Conserved Protein Domain Family
LC_FACS_bac1

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cd17641: LC_FACS_bac1 
bacterial long-chain fatty acid CoA synthetase
The members of this family are bacterial long-chain fatty acid CoA synthetase, most of which are as yet uncharacterized. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.
Statistics
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PSSM-Id: 341296
Aligned: 8 rows
Threshold Bit Score: 896.012
Created: 6-Mar-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
CAM75433      31 MREKEFGIWNLFTWTDYLNEVRRLALGLAATGvkRGDVVAILgkNRPEWVWGELAAHsIGALSMGVYQDsmnAEVAYLLN 110 Magnetospirillu...
NP_800662     34 MREKEFGIWREFTWQDYENRVKWMALALQDLGigEQDVVGLLgdNRPEWVWGELAAHaIKGYSLGIYQDsmhEEVAYLIN 113 Vibrio parahaem...
YP_143714     32 LREKDYGIWNEITYAQYYENVLLFAHGLLSLGfgPGERLAVIadNIPEWLYAELGAQaVRGISVGVYQSslpPEIAYMLQ 111 Thermus thermop...
YP_143852     22 LRVKRLGVWQKTSWRGLLDRVLSLAGGLSALGlkEGEVLAILghNAPEWVEAELAAQvLGALPMGIYADampEEVGYFLE 101 Thermus thermop...
YP_001634705  26 LREKDYGIWQTVTWRQFADHVRAFAMGLHALGvrRGDVIAILgdNRPEWLYAEFAAQtIGAMSIGVYQDsvaEEVYYIVS 105 Chloroflexus au...
YP_428590     38 LREKDLGIWKEVTWAEYGLMVRLYALGLKDLGveRGQVIALLgaNRPEWLWGEIAAHaLGCASLGIYKDvldDEADYLLA 117 Rhodospirillum ...
YP_352335     27 YREKEFGIWQVWSWAEAASEIRAIALGFLALGmqRGDHVAVVgrNRPALYWSMVAAQmCGAVPVPLYQDavaEEMVYVLD 106 Rhodobacter sph...
NP_772603     31 LREKDLGLWRVFTWNDYQTRVRDFALGLVELGlgHNDVIGIIgdNRPDWVAAEIATHaIGGLSLGLYRDvldEEASYLLN 110 Bradyrhizobium
Feature 1                                                                                        
CAM75433     111 YTAATVVLAEDEEQVDKLleiapevpslrYIVYFDPRGMRKYqddklifagdlrakgdelaarepgrfeaevnegKGDDV 190 Magnetospirillu...
NP_800662    114 YAKAKVVIAEDEEQCDKLlelgdeipsveYIIYCDPRGMRKYddprlidveqvykkgqlidkadpdkylnmvaatKGSDL 193 Vibrio parahaem...
YP_143714    112 YTGASVVLAEDQEQVDKLyeirseiphvrYVIYEDEKGMRGYkdpwllsfaevlergrehrrkhpdaverllleaSPEEV 191 Thermus thermop...
YP_143852    102 FTGARGIVVSDEEQLDKVyphl---hlvdFVLVWEEAGMSRHfrgkvrrfsqafg--------dpkvgeealrrrRPEET 170 Thermus thermop...
YP_001634705 106 AAGARVIVVEDQEQVDKIieiwprlegvlKVIYYEPKGMRNYrqpyladfpsieelgrtydrehpglfeaelaagKPDDV 185 Chloroflexus au...
YP_428590    118 HSGAVAVIAEDEEQVDKLltlaarvpslrHIVYCDPRGLRKYsdprlisqddlkargraldardpglyerevaagHGDDV 197 Rhodospirillum ...
YP_352335    107 HCGARFVICGDQEQVDKVievqdrihhieQVVYVDKRGMRKYdhsrmnwledvvaegraahrrfdeeldrriaelDYGST 186 Rhodobacter sph...
NP_772603    111 YGEAQLVFAEDEEQVDKLltladrvprlkHIIYSDPRGMRKYddprllsaekfaelgraraarepglydklvdatKGEDV 190 Bradyrhizobium
Feature 1             #                                        ##                                
CAM75433     191 SVLVTTSGTTSNPKLAMLQSGp-FLRHCTAYLRADeksaGENYVSMLPLPWImeqiYAVGQPLVCRNIVNFVEEpetqMP 269 Magnetospirillu...
NP_800662    194 SILCTTSGTTSKPKLAQLHSGt-FLDHCAAYLRADprspGDNYVSVLPLPWImeqvYVVGQALISRQIVNFVEEqetmMS 272 Vibrio parahaem...
YP_143714    192 CHLSSTSGTTGRPKAAMLRHRn-LIHMGVALQEVDpllpTDDYLSFLPLAWIgeqmMSVAMALTGGFAVNFPEEvetaLQ 270 Thermus thermop...
YP_143852    171 ALLAPTSGTTGRSKLAMLSHQnlLAGHEAVGKALGfq-rGAWVFSYLPLPWIgeqmLTVVQSLVEGSTVHFPEDpttlKE 249 Thermus thermop...
YP_001634705 186 AILSTTSGTTGKPKLAMLTHRn-MISQGAGLLSVDplgpDDEFVSFLPLAWVgeqmVTVAAGMQCGFTINFPESastvQE 264 Chloroflexus au...
YP_428590    198 AVLCTTSGTTARPKLAMLQAGa-FLRHCLDYLEADprhpGDDYVSVLPLPWImeqvYAVGQALIARGIVNFVEEeattMA 276 Rhodospirillum ...
YP_352335    187 CVMLYTSGTTGKPKGVVLSNRn-IIETSKNSVAFDglrpGDEVLAYLPMAWVgdfiFSVGQAMWTGFCVNCPESattmMN 265 Rhodobacter sph...
NP_772603    191 AILCTTSGTTSHPKLAMLAAGr-VLGHCATYLAFDpkgpDDEYVSVLPLPWImeqvYVLGKGLLCRMKINFVEEpdtmMN 269 Bradyrhizobium
Feature 1                    # ##  #                      ##                                     
CAM75433     270 DMREIGPHFVLLAPRTWEAIaaevrsrmmDSTRFKRFMFDLGMklgmqaldqgkr-----------swladrilfkaLRD 338 Magnetospirillu...
NP_800662    273 DLREIGPNFVLLAPRVWENIvadvsarmmDSTPFKQKMYKLGMslankaldqgkr-----------sklaewillraLRD 341 Vibrio parahaem...
YP_143714    271 DLKEIGPHVMFSPPRVWEGIqsqvwvrisESPWFNRFVYERLLkvgyraaeyrmrgrpmplglrlaywfadqvlfkpLRD 350 Thermus thermop...
YP_143852    250 DLKEVQPDFFLAPPRLWEEMasfiqsrmaDADPVKAFFYRAGMgalleganrefrgervglwlnlkralfypliarpLRA 329 Thermus thermop...
YP_001634705 265 NIREIGPRVMFSPPRIWENMlsqvqvkiqDSTPLKRAIFEWAMrqgyemadtrfsgkqpdlwlrlryglarllvfemLKD 344 Chloroflexus au...
YP_428590    277 DLREIGPRFVLLAPRVWEGIaadvrarmmDASPFKRAMFEIGMglgkralarnrr-----------swlaeallfraLRD 345 Rhodospirillum ...
YP_352335    266 DLREIGPTYFFAPPRVFEGQltnvmirmeDAGRIKKALFRHYMevarrvgpaildgrpvstadriaywigdkliygpLKN 345 Rhodobacter sph...
NP_772603    270 DLREIAPTFVLFAPRVWESIaadvrakvmDATPFKQRLFDIGMksglaaladgkr-----------sgfadailfraLRD 338 Bradyrhizobium
Feature 1                                         ######                                         
CAM75433     339 RIGFSYLKSAATGGAALGPDTFRFFlamGVPLRQIYGQTELaGAYTVHRGHDidFDSVGIPFDD-AQLRIDnpdhngVGE 417 Magnetospirillu...
NP_800662    342 RLGFSNLSSAATGGAAMGPDTFRYLqaiGVPLKQLYGQTEMcGAYTVHQADDvdYDSVGVAFDN-ADVKVInpdsngVGE 420 Vibrio parahaem...
YP_143714    351 QLGFLRLRRAYTGGAALGPDVFRFFhaiGVNLKQVYGQTEIiGIAFVHRDGDvrHDTVGLPIPG-TEVRISe-----AGE 424 Thermus thermop...
YP_143852    330 RLGLAACRIAVTGGAPLGPEVFTFFralGLDIRQVYGQSETaAATTAHATGDapPETVGPPLPG-TEVRISe-----EGE 403 Thermus thermop...
YP_001634705 345 HLGLRFLKRAYTGGAALGPDVFRFYhaiGVNLKQVYGQTESaGLSVIHRDGQikFQTVGTPLPN-TQIRIAe-----NGE 418 Chloroflexus au...
YP_428590    346 RLGFSFLTSAATGGAAMGPETFSFFhamGVPLKQLYGQTELaGAYVIHRAGDidPETVGLPFAK-SAVRIDnpdaegVGE 424 Rhodospirillum ...
YP_352335    346 TLGFSRVRVGYTAGEAIGPEIFDFYrslGINLKQLYGQTEAsVFITQQPDGQvrSDTVGVPSPG-VEVRIAe-----TGE 419 Rhodobacter sph...
NP_772603    339 RLGFTRLRSAATGGAALGPDTFKFFqamGVPLRTLYGQTELlGAYTLHPEGKvdPDTTGVPMADsVEIRIDnadvhgVGE 418 Bradyrhizobium
Feature 1                                        #            #  #        ####                   
CAM75433     418 IVAHTDGMFTGYYKNPEASKAdivdGNWLKTGDAGYIkkENGHLVVIDRIKDLATttHGVRFSPQFIENKLKFSPFIAEA 497 Magnetospirillu...
NP_800662    421 IIAKSTGMFTGYLNNQAAYDEdv-qDGWMHTGDAGYFk-ESGHLVVIDRLKDMSEtsHGDRYSPQFIENKLKFSPFIAEA 498 Vibrio parahaem...
YP_143714    425 ILLRSDAVCAGYWERPEATQEtf-gDGWLHTGDAGYLt-EDGHLVVIDRLSDVMRteKGTVFSPQFLENKLKFSPYIKEA 502 Thermus thermop...
YP_143852    404 IQVRGPQVFQGYFKQEKATREsfteDGFFRTGDAGFFd-ERGHLVILGRVKEVGAlaDGTRFAPQFLENRLKYSPYIREA 482 Thermus thermop...
YP_001634705 419 ILVKSPSVFVGYYQNPEATAEal-eDGWLHSGDAGYFd-EDGHLIVIDRAKDVMTlhDGTKFSPQFIENKLKFSPYIKEA 496 Chloroflexus au...
YP_428590    425 ILGRDQGLFAGYFGAGDATAIddlrDGWLHTGDAGFLkkENGHLVVIDRVKDLAVmsNGVRFSPQFIENKLKFSAFIAEA 504 Rhodospirillum ...
YP_352335    420 VFYRSPGTFVAYYKNPESTAStkdaEGWVATGDAGFFeeATGHLRIIDRAKDVGKmaDGRLFAPKYVENKLKFYPSILEA 499 Rhodobacter sph...
NP_772603    419 IVVRHPNMFLGYYKNPEASVAdv-kDGWMLSGDAGYFn-ANRQLVVIDRIKDLAEtsRGERFSPQFIENKLKFSPYIAEA 496 Bradyrhizobium
Feature 1                                                                          #             
CAM75433     498 VILGAEKpYLSALVCIRYSivsKWAEQkgiaFTNYTNLsaqeQVYELLRSEVEKVNATLPe-----PQRIRKFLLLYKEL 572 Magnetospirillu...
NP_800662    499 VVVGKGRpWLSAIICIRYAivaKWAEQkgiaFTNYTNLssqpEVYQAIREEVLKVNESLPd-----AQKISKFILLYKEL 573 Vibrio parahaem...
YP_143714    503 VVFGDRKpYLAAFINIDPQtvgKWAEDrglaYTTYLDLslkpEVAELIRKEVEKVNKELPe-----ELRIQRFVLLYKLL 577 Thermus thermop...
YP_143852    483 VVLGHGRpFVTALVELDPEnvqNWARRrglpFTTYQSLterlEVQALIAEEIRMVNQTLPe-----KLRIRRFALLPKEL 557 Thermus thermop...
YP_001634705 497 VVFGGDWpFVTAMINIDFAnvgKWAENaqisYTTYTDLaqkpQVYALIRKDVERANADLPp-----AARIRRFLLLHKEL 571 Chloroflexus au...
YP_428590    505 VILGRDRpYLAAIICIRWSilaKWAEQraisFTGYSSLaarpEVYALLRAEVERVNASLPa-----AQRVRKFLLLYKEL 579 Rhodospirillum ...
YP_352335    500 VVFGNGReRCTAFLNIDLAavgNWAERnniaYSSYQELaghpKVYEMMKGHVEEVNRSVAedpmlsGCQIHRFLILHKEL 579 Rhodobacter sph...
NP_772603    497 VVLGAGRdALAAMICIRYSiisKWAEKnrlsFTTYSDLasrpEVYTLLQKEVETVNATLPp-----AQRISRFLLLYKEL 571 Bradyrhizobium
Feature 1                              
CAM75433     573 DADDGELTRTRKVRRGVINDKY 594 Magnetospirillum gryphiswaldense MSR-1
NP_800662    574 DADDGELTRTRKVRRGVVAEKY 595 Vibrio parahaemolyticus RIMD 2210633
YP_143714    578 DADDEELTRTGKVRRGHIAKKY 599 Thermus thermophilus HB8
YP_143852    558 HPDDEEITRTRKVRRQIVEARY 579 Thermus thermophilus HB8
YP_001634705 572 DADDGELTRTRKVRRRLVAQRY 593 Chloroflexus aurantiacus J-10-fl
YP_428590    580 DPDDGELTRTRKVRRGVVAEKY 601 Rhodospirillum rubrum
YP_352335    580 DADDGEMTRTRKVRRKVIEEKY 601 Rhodobacter sphaeroides
NP_772603    572 DADDGELTRTRKVRRSVINEKY 593 Bradyrhizobium

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