2B1Y


Conserved Protein Domain Family
DUF1883

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pfam08980: DUF1883 
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Domain of unknown function (DUF1883)
Predicted ligand-binding domain of the PPC-like beta-sandwich fold. Observed in conserved gene neighbourhoods with diverse nucleotide-activated effector and related conflict systems, potentially recognizes invasive molecules and initiates system responses or directly triggers directly-associated effector domains.
Statistics
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PSSM-Id: 430353
Aligned: 10 rows
Threshold Bit Score: 125.585
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2B1Y_A          6 FRYTHYDLKELRAGTTLEISLS-SVNNVRLXTGANFQRFTELLDFKYLGGVAKKSPIRIAVPETXHWHLIIDAEGH--SG 82  Agrobacterium ...
CCZ09747        1 MNFTHYDLGNLDKGRMVEIILQgNAANVQLLDSSNFNNYRNGRQYRYIGGLAKKSPIRLQTTHSGHWHVAIDLRGM--RG 78 
vbi:Arad_2027   6 FRYSHYDLKEQRAGTVIEITLS-AIANVRLMNGSNFQRFTETLKHQFLGGVAKKSPIRLTIPETGHWHLVVDMEGH--NG 82 
CDA95851        1 MKYTVYDLGQCHLGERIQVSLQgNAANVRLMDSSNYSNYRSGRQHRYYGGLAKRSPIVLTIPRSGHWYVTIDLAGL--CG 78 
WP_015916040    6 FRFTHYDLKELRAGTILEVQLN-AINNVRLMTASNFQRFKEGLDYKFAGGVAKKAPVKIVVPEQAHWHLIVDMEGH--HG 82  Agrobacterium ...
CDD06885        1 MKYSYYDLGRLDKGQIVEVRLS-AAANVRLMDSSNYSSYKNGRRHRYYGGYVTKSPYRITVPSSGRWYVTIDLGGY--AG 77 
CBT75274        4 pEFAEYSWDFLERGSILVVILS-GPAHLRLMDPENFAAFQDGEEFDAFGGLARRAPYRIKVPHSGPWFLAIDVAGLnvRG 82 
jgi:Pmen_2157   1 MKFIH-QREHLEEGDLVVIQCS-QPCNIRLMNDANFRAFRNRGRHSYHGGAFIKFPAKIRVPSSGFWNITLDTVT----- 73 
Q88GA0          1 MKFVH-QREHLNEDDIVVIECS-QRCNIRLMNDANFRSFKNGGRHTYHGGHFEKFPAKITVPSTGFWNITIDTVTT---- 74  Pseudomonas pu...
Q880N8          1 MKFVH-QREHLNEDDLVVIECS-QTCNIRLMNDANFRSFKNGGRHTYHGGAFDTFPAKIAAPSTGFWNITIDTAGR---- 74  Pseudomonas sy...
2B1Y_A         83 LAESSVKXL 91  Agrobacterium fabrum str. C58
CCZ09747       79 SVRSSVRVL 87 
vbi:Arad_2027  83 LAESSVKMI 91 
CDA95851       79 SVRSSIIRL 87 
WP_015916040   83 LAESSVKMV 91  Agrobacterium vitis
CDD06885       78 SVKHSVQVL 86 
CBT75274       83 -VRHEVSVV 90 
jgi:Pmen_2157  74 --RRAVSMT 80 
Q88GA0         75 --R-PISVT 80  Pseudomonas putida KT2440
Q880N8         75 --KVDTNAG 81  Pseudomonas syringae pv. tomato
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