Conserved Protein Domain Family
YlmH

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COG2302: YlmH 
RNA-binding protein YlmH, contains S4-like domain [General function prediction only]
Statistics
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PSSM-Id: 441877
Aligned: 151 rows
Threshold Bit Score: 225.032
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015042758   1 Mi--TKTETVKKYaqDEESKLLLARALDKLDESEKKNIPVCTRFCNEQQRVLLGNALKASGNPRHFFWGGYEGAERTVLV 78 
WP_003516370   1 M---NKEVILRGIs-KAEDKLLVARILDKYTLSQKIMSYTHSDFLDPYQQNVVRKCLEMSGIRDHVFYGGFSGAERTVVV 76 
WP_012063922   1 Ml--NRDQYIEHIq-DEKLKLVAVKLLDKVEMVMRKHEVKYTNFLTPYEIKHMLAILNTFEEICFFAIGGHEDAERKTLV 77 
WP_015924149   1 M---DKNELLKMVs-KLEDRVLVSRLLDKIEQC-RYSSFAYSDFLSPYEASVSKKILDRVKEVFYKLTGGYDGAERVITV 75 
WP_014263052   1 MqksEKERRVSHIt-DTLLREKVLRVLDIVQQVLYTHEVKHSDFLTPYEQRELASVLNGIYDVRYSFDGMSEQSERKIVS 79 
WP_013362090   1 M---DKEKLTSFIk-NVELKKTIIKNLSKAEGVIDNYDIRNTDFMNPFEKKNFISILKGLDSIGFRECSPSAMPERSIIQ 76 
WP_014967843   1 Mi-gDKTKYIEHIq-DKEQHIVMRKILDKIESVLRHHDVEYTDFLDPYQRKLSHSILNRL-DVSYYEEGGLEDSERKSII 77 
WP_103080627   1 Mt--NRERILQKAt-NIEDKLLLSRILDRASKAEEICDFVWTDFLDPHQRNVAEKALTAMRDVDYAFSGGYDDAERVVIV 77 
WP_128425822   1 Ml--DRERLTSHIk-KPELLLKMRMLIDKAEIALNKHVVVDTDFIDPFERKTAMAIFNGIHNLGYLEAGGPEFAERKYFL 77 
WP_128752406   1 Mi-eDKNKYIANIk-DKNQILNARKLLDKIEKVIKSYTVCSTDFLDPYEIRISKSILNRFPEISYKEEGLIKNSERKIIL 78 
WP_015042758  79 FLPDYLEPEQViqddEYc-PLAFIRAEY-PADSGLSHRDFLGSLMGAGIKRETVGDILVGENSTDLIVLKEILPFLINNL 156
WP_003516370  77 FCPYYMPENIEs---EFsgFFEILKIKPnTR-ENFSHRDYLGSLMGLGIKREKIGDILVREDFAFVVVLKDIADYIRINL 152
WP_012063922  78 IFQAYLDPSDI----ES--PIAAIEIQSsTRFNQLMHRDFLGAILGLGIKREKIGDILLQDDICQVVITTELRDYVLLNL 151
WP_015924149  76 ISNDFIEEDIPy---ST--PISLLRISPvTE-NKLSHRDYLGSLLGLGIKREKIGDILVSEKCTDVFVIDKIAEYISYNL 149
WP_014263052  80 IYPDYLEESCQ----DI---LVCLKITGnTQFSKLSHRDYLGSILGLGLRREKIGDIFVVKDGAYIVCLQSVADYICFHL 152
WP_013362090  77 IFPEYIAEESL----EK--PYDIIKISGnFKFNKLSHRDYLGALLALGIKREKLGDIHVHEACAYIIADKNVSHYIMFNL 150
WP_014967843  78 IFPEYMSKENI----EN--PIKAIKIEGnFKFTNLRHKDYLGAILGLGIKREKVGDINIYEDFAIILLHKELLDFVIYNL 151
WP_103080627  78 FNPNFMSFEDL----DPgrIFKVIDVSVkGK-ETLSHRDYLGSLMGLGIKREKIGDILVREGSCSIITLSDIAEYIKYNL 152
WP_128425822  78 LFPDYMVQMDF----IE--YTSYLEISGd--INSLNHRDFLGSLMSMGIKRGKIGDIFIGEKSAIVSLKKEIGDYLLMNI 149
WP_128752406  79 IYPDYMSFEDV----KA--DLCPLSIRGr--FENLNHKDFLGAIMSLRIRREKIGDILIHKDETQIIVKNDIKDYLLYNL 150
WP_015042758 157 ESVGRVKIKTAIIPAGLLQIPEEKVLLLKDTVASLRLDSVVAAGFNLSRTKAGEYVESGKVMLNSLECDKTDKTVAEGDT 236
WP_003516370 153 TKVGNARVEIDIVNPDELDILEPKVKEISSTVASLRLDSVASAGFGISRSKTADLIRGEKVAVNWETATNPARLVKEGDT 232
WP_012063922 152 VKVGNMSVKVREIELEEIKAPDKVYKEIRLNVASLRLDAIVSAGFKLSRSEAHVLIQKQRCSVNWEVIDKPSNEVSCGDL 231
WP_015924149 150 DKIGNTKVHCELCDIYQFTPPQKKVRSINTTVASLRADSVASSGFGLSRTKVMDYFKAQKVNVNWELVQSPSKMLTEGDV 229
WP_014263052 153 EKVKNVSVKVNRVEKDEIALPKQEKRECEFVVSSIRLDSIVAGMFHLSRNDAKSLVQKELVSVDYEVISNPSKILEPPSV 232
WP_013362090 151 TSINKASITAKIIDEDDFEESIPNYQEKIITTSSRRADAVVSEIFNLSRAKIQEYILKERLYVDFELFTTNSREIKDGSL 230
WP_014967843 152 KNIGRENVTVRQISLGEIEKTKEEFEDIQTTISSLRLDALISGVCNLSRSKSANQIAQGKVKVNWQPILNASYEIGEDDV 231
WP_103080627 153 TKVGNSRVETEISEIEDLRLPERKVKEIRTTVASLRLDCITGAGYGISRTKASDLIKAEKVNVNWELETSLTRQLKAGDT 232
WP_128425822 150 QKVGNVNVKCSLISIDKVVFKEQAYERKDLFIASERLDVMLGAAFNLSRNESQAKIEAGDIKVNWESVEKSSYKLEPGDM 229
WP_128752406 151 KTVGKEKVYIEEIRQEDLKLPEEVYEDKKVSLSSLRLDVVMSNSYDLSRNESLEIIKLNKVKVNWQPISKSFFEVKEGDL 230
WP_015042758 237 LSLRGFGKIKLQEIGGLSKKGRQSIVIKKYV 267
WP_003516370 233 ISIRGKGRVVVEKVGNTTKKDRIHILLKKFI 263
WP_012063922 232 ISIRGKGRMIVENIEGTTRSGRTSIKLHKLI 262
WP_015924149 230 ISIRGMGRIVLEKVLGNTRKDRISIIIKRFE 260
WP_014263052 233 ISVRGFGKGTFEEVLYQTKKDRYKLRATILK 263
WP_013362090 231 ISLKGYGRAIFDEVISETKKGRMRARVKKVL 261
WP_014967843 232 ISIRGFGRIKIISELGKSKKGKDKVTVRIYK 262
WP_103080627 233 ISVRGKGRVVVEEIGCPTKKGRIGVLLKKFI 263
WP_128425822 230 ISARGLGRALYETRNGLSKKGRLNIALKIYK 260
WP_128752406 231 ISVRGYGRSKVISLDGISRKNKFRATVRIYK 261
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