2PL3


Conserved Protein Domain Family
DEADc_DDX10

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cd17941: DEADc_DDX10 
Click on image for an interactive view with Cn3D
DEAD-box helicase domain of DEAD box protein 10
Fusion of the DDX10 gene and the nucleoporin gene, NUP98, by inversion 11 (p15q22) chromosome translocation is found in the patients with de novo or therapy-related myeloid malignancies. Diseases associated with DDX10 (also known as DDX10-NUP98 Fusion Protein Type 2) include myelodysplastic syndrome and leukemia, acute myeloid. DDX10 is a member of the DEAD-box helicases, a diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (motif II). This domain contains the ATP-binding region.
Statistics
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PSSM-Id: 350699
Aligned: 16 rows
Threshold Bit Score: 311.917
Created: 30-Jan-2014
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
ATP bindingDEAD box
Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:2PL3; Homo sapiens DDX10 with bound ATP, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 # # #  #                 ########                                      
2PL3_A        36 TLKGLQeaQYRLVTeIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLqwt-stDGLGVLIISPTRELAYQTF 114 human
AAZ11538      73 TQLGLErgGYKLLTpIQSDALHLALAGYDVLGAARTGSGKTLCFIVPLLELLYVEqwe-aeMGIGALVLSPTRELALQIF 151 Trypanosoma bru...
NP_573230     83 TQKALAesKFVHPTqVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNkws-rtDGVGAIIISPTRELAYQIF 161 fruit fly
EGD78972      66 TKKGLAdaGFIKPTrIQKATLKHALAGRDVLGAAKTGSGKTLAFLIPVLEKLNRErfs-rdLGIGAVVVSPTRELAQQTY 144 Salpingoeca sp....
XP_001922220  81 TLKGLLeaQYRQPTeIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLECLYREqwt-amDGLGALIISPTRELAYQTF 159 zebrafish
ADY41663      77 TLKGLEesNFKRPTeIQRDSLQYSLTGVDVVGAAKTGSGKTLALLIPLLECLWRQrwsrstDGLGALVISPTRELAYQTF 156 pig roundworm
Q5ZJF6        84 TLKGLQeaQYRMVTeIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELLYRLqwt-saDGLGVLIISPTRELAFQTF 162 chicken
Q54Q94       152 TLKALTesKFLKLTdIQRASLPHTLCGRDILGAAKTGSGKTLSFILPILETLWRNrwg-rdDGIGAIVLSPTRELAIQIF 230 Dictyostelium d...
CBK23092      73 TKKGLNeaGFTEMTdIQQKSLISALMGRDILGCAKTGSGKTLAFLIPALECLYRErwt-eeDGIGIVIISPTRELAMQIF 151 Blastocystis ho...
P0CQ83        71 TQKGLKssHFLNPTpIQSLAIPPALQARDILGSAKTGSGKTLAFLIPLLERLYLEkwg-pmDGLGAVVISPTRELAVQTF 149 Cryptococcus ne...
Feature 1                                                                        #               
2PL3_A       115 EVLRKVGknHDFSAGLIIGGkDLKHEAERINNINILVCTPGRLLQHMDEtvsfHATDLQMLVLDEADRILdMGFADTMNA 194 human
AAZ11538     152 KVLQLVGykHVMSAALLTGGrDVNEERKRVSAISIIVGTPGRVLHHLEDddslVTDNLQMLVMDEADRLLdMGFREVLSG 231 Trypanosoma bru...
NP_573230    162 ETLKKVGkhHDFSAGLIIGGkNLKFERTRMDQCNILICTPGRLLQHMDEnplfNTSTMEMLVLDEADRCLdMGFQKTLNS 241 fruit fly
EGD78972     145 NTLVQVAtgHEMSCALFIGGnNVKIEKTMAATRNIIICTPGRLVQHMDEtpnfGFDNLQVLVLDEADRLLdSGFKEEVDR 224 Salpingoeca sp....
XP_001922220 160 EVLRKVGknHEFSAGLVIGGkDLKDESEKIHRTNIIICTPGRLLQHMDEtatfHASDLHMLVLDEADRILdMGFADTLNA 239 zebrafish
ADY41663     157 HVLNKIGahHNFSAALLIGGtDVEFEKNRLATMNIVVCTPGRLLQHMDEnvsfSCEQLQILIIDEADRILdLGFQQQMNA 236 pig roundworm
Q5ZJF6       163 KVLRKVGknHDFSAGLIIGGkDLKEESERIHHINMLICTPGRLLQHMDEtsyfYASDLQMLILDEADRILdMGFADTMNA 242 chicken
Q54Q94       231 DVLKAVGkyHTFSAGLIIGGrNVQQEKDKINAMNILIATPGRLLQHMDEtygfDCSNLKILVLDEADRILdLGFSKCLNS 310 Dictyostelium d...
CBK23092     152 DVLCTIGkyHSFSAGLVIGGkDFEEEQSRIVSMNILVATPGRFLQHLEQtpgfDCSNVRGLVLDEVDRCLdMGFKTTIDH 231 Blastocystis ho...
P0CQ83       150 MQLRDIGkyHNFSAGLVIGGkPLKEEQERLGRMNILIATPGRLLQHLDStvgfDSSAVKVLVLDEADRLLdLGFLPALKA 229 Cryptococcus ne...
Feature 1                                                        
2PL3_A       195 VIENLPk---------KRQTLLFSATQTKSVKDLARLSLKNPEYVWVH 233 human
AAZ11538     232 ILKQLPt---------QRQTLMFSATQTTDVQMLGQMSLRNQRYVSAH 270 Trypanosoma brucei brucei strain 927/4 GUTat10.1
NP_573230    242 IIENFPp---------VRQTLLFSATQTNTVQDLARLNLKDPVYVGYG 280 fruit fly
EGD78972     225 IVSEMPp---------HRQTLLFSATQTAEVDELARLSLHNPVFINVH 263 Salpingoeca sp. ATCC50818
XP_001922220 240 IVENLPk---------SRQTLLFSATQTRSVKDLARLSLKDPEYVWVH 278 zebrafish
ADY41663     237 IVENLPs---------TRQTLLFSATQTKNVNDLARLALKDPVYVSVH 275 pig roundworm
Q5ZJF6       243 IIENLPk---------KRQTLLFSATQTKSVKDLARLSLKDPEYVWVH 281 chicken
Q54Q94       311 IVENLPr---------ERQTLLFSATQTKSIRDLARLSLQEPEYISVY 349 Dictyostelium discoideum
CBK23092     232 IVDSLGg---------DRQTQLFSATIDENVKTLASSILSNPVSINVN 270 Blastocystis hominis
P0CQ83       230 IVSHFSpvqtapgsrpSRQTLLFSATQSKDLAALAKLSLYEPLYISCN 277 Cryptococcus neoformans var. neoformans B-3501A

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