1KAG,1VIA,2SHK,1SHK,1L4U,1L4Y


Conserved Protein Domain Family
SK

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cd00464: SK 
Click on image for an interactive view with Cn3D
Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis of aromatic compounds, such as aromatic amino acids, p-aminobenzoic acid, folate and ubiquinone. Shikimate kinase catalyses the phosphorylation of the 3-hydroxyl group of shikimic acid using ATP.
Statistics
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PSSM-Id: 238260
Aligned: 109 rows
Threshold Bit Score: 114.575
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:ADP binding site [chemical binding site]
Evidence:
  • Structure:1L4U; Mycobacterium tuberculosis shikimate kinase with bound ADP

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             ######                                                                  
1KAG_A      6 NIFLVGPMGAGKSTIGRQLaqqlnMEFYDSD-QEIEKRTGa----DVGWVFDle-geEGFRDREek-------------- 65  Escherichia coli
1L4U_A      4 KAVLVGLPGSGKSTIGRRLakalgVGLLDTD-VAIEQRTGr----SIADIFAtd-geQEFRRIEed-------------- 63  Mycobacterium tube...
YP_007882  27 SVALIGLPLCGKTTWGQWLakkfeYAFIDTD-WLIQQKHPt---lTCREIFQlf-gqSYFRSLErd-------------- 87  Parachlamydia sp. ...
NP_618128   8 NITLIGMAGAGKSTIGKALakrlnYTFIDVD-GIITKRTGm----PLQALIDk----QGDSALIrye------------- 65  Methanosarcina ace...
YP_011733  15 CVTIIGMAGAGKTTVGRELarqmdWAHVDTD-SLIEATYG-----TVLQNVAdsmskEAFLDVEa--------------- 73  Desulfovibrio vulg...
NP_973046   2 IIFLIGMSRAGKTETGRALskklkAPFVDTD-SYMEEVYGk----TIRELYKah-geKKFRLKEfeclnkiiekiiekfs 75  Treponema denticol...
BAB21875   57 NIILMGPPGAGKTTVGRIIgqklgCCVIDVDdDILEKTWNm----SVSEKLQdv-gnEQFLEEEgk-------------- 117 crab-eating macaque
NP_829587   2 NLFLCGLPAVGKTLLGRALanylsISFFDTD-DLIVSNYDnglysSAGEIFQav-geEAFATLEv--------------- 64  Chlamydophila cavi...
Q9Z6M1      2 TIILCGLPTSGKSSLGKALakflnLPFYDLD-DLIVSNYSsalysSSAEIYKay-gdQKFSECEa--------------- 64  Chlamydophila pneu...
CAH17292    6 RIFIVGHHGAGKGLLAKSVaqllgWQFVDAD-LGLESHVGr----HLYEILGsh-gsEAFYECQfd-------------- 65  Legionella pneumop...
Feature 1                                                                      #          #   
1KAG_A     66 -------vINELTEk------qGIVLATGGGsvksret-rnrlsarGVVVYLETt----iEKQLARTQRdk----kRPLL 123 Escherichia coli
1L4U_A     64 -------vVRAALAd------hDGVLSLGGGavtspgv--raalagHTVVYLEIs----aAEGVRRTGGnt----vRPLL 120 Mycobacterium tube...
YP_007882  88 -------vIDDLKPt------kQVIIATGGGviyndqn-rnalkkyCRLIYLKLs----fSNWKERIFSqt----eLPAY 145 Parachlamydia sp. ...
NP_618128  66 -----eeaILELEQm------dNCIISPGGSvvyseka-mehlkkiSKIVFLDAp----fRSIVRRIPNar----kRGIV 125 Methanosarcina ace...
YP_011733  74 -------gIICRIGa------kRAVLSTGGSvvyraea-mrhlaslGPVVYLDVs----lPLILERIARnp----dRGLA 131 Desulfovibrio vulg...
NP_973046  76 scsndknaIYCECEnavhcddvNAIVSTGGGyaeneaiikklkdfpRIILIDTAp-----AEIFYRIKTsaykkgfYPAF 150 Treponema denticol...
BAB21875  118 -------aVLNFSAs-------GSVISLTGSnpmhdas-mwhlkknGVIVYLDVp----lLDLIHRLKLmk---idRIVG 175 crab-eating macaque
NP_829587  65 -------eALRSLPr------dNSVTALGGGtimhqea-ydiikhrGTLIYLSLp----vTEIYQRLLK-------RGLP 119 Chlamydophila cavi...
Q9Z6M1     65 -------rILETLPp------eDALISLGGGtlmyeas-yraiqtrGALVFLSVelpliyERLEKRGLPe------RLKE 124 Chlamydophila pneu...
CAH17292   66 -------iLKSLCTq------eHIVVTTDSSvvlalkn--cqllrnEMTVFLDVs----tPVQIERTARnsanllpVPSW 126 Legionella pneumop...
Feature 1                                                    #  
1KAG_A    124 hvetpp-----revleaLANERNPLYEEi--ADVTIRTd-----DQSAKV 161 Escherichia coli
1L4U_A    121 agpdra------ekyraLMAKRAPLYRRv--ATMRVDTn-----RRNPGA 157 Mycobacterium tuberculosis
YP_007882 146 isqeqss----dvslkkLYASRTLIYENw--ADQTIDMn-----GSMNND 184 Parachlamydia sp. UWE25
NP_618128 126 glrdr--------slkeLFEERLVLYKKy--ADFSIRLk-----GKENVQ 160 Methanosarcina acetivorans C2A
YP_011733 132 iapgq--------tiedLYNERKALYETyqdFTLTADTlt--peECGRAI 171 Desulfovibrio vulgaris subsp. vulgaris str. Hild...
NP_973046 151 lgeniknekdaedrffsIYERRIKIYKAl--ASFSINPk-----GLSPDE 193 Treponema denticola ATCC 35405
BAB21875  176 rnsgt--------smkdLLKFRRQYYKKw--YDARVFCe----sGASPEE 211 crab-eating macaque
NP_829587 120 erlkht------pnveeILKQRINRMQRv--ANYNFSLnhidlfDERSLL 161 Chlamydophila caviae GPIC
Q9Z6M1    125 amktk--------plseILTERIDRMKEi--ADYIFPVd-----HVDHSS 159 Chlamydophila pneumoniae
CAH17292  127 rdf-----------fdqLHDERDSLYKEv--ATLTVHGd-----DGKLEE 158 Legionella pneumophila str. Paris

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