGLVHVSTLDNDYYRYDNIGQRLIGESRGQVYRLGDEVEIRVEAVH 711
261822839 632 KCDFMQDHVGEVFTGIIASVTGFGFFVRLKDLFIDGLVHVSTLDNDYYRYDNIGQRLIGESRGQVYRLGDEVEIRVEAVH 711
242238240 632 KCDFMQDHVGEVFTGIISSVTGFGFFVRLNDLFIDGLVHVSTLDNDYYRYDNVGQRLIGESRGQTYRLGDEVQIRVDAVH 711
271501897 632 KCDFMQDHVGETFTGIISSVTGFGFFVRLNDLFIDGLVHVSTLDNDYYRYDNVGQRLIGESRGQTYRLGDEVEIRVEAVH 711
251788404 632 KCDFMQDHVGETFTGIISSVTGFGFFVRLNDLFIDGLVHVSTLDNDYYRYDNVGQRLIGESRGQTYRLGDEVEIRVEAVH 711
123440767 716 MDERKIDFALVSSTRKPRGEGKTARDKAKKadgqrtmrdtstgrgGRGSSSSS-----SRRdsapagsgqkrprRAKKP- 789
197287184 716 MDERTIDFSLISTTRKARNPGKTARVRALK---------------GGKDKKNAsssksRRR-------------DASKD- 766
300721496 721 MDERNIDFNLLSTTRKARNQGKTERDKAKK---------------GKPERKNG-----KKG-------------RDNKKs 767
290473407 716 MDERNIDFTLLSSTRKARNQGKTARDKSKR---------------GTPERNSG-----KKGy------------DHKKS- 762
253991547 732 MDERNIDFKLLTSTRKARNAGKTARDRAKK---------------AEPGRRDSs---kKGR-------------GYSKE- 779
50122543  712 MDERNIDFALISSTRKVRGEGKTARDRTKK---------------PDSREAKPs----RRR-------------RSPSKa 759
261822839 712 MDERNIDFALISSTRKVRGEGKTARDRTKK---------------PESREAKP-----SRRrr----------sPSKAA- 760
242238240 712 MDERNIDFTLVSTTRRVRGEGKTERDRAKK---------------GAAAERKP-----ARR-------------QAGKR- 757
271501897 712 MDERKIDFALISSTRKVRGEGKTSRDRAKRg--------------SDTGAKPP-----RRR-------------RTGQR- 758
251788404 712 MDERKIDFALISSTRKVRGEGKTARDRAKKg--------------SDAGTKPP-----RRR-------------RTGQR- 758
123440767 790 -ANFEPDSAFRPAd-------Aaakvd-------dkalaEKKAKAKAKRASAKTKKIAAATKAKRAKKKTSSD 847
197287184 767 -KNFEPDSAFRNG--------KsskekqskdkvikekiaKDKASTKRKKASAQTKKIEAKLKAKRAAKRTKA- 829
300721496 768 -ANFEPDRAFRKK--------Kkae-----------epkSSNKPSKKKKQSDKTQKITANLKAKRAKKSTGE- 819
290473407 763 -ANFEPDNASSKKk-------K-----------------AEKPKASKKKTSDKTKKITAKLKAKRVKKTQEKS 810
253991547 780 -THFEPDGVFRKKksv--------------------dkpQRNKEKGKKSLSAKTQKIAAKFKAKRAKKSAEK- 830
50122543  760 aANFEPDAAVRKE--------Gdrnats-----dkpkakPKKNRDKAKKNAEKTNKIAAATKAKRAKKKSAE- 818
261822839 761 -ANFEPDAAFRKEg------dRsattd-------kpkvkPKKNRDKAKKNAEKTRKIAAATKAKRAKKKSAE- 818
242238240 758 -VNFEPDSAFRAEgagkrkkaAeak------------pgGKKQASRTKKNAEKTRKIAAATRAKRAGKKKTAA 817
271501897 759 -ANFEPDSAFRPEgdgkkrqpAskdng-------kaktgGKKKAAKSQKNAEKTRKIAAATRAKRASKKNKTA 823
251788404 759 -SNFEPDSTFRSEggkrqpagk---------dkakpngsGKKKAAKSQKNAEKTRKIAAATRAKRADKKKKPT 821
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