6GOV,6GOV


Conserved Protein Domain Family
N36

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pfam11438: N36 
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36-mer N-terminal peptide of the N protein (N36)
The arginine-rich motif of the N protein is involved in transcriptional antitermination of phage lambda. N36 forms a complex with boxB RNA by binding tightly to the major groove of the boxB hairpin via hydrophobic and electrostatic interactions forming a bent alpha helix.
Statistics
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PSSM-Id: 288317
Aligned: 2 rows
Threshold Bit Score: 61.4948
Created: 21-Aug-2024
Updated: 23-Aug-2024
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6GOV_N   5 DAQTRRRERRAEKQAQWKAANPLLVGVSAKPVNRP 39  Lambdavirus lambda
6GOV_N   5 DAQTRRRERRAEKQAQWKAANPLLVGVSAKPVNRP 39  Lambdavirus lambda
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