Conserved Protein Domain Family
pgc

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cd20259: pgc 
polar granule component
Polar granule component (pgc) is implicated in primordial germ cell specification in Drosophila, which require transcriptional quiescence and three genes: pgc, nano (nos) and germ cell less (gcl), that act to down-regulate Pol II transcription. The microprotein pgc inhibits transcription elongation factor b (P-TEFb), which phosphorylates the C-terminal domain of the largest Pol II subunit.
Statistics
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PSSM-Id: 380770
Aligned: 18 rows
Threshold Bit Score: 67.7249
Created: 31-Jul-2019
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_001097411   1 MCDYQMEYSFIFEDSSCEgd---------------------------asMASYDNGFESMWHQVREELQREREMNELCQV 53  fruit fly
TDG39919       1 MCDYSCECKFEGKTFDKEfdrmwldiadelrlq-hestgigklfqhnqiGSPCDSGFEKMWRQTAEDLQREQEIAELTQR 79  Drosophila navojoa
NP_001097410   1 MFEYSFMFESSGCEGKFLgmpydgefeamwqq----ignelrsrhnrflGMPFDSGFERMWRQVREELKRDREDNELALC 76  fruit fly
XP_017078852   1 MRNFKHEYSFMFEYSKSEsrfiglpydrefelmwqqigdelrsrhnrflGMPFDSGFEKMWRQIRDELRRDQEDKDLALS 80  Drosophila eugr...
XP_016977234   1 MRHIKHEYSFMFDYSDCEskfigmpydrefelmwqqigeelrsrhnrflGMPFDSGFERMWRQIREELKRDKEVNDFALG 80  Drosophila rhop...
XP_017090736   1 MPSSEHEYAFTFDFNEKFigmpydrdfelmwq---qigeelrakhsrflGMPYDSGFERMWRQIRQELKSEQEVTKFALR 77  Drosophila bipe...
EDV55585       1 MFHSKYEYSFMFECSGCGskflgmpydgefetmwqqigeelrsrhnrflDMPFDSGFERMWRQVREELQREREDNQLALC 80  Drosophila erecta
EDW92117       1 MFNFKYEYSFMFESTGCGskflgmpydvefetmwqqigeelrsrhnrflGMPFDSGFERMWRQVREELKRDREDNQFALN 80  Drosophila yakuba
KMY95764       1 MFNFKFEYSFMFESSGCEgkflgmpydgefeamwqqigdelrsrhnrflGMPFDSGFERMWRQVREELKRDREDNKFALC 80  Drosophila simu...
EDV36573       1 MPDCENEYAFTFDFKNKFigmpydkefellwq---qigeelrakhsrflDMPYDSGFERMWRQIRLELKSDQEVTNFALR 77  Drosophila anan...
NP_001097411  54 FQQNLSLSPPVI 65  fruit fly
TDG39919      80 FWQKLNLKRKQS 91  Drosophila navojoa
NP_001097410  77 FQRNLSTYVKEE 88  fruit fly
XP_017078852  81 FNRNLTLTVKEE 92  Drosophila eugracilis
XP_016977234  81 FRRKLTLYAKEE 92  Drosophila rhopaloa
XP_017090736  78 FQRKLTITTHQR 89  Drosophila bipectinata
EDV55585      81 FQRNLTLYGKEE 92  Drosophila erecta
EDW92117      81 FQRNLTLYVKEE 92  Drosophila yakuba
KMY95764      81 FQRKLSIYVKEE 92  Drosophila simulans
EDV36573      78 FQRKLTISTLQD 89  Drosophila ananassae
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