6HU9,6GIQ,6YMX


Conserved Protein Domain Family
CcO_VIIa_fungal

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cd22888: CcO_VIIa_fungal 
Click on image for an interactive view with Cn3D
fungal cytochrome c oxidase subunit VIIa
The fungal cytochrome c oxidase subunit VIIa, encoded by the gene COX9, is a subunit of the cytochrome c oxidase (CcO, also called complex IV or CIV), the terminal oxidase in the mitochondrial electron transport chain which drives oxidative phosphorylation. CcO is a multi-chain transmembrane protein complex located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 14 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 11 subunits are encoded within the nuclear genome. The VIIa subunit is the fungal homolog to subunit VIc in higher eukaryotes. It is a single-pass membrane protein and its specific function remains unclear.
Statistics
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PSSM-Id: 438622
Aligned: 61 rows
Threshold Bit Score: 50.2494
Created: 6-Mar-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
oligomer
Conserved site includes 35 residues -Click on image for an interactive view with Cn3D
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Structure:6HU9; Saccharomyces cerevisiae cytochrome c oxidase subunit VIIa interacts with other subunits of the complex, contacts 4A
  • Comment:Subunit VIIa interacts with subunits 1, 2, 5A and 6

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1       ##### ## ### ### ### ### ### ### ##  ## ##  ##  #   #
6HU9_i        2 IAPITGTIKRRVIMDIVLGFSLGGVMASyWWWGFHMDKINKREKFYAELAERK 54  Saccharomyces cerevisiae S288C
RKO98748      5 IAPITGRYATRVKRDLAISLVLGFGAASaWWYGYHLPAFYKMKKYDELAKAEN 57  Caulochytrium protostelioides
TPX60740      8 VAPITGRFTRRVLFDLVGSISLGTGIAYyYWYRSHLPQMEEYKKYDQKVREEL 60  Powellomyces hirtus
RKO89591      7 VGPQVGRFRNRIIRDIVVSTSIGVAMAYtWWEGAHLPAAREWAAWDAEVKKES 59  Blyttiomyces helicus
XP_031026511  5 IAPLVGRFRKRVIFDVVGSCTLGTVLAFgYWHFIHTPQFNDYDNYFKKVQAEI 57  Synchytrium microbalum
Q6BPV1        3 IAPITGTLKRKIITDISIGFACGFALATgYWYIEHKPLIVKREAYYAKLKAQQ 55  Debaryomyces hansenii CBS767
PIA15467      7 LKPITGMLKKRIIRDLAIGLSSGFVCAEvYWYYFDKHLKRVDNYYAKHGRASD 59  Coemansia reversa NRRL 1564
PVZ97092      7 LKPIVGMFKKRIIRDVTIGLVAGSFGSYlFWEYGYGVNVRKTEAYYKKLQESE 59  Smittium angustum
KXS20793      3 IAKITGKFRKTIIRDISFGIGSGLILGYvFWEFEHKPKFAKIDAYYKNLAEQG 55  Gonapodya prolifera JEL478
XP_006678246  5 IAPITGRFRGRIVRDIVVSISIGTVAAYtWWYTVSRPTMSKWKAHDAKVKIEN 57  Batrachochytrium dendrobatidis JAM81

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