3ZRH


Conserved Protein Domain Family
OTU_ZRANB1

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cd22767: OTU_ZRANB1 
Click on image for an interactive view with Cn3D
OTU (ovarian tumor) domain of Ubiquitin thioesterase ZRANB1 and similar proteins
ZRANB1 is also called TRAF-binding domain-containing protein, Trabid, or zinc finger Ran-binding domain-containing protein 1. It is a deubiquitinase (DUB)/ubiquitin thioesterase (EC 3.4.19.12) that specifically hydrolyzes 'Lys-29'-linked and 'Lys-33'-linked diubiquitin; it also cleaves 'Lys-63'-linked chains with less efficiency. ZRANB1 binds, deubiquitinates, and stabilizes EZH2, which is the catalytic component of the Polycomb repressive complex 2 (PRC2) that silences gene transcription by methylating histone H3 at lysine 27 and is mutated or highly expressed in many types of cancer, including lymphoma, melanoma, prostate cancer, ovarian cancer, and breast cancer. Drosophila Trabid interacts with TGF-beta Activating Kinase 1 (TAK1), which triggers both immunity and apoptosis, resulting in reduced immune signaling output and K63-linked ubiquitination. ZRANB1 belongs to the OTU family of cysteine proteases that use a conserved cysteine and histidine, and in most cases an aspartate, as the catalytic triad. ZRANB1 does not contain the conserved aspartate, and uses cysteine and histidine as a catalytic dyad. It is classified as a family C64 cysteine protease by MEROPS.
Statistics
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PSSM-Id: 438604
Aligned: 24 rows
Threshold Bit Score: 304.221
Created: 21-Sep-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
active siteputative
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1: active site [active site], 2 residue positions
Conserved feature residue pattern:C HClick to see conserved feature residue pattern help
Evidence:
  • Comment:cysteine and histidine constitute the catalytic dyad for this group of OTU family cysteine proteases; in most members, an acidic residue (usually an aspartate) is also involved to make a catalytic triad

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                #                                       
3ZRH_A       162 RDVQKELEEESPiINWSLELat--rlDSRLYALWNRTAGDCLLDSVLQATWGiyDKDSVLRKALHDSLHDCShwFYTRWK 239 human
Q9VH90       480 RDAQKQLETPPPaLNWSLEIta--rlSSRMFVLWNRSAGDCLLDSAMQATWGvfDRDNILRRALADTLHQCGhvFFTRWK 557 fruit fly
NP_001123331 392 QNVQKELEEECA-INWSPSLmhtgdcNSRLYALWNRSAGDCLLDSVLQATWGvfDRDNVLRSAMSESLQDCAtsFFRRWR 470 vase tunicate
XP_002159244 388 TDVRKVLEEESL-INWSSELtn--qyGSRLCPLWNRAAGDCLLDSVLQATWGvfDRDNALRKKLFEALSEGQhrFFPRWQ 464 Hydra vulgaris
XP_003383951 423 LDVQKELQEEGPvINWSNEItn--nlQSRLYPLWNRTAGDCLLDSALQATWGvvDRDNHLRKALSDSLKNGSskFFEYWK 500 Amphimedon quee...
XP_002114722 392 RDVQNELEVNSTvINWSYEIte--dlDSKLYTLWNRTAGDCLLDSVMQVTWGvmDENAVLRRALRESLRCEDr-FYQRWR 468 Trichoplax adha...
KAB7503826   479 RDAQKQLEEVSPiINWSLEItd--rlGSRLYALWNRTAGDCLLDSLLQAAWGvfDRESVLRRALADSLSECAhiFYPRWK 556 Armadillidium n...
PAA91636     463 SAVQKELESVGA-VNWWPADs----gAFRMWALWNRTAGDCLLDSVLQASWGilDEDNSMRRALSESLHDCEdaFYSRWR 537 Macrostomum lig...
RNA00111     432 REVQKELEFESRiINWNVDIck--rlNSSLYPLWNRHSGDCLLDSVFQACYGvfDTDNILRRVMAESLEQYAafFKPRWK 509 Brachionus plic...
TGZ66415     223 TQAQTELEDDAKaINWWFIPgh--kqASRLFALWNRTAGDCLLDSVLQACWGifDRENVLRRTLSESLRACEasFYSRWH 300 Opisthorchis fe...
Feature 1                                                                                        
3ZRH_A       240 DWESWYSqsfglhfslreeQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGetLGYTRFQGVY 319 human
Q9VH90       558 EYEMLQAsmlhf--tledsQFEEDWSTLLSLAGQPGSSLEQLHIFALAHILRRPIIVYGVKYVKSFRGedIGYARFEGVY 635 fruit fly
NP_001123331 471 EWEQYQAqllgf--tfterQCLQDWAFINSLAQQPGAALEHCHIFVLAHILRRPIIVYGIKYLKSYRGdtLGFAKFQGVY 548 vase tunicate
XP_002159244 465 EAEEMQAsemny--sleeqQWKHDWANLVGLSAMAGSSLEQTHVFALAHILRRPIIIYGVKYVKSMRGesIDLARFEGVY 542 Hydra vulgaris
XP_003383951 501 ESELSHAhaqqf--nieeeQLKSDWSVILSSADRQGKPLEQIHIFVLSHILRRPIIVYGVKMVKNYRGeqLGLANFEGVY 578 Amphimedon quee...
XP_002114722 469 EAEAIQAsilef--sldeqQCVKDWSNIIDSARKKGAPLEQIHIFVLAHIMRRPIIVYGVKYVNSYKGetLGLARFQGIY 546 Trichoplax adha...
KAB7503826   557 EYERWQArllny--yvsenQILEEWAELVCLASQPGSALEQLHIFVLAHVLRRPVIVYGVKCVKSFRGedLGFARFEGVY 634 Armadillidium n...
PAA91636     538 DYEEQQLatsllcyslseaQWRRDWEALLRRARMPGESLEQIHVFALCHVLRRPIIILGVRIICNYRDepIAYSNFQGVY 617 Macrostomum lig...
RNA00111     510 EHEILMAnalny--rlddcQLDQDWNNILSLANQPGASLEQAHIFALCHVFRRPIVVYSVKYVKSFRGenIGFTHFEGVY 587 Brachionus plic...
TGZ66415     301 DYEALQAachyi---ldenQCRRDWDNVLSAASQPRGALEQIHIFALSHILRRPIIVYGVKYIKNYRDepIGIANFQGIY 377 Opisthorchis fe...
Feature 1                              #      
3ZRH_A       320 LPLLWEqsFCWKSPIALGYTRGHFSALVA 348 human
Q9VH90       636 LPLFWDqnFCTKSPIALGYTRGHFSALVP 664 fruit fly
NP_001123331 549 LPFLWDqvFCYTSPIALGYTRGHFTALVT 577 vase tunicate
XP_002159244 543 LPLLWDvdFCWKNPIALGYTRGHFSALVP 571 Hydra vulgaris
XP_003383951 579 LPLLWDstFCWRVPIALGYTRGHFSALVG 607 Amphimedon queenslandica
XP_002114722 547 LPLLWErsFCVSNPVALAYTRGHFSAVVG 575 Trichoplax adhaerens
KAB7503826   635 LPFLWEnsFCWKSPLALGYTRGHFSALVP 663 Armadillidium nasatum
PAA91636     618 LPLLWEraFCSRNPLCLAYTKNHFSALMP 646 Macrostomum lignano
RNA00111     588 LPLIWEasFCFKSPIALGYTKGHFTALVA 616 Brachionus plicatilis
TGZ66415     378 IPLLWDrsFCSPNPIVLGYTRGHFTALVP 406 Opisthorchis felineus

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