Conserved Protein Domain Family
delta_zeta_tubulin-like

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cd02189: delta_zeta_tubulin-like 
The delta- and zeta-tubulin families
The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.
Statistics
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PSSM-Id: 276958
Aligned: 62 rows
Threshold Bit Score: 288.781
Created: 5-Feb-2015
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative nucleotide binding site [chemical binding site]
Evidence:
  • Comment:based on sequence similarity to the structurally resolved tubulin proteins

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            ###  ##                                                                  
AAF09584    2 SIVTVQLGQCGNQIGFEVFDALLSDshssqglcsmrene----------------------------------------- 40  human
EPY38442    2 AIVCVLVGQCGNQLGDELLSQLAVItdkgk-------------------------------------------------- 31  Angomonas deanei
AAF61245    2 AIVVVQVGQCGNQLGEELWRQLSIAtdkga-------------------------------------------------- 31  Trypanosoma brucei
CCC46395    2 AIVVVQVGQCGNQLGDELWRQLSIAtdkga-------------------------------------------------- 31  Trypanosoma vivax ...
XP_817160   2 AVVVVQVGQCGNQLGDELWRQLKLTtnsga-------------------------------------------------- 31  Trypanosoma cruzi ...
CAJ09471    2 ATVHVFVGQCGNQVGTAFLDTVASEaeasvdegyqmrvsamhfrpalrppparrhhqrsatgpsrepseaarrighrqyy 81  Leishmania major s...
EPY35050    2 STAHVFVGQCGNQLGTAFLDTLAQEadesqseeyqllvssthfrpa---------------------------lkrpkvp 54  Strigomonas culicis
CCW63855    2 PTVHIFVGQCGNQLGPTFLDVLATEaqssgdeayqmlvsdd------------------------------------hfr 45  Phytomonas sp. iso...
CCC53702    2 ACVHVLVGQCGNQLGANLLQALTDEardssdeeyaaqisslhfrpap------------------------cfrssgsts 57  Trypanosoma vivax ...
AAF32301    2 ACVHVLVGQCGNQLGAHFLTALTDEarrcsdedyasqisadhfr------------------------------paptqk 51  Trypanosoma brucei
Feature 1                               ###  #                                                
AAF09584   41 ayqasckerffseEENGVPIARAVLVDMEPKVInqtlsk---------------------aaqsgqWKYGQHACFCQKQG 99  human
EPY38442   32 ---------vpspFFHSERKARFVLVDSEPKVVegfa-------------------------rrqkELIRPDNVVFGQSG 77  Angomonas deanei
AAF61245   32 ---------vrspFFTSNRKARCVMVDSEPKVVqtvy-------------------------nryaDIMRAENVVCGHSG 77  Trypanosoma brucei
CCC46395   32 ---------vrspFFTRDRLARCVLVDSEPKVVqavq-------------------------grhaDIMRKENTVCGNSG 77  Trypanosoma vivax ...
XP_817160  32 ---------lpspFFTRDRRARCVLVDSEPKVVtavy-------------------------erqkDVLRAENVIHGQSG 77  Trypanosoma cruzi ...
CAJ09471   82 slsyyaqekeraaMDTSLPQPRCVLVDMEPKVIaatvqrangqleqhksspssssspspqsasrrlYSLAPQQCVTRGEG 161 Leishmania major s...
EPY35050   55 akrtagaalsgtsVSRELPQPRCVMIDMEPKVIdqmvtrrngs--------------agdgeaaalYNLAPQQCVMQGSG 120 Strigomonas culicis
CCW63855   46 rhpaplatprpcvELASLPQPRCVMVDMEPKVMeraiarvngrvsd-------ppssslsssspprYWLSPQQCVSRGEG 118 Phytomonas sp. iso...
CCC53702   58 vgaglnnvngvsnANNESPLPRSVMIDMEPKVIesvvan---------------------vdsvgaFQLHTQQCVTRDEG 116 Trypanosoma vivax ...
AAF32301   52 girrggvsngnsgHHDEPPLPRSVMIDMEPKVVesvvtg---------------------vndggaFQVRAEQCVTRDEG 110 Trypanosoma brucei
Feature 1     ###                                                                      #######
AAF09584  100 SGNNWAYGYSVh-----------------------------gPRHEESIMNIIRKEVEKCDSFs---GFFIIMSMAGGTG 147 human
EPY38442   78 RGNNWALGYYGinvehskrsearsvgkdrafanlhrgqresdDNLIKRALQAIYMETRRTSDAeefeAIIVMHSLVGGTG 157 Angomonas deanei
AAF61245   78 RGNHWALGYYGlnnpkssrcaekaaa--srpfqvtkdqrrgdNFVVRDALRAIYAETRRTDDTeefeAILVLHSLAGGTG 155 Trypanosoma brucei
CCC46395   78 RGNHWALGYYGlsnpaskrnaekalp--hkpfqltrdqrqddNCVVRDALRAIYAETRRTKDAeefeAILLLHSLAGGTG 155 Trypanosoma vivax ...
XP_817160  78 RGNHWALGYYGvddplshraaenavv--arpfqvvkdqrrcdSHVVRNALRAIHAETRRTDDAmefeAIIVLHSLVGGTG 155 Trypanosoma cruzi ...
CAJ09471  162 SANNWAFGYHQq-----------------------------gQSRRDAIVECLRRESEQQGTVv--sTFHVLHSIAGGTG 210 Leishmania major s...
EPY35050  121 SANNWAYGYLQq-----------------------------gAKSRDAIEEALRREGEAAAASi--sTYHVVHSVAGGTG 169 Strigomonas culicis
CCW63855  119 SGNNWAFGYHHq-----------------------------gRSRREALAESLRREAEVCEAGv--gLLHVVHSAAGGTG 167 Phytomonas sp. iso...
CCC53702  117 SGNNWAFGYFAq-----------------------------gSSRSDDIAEALRRESECRGSVr---SFHVLHSAAGGTG 164 Trypanosoma vivax ...
AAF32301  111 SGNNWAFGYYEq------------------------------GSRCDEIVESLRRQSEARGAAh---SFHIVHSVAGGTG 157 Trypanosoma brucei
Feature 1                                                                # ##      ##         
AAF09584  148 SGLGAFVTQNLEDQYSns-----------------------------------lKMNQIIWPYGtGEVIVQNYNSILTLS 192 human
EPY38442  158 SGVASRLAEKIRLYFIeppegvrvdevyedkma----rmdgldgmmfekrraryLLSVTVAPQSlGEMCTQGINASLTLN 233 Angomonas deanei
AAF61245  156 SGMASLLLEKIRYYFIeptedelanadekaeadm--mwndgldgmlmhkrralfLISIAVAPQSiGEISTQSLNAALTLH 233 Trypanosoma brucei
CCC46395  156 SGMTSLLIEKIRYYFIepspwgegttpvdeleeaarmredgldgmlmekrramfLVSVSVAPQSvGEVATQGLNAAMTLR 235 Trypanosoma vivax ...
XP_817160 156 SGMATRLLEKIRYYFIepvdssltvdeceeaemm---rhdgldgmmmekrrasyLVSITVAPQAvGELSTQGLNAALTLH 232 Trypanosoma cruzi ...
CAJ09471  211 SGVSCLVAEEIKTMFPrs-----------------------------------tLLHSVVWPFRcGEVVTQWYNVVMAVS 255 Leishmania major s...
EPY35050  170 SGVSCLVAEVVKDLFPta-----------------------------------tLLHTVVWPFDcGEVVTQWFNTVLCMA 214 Strigomonas culicis
CCW63855  168 SGVGCLVGEVARELFPra-----------------------------------aLTHTVVWPFThGEVVPQGLNLTLCLA 212 Phytomonas sp. iso...
CCC53702  165 SGVGCLVSDIVRTDFPra-----------------------------------vILHSVVWPFStGEVVTQWYNCVLAMS 209 Trypanosoma vivax ...
AAF32301  158 SGVGCLVSDAIRVEFPra-----------------------------------lLLHTAVWPFAtGEVVTQWYNCVLAMS 202 Trypanosoma brucei
Feature 1                  #   #                                        #  ##  #              
AAF09584  193 HLYRSSDALLLHENDAIH---------KICAKLMNIKQi------------------SFSDINQVLAHQLGSVFQPTYsa 245 human
EPY38442  234 VLQKQTDAVILLRNDDAMtsg----neKRGSSSSTLVTra----------------sTFKEANEILISTLLPVFGFGVsg 293 Angomonas deanei
AAF61245  234 ALRIVDAVLLLRNDDCLRar------dDRAAGPRGARReeyisssss--lsllkpcaTFTEVNEVFVTLLMPVLLYGVge 305 Trypanosoma brucei
CCC46395  236 ALRNVDAVILLRNDDCIRvqrdtapgsGVQSRSASTKLaqgntedklassssvtslvNPCSTFTEVNEVFVTLLMPILly 315 Trypanosoma vivax ...
XP_817160 233 ALQENANAVLLLRNDDCI---------RVQEDSCAGGR-------------------PRGRGNTSFSTPSFSSIPSCAtf 284 Trypanosoma cruzi ...
CAJ09471  256 TLGGLADGVFIAYNDAIA---------EELKGARANRGfkda------------gevSFQLINQRISGVLAPLHLPQLly 314 Leishmania major s...
EPY35050  215 SLRDSVDGVFVAFNEDVA---------DQLRGRYATVGlpqk------------aevHFDAMNHRISRLLTPLHLPALly 273 Strigomonas culicis
CCW63855  213 TLRELVDGAFLAFNDVLG---------EDLRRAQGDPAsapat---------atdgvSFEALNTRIGRLLAPLFLPHGly 274 Phytomonas sp. iso...
CCC53702  210 ALRDSADGVFILYNDDFNt-------iNSSSLRRTTPSvapptceagsdkeetgtapAYIGINNEMSRLLLDLHLPHKlc 282 Trypanosoma vivax ...
AAF32301  203 ALRESADAVFVAHNDDFD---------VSARPLQKAVNgrt-------------sevSFDTINHEIGRLLLDLHLPKKly 260 Trypanosoma brucei
Feature 1                                                                                     
AAF09584  246 essf-----------------------------------hyrrnPLGDLmeHLVPHPe------fKMLSVRNIPhmsens 284 human
EPY38442  294 ------------------------------------------agSVGLLv-EHCAPRipritggnNILSLVPTPqrt--- 327 Angomonas deanei
AAF61245  306 -------------------------------------------sPICNL--VLSCSPshr--kmnNILTIVPTPqrh--- 335 Trypanosoma brucei
CCC46395  316 gr---------------------------------------gesPLCDLv-LKCSPNhrk---ihNILTVVPTPqrh--- 349 Trypanosoma vivax ...
XP_817160 285 keinevfltm----------------------llpillygrstnAVGELv-LKCSPNpre---inNILTILPTPqrh--- 335 Trypanosoma cruzi ...
CAJ09471  315 tlpspqkdlsknrilgtgsgaargvlgsgptgcvaegaaprryaTASDVieALSLDPa------mKFFTGSLAPqmvtgs 388 Leishmania major s...
EPY35050  274 avpppykavsantl--------------grgdgeaplpeplrfaRSEDLveALTLDPa------tKFFTGALVPklptgt 333 Strigomonas culicis
CCW63855  275 eiprpmrdlgkhriaesp-------aakelraragdaprrlrsaGYADVleGLCLDPa------rKFFTGVQLPperivg 341 Phytomonas sp. iso...
CCC53702  283 dvssplgegvarpqkpa--------ymskmqpalhvaealrsssGLADIveAVALDPa------lKFFSGVSLPvttsii 348 Trypanosoma vivax ...
AAF32301  261 pvpstapekkphpqstf---------pasrttsstgamaslrcgGLTDVveAVALDPa------lKFFSGLALPvtppdn 325 Trypanosoma brucei
Feature 1                                                                                     
AAF09584  285 l----ayttftWAGLLKHLRQMLISnakmeegidrhvwpplsglpplskmslnkdlhfnTSIANLVILRGkd-------- 352 human
EPY38442  328 --------yeaFKKSVLRGCFYPIQgakd--------------------------fmpgCKAHVPVEALLsqsamarfmi 373 Angomonas deanei
AAF61245  336 --------ylrFKESSILSRFYCITgaks--------------------------hlpsVCPTVPVELLHtsrslq---- 377 Trypanosoma brucei
CCC46395  350 --------ylrFKKSVILSRLYCVTgari--------------------------hlpgVHPDVPVGILHtdnslr---- 391 Trypanosoma vivax ...
XP_817160 336 --------ylrFKESATVSRLYVLRgakq--------------------------smpgVYPSVPIELIHtarslr---- 377 Trypanosoma cruzi ...
CAJ09471  389 t----twaavlGEAARTAQHSFTAPsalapsadtgfsrseg---kamtdrvadasafymQHRSCLWAIRGva-------- 453 Leishmania major s...
EPY35050  334 -----trwsavVEEAARRAQQAFTApsvfhtqs------------------glspygmnSPHTCLWTLRGye-------- 382 Strigomonas culicis
CCW63855  342 h----pspttwSSVLLEAARRVDEAftgpggfpsss------------sffpsgapfamGSRSCVWALRGyd-------- 397 Phytomonas sp. iso...
CCC53702  349 enrghtkinnsGPCLWKGLLNDAARvsedlfptsrrg----------nsalssttpfpcGGRAYLWSLRGsg-------- 410 Trypanosoma vivax ...
AAF32301  326 rv--vapeatsWYPLLCEASRRTGElfvpapsgdnn-------------tsnnlstafiEQRPLLWSLRGpa-------- 382 Trypanosoma brucei
Feature 1                                                                                     
AAF09584  353 -------------------vQSADVEGFKDPALYTswlk--pvnaFNVWKTQRAFsk-------yeKSAVLVSNSQFLVK 404 human
EPY38442  374 qkgevevprgkqrvfkdrwdDQTEEEQDKDSPPEIqeipvqapskLSAYYKKLKNapvts-lyeqiEGVLVMNEVRELNQ 452 Angomonas deanei
AAF61245  378 ---------------stdpvHSREEVKIPKPLYLSf--------vQPGSKKRSPAatll----teiEGVLVMNQARELNA 430 Trypanosoma brucei
CCC46395  392 ---------------aensvHTRGDVQVPKALLES----------FTGSPARRRSpasvl--lqnmEGVLVMNEARELNA 444 Trypanosoma vivax ...
XP_817160 378 ---------------npnlvTSREEVQVPKELLKGlket--aatrRSVSVALLQQm----------EGVLVLNEARELNA 430 Trypanosoma cruzi ...
CAJ09471  454 -------------------aHTDGIRELRHLMADIassp---fpmTSLFVSPAEEwratpsytrpdHSVTLYGPTPMVGA 511 Leishmania major s...
EPY35050  383 -------------------sRTTGMRELQRRMTAAdrfp---lsaLLVSPLTASRpsps----gadQEVTLYGPSPRIGA 436 Strigomonas culicis
CCW63855  398 -------------------vRREGLRELQDLMASRlpgg---fplTTLLVSPHERndaaw-yaradHEVSLYGHTPVIPR 454 Phytomonas sp. iso...
CCC53702  411 -------------------aFSEGYTELRNVLGLEaktpp-tplpTSLMIHEQSLra-------ypAHVSVFGLTRHIGT 463 Trypanosoma vivax ...
AAF32301  383 -------------------aCSEGLAHLREVLSRStpt----hdgRELYVPPSALllheerllgrrAHVSVFGPTHNIGL 439 Trypanosoma brucei
Feature 1                                                      
AAF09584  405 PL-DMIVGKAWNMFASKAYIHQYTKFGIeEEDFLDSFTSLEQVVASYCN 452 human
EPY38442  453 RLlFPLLRSAALKVKAGAFLSTYQDVGVeIRNIESAYHEVAEILSAAED 501 Angomonas deanei
AAF61245  431 QLlFPLLRTAAVKVKAGAFMSTFLDSGVaAERIQLAIKSVALKLADAEE 479 Trypanosoma brucei
CCC46395  445 SLlFPLLYMATMKAKVGAFMTTFVDAGMtVEQVQAAIRDAAERLADAED 493 Trypanosoma vivax Y486
XP_817160 431 AVlFRLLRSAAMKVKAGAFLSTFEDMGMtAECIQAAIREVATRLSAAEE 479 Trypanosoma cruzi strain CL Brener
CAJ09471  512 SL-ADAAGRAEELLHVGAFVHHFERYGVsKAELRDAAAVLYDTAAAYHL 559 Leishmania major strain Friedlin
EPY35050  437 GL-QRALERTEELLHVGAFAHHFEQYGVgKHELLDCTAKLWDTVAAYTP 484 Strigomonas culicis
CCW63855  455 AL-AEALRKVEDHLRVGAFLHHFERFGVeKATIEEATMKLWDTVAAYDA 502 Phytomonas sp. isolate EM1
CCC53702  464 RL-AAALERAEQLLRVGAFIHHFNNYSVgKKEMGDAILRMWDTVAAYSD 511 Trypanosoma vivax Y486
AAF32301  440 RL-ASALERAEDLLRVSAYVHHFSRYGVgEEELRDAVVRMWDTAAAYGA 487 Trypanosoma brucei

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