1XAG,3OKF,3ZOK,3QBD,5EKS,5HVN,2D2X,1DQS,3CLH,1DQS,1UJN


Conserved Protein Domain Family
DHQS

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cd08195: DHQS 
Click on image for an interactive view with Cn3D
Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis
Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway, which involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds, is found in bacteria, microbial eukaryotes, and plants, but not in mammals. Therefore, enzymes of this pathway are attractive targets for the development of non-toxic antimicrobial compounds, herbicides and anti-parasitic agents. The activity of DHQS requires nicotinamide adenine dinucleotide (NAD) as cofactor. A single active site in DHQS catalyzes five sequential reactions involving alcohol oxidation, phosphate elimination, carbonyl reduction, ring opening, and intramolecular aldol condensation. The binding of substrates and ligands induces domain conformational changes. In some fungi and protozoa, this domain is fused with the other four domains in shikimate pathway and forms a penta-domain AROM protein, which catalyzes steps 2-6 in the shikimate pathway.
Statistics
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PSSM-Id: 341474
Aligned: 729 rows
Threshold Bit Score: 228.867
Created: 30-Jul-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1XAG; Staphylococcus aureus 3-dehydroquinate Synthase (DHQS) in complex with Zn2+, NAD+ and substrate analogue carbaphosphonate, contacts at 3.5A
  • Comment:Substrate binding causes structural conformation change.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                      #                                              
1XAG_A     11 NYPIYVEHgaikyig-----tylnqfdQSFLLIDEyvnqyfanKFDDILsy---enVHKVIIPaGEKTKTFEQYQETLEY 82  Staphylococcus aureus
OLD64703    5 SYDVRIGRgvaprmtva--lrkrplaqRYILVTDShltr-qgdALQAAFrrr-glsADLISFPaGEGSKSRRVRDEIEDG 80  Acidobacteria bact...
OGP58991   20 SYEIVVGEnlfprlvrd--lcrqplghRYVVISDStvvklygrKLIRLLqea-glrADGLIFRaGEKSKTRPVKQRLEGG 96  Deltaproteobacteri...
EKU95219   17 SYPLVIGRdledelgqi-lagpelaarRVAIITDSnvarlkagAIRQMLrns-grgAEIFVFSaGEENKTRATKEQLEDA 94  Actinobaculum mass...
OAB39561   15 SYDIEVGSnlygklsrdlkdgiienvnRYAIITDSnvkdlfgeHLLNLLrnd-gfyVEMFTFPsGEQNKTRETKAQLEDQ 93  Paenibacillus macq...
EDM26552   15 SYDIQIGFnlfstliedlknglfpkanKLALITDSnvlplyasNLILAIkee-gftVELFSMPaGEHSKTRETKIRLENE 93  Lentisphaera arane...
OLB66464   15 SYDILVGPgllnqlgti--vpeycpgaAYAVISDShvgkvygeELVQRLsas-gqrTELFTFPaGEWNKTRDTWASLSDG 91  Gemmatimonadetes b...
OGF97079   15 SYKILIAPglfeqaasr--larlfggcAFVVVSDSnvaglyaaALTAKLrelgrrvAAPIVFPaGEQSKSRRVKSRVEDR 92  Candidatus Glassba...
OGE19909   15 SYDILIGEdllrrvpwe--ikesglayKFAIVTDStveglygnALLEEFera-gldTHIIAFPaGEKQKSRETKARIEDH 91  Candidatus Dadabac...
BAK47720   15 SYTIEIGQhlaqqladdlagglagrvsKFAIITDSeveplyaaPIAAELtkr-gmkNDTFVIPaGEQSKTREMKAELEDQ 93  Clostridium sp. SY...
Feature 1                     ###  #  #                ## #                  #  #             
1XAG_A     83 IlshhvtRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKqGKNLIGAFYrPTAVIYDL 161 Staphylococcus aureus
OLD64703   81 ViglgagRDTALVALGGGVVGDLTGFVAATFNRGIPYIQVPTTLIGMvDSAIGGKTGINHPaGKNLIGAFHqPAAVYVDV 160 Acidobacteria bact...
OGP58991   97 LarlgvgRDGAILAVGGGVTGDLAGFVAATYYRGIPYLQVPTTLLAMvDSSIGGKTGVDTRhGKNLIGAFYqPKRVYADV 176 Deltaproteobacteri...
EKU95219   95 MiaagfnRDSVIVAVGGGVVTDLAGFIAATFTRGIPYVSYSTTLVGAaDAAIGGKTAVDTPaATNLIGAFHqPRAVLIDI 174 Actinobaculum mass...
OAB39561   94 MlaksygRDSCIIALGGGTVSDLSGYLAGTYCRGIPYINYPTTLLAAaDASIGGKTAVNTPvATNLIGVFHqPRKVYIDL 173 Paenibacillus macq...
EDM26552   94 MldkgfgRDSAVIALGGGVVSDLAGFLAGTFGRGIPFANYSTTLLSAaDASVGGKTAVDTPhATNLIGLFNqPVKVYIDI 173 Lentisphaera arane...
OLB66464   92 MlaaqfgRDCAVIALGGGVVNDVAGFVAATYLRGVPLVQVPTSLLAMiDSSIGGKTGVDVPaGKNLLGAFHqPRVVVADP 171 Gemmatimonadetes b...
OGF97079   93 MfrsglgRDTVVVALGGGVVGDVAGFVAATYARGVELVQIPTSLLAMvDSSIGGKTGLDVPwGKNLIGAFHqPAIVLIDP 172 Candidatus Glassba...
OGE19909   92 MlenkfgRDSAVVALGGGVVGDIAGYVAATYTRGIPYIQVPTTLVACvDSSIGGKTAVDTPhGKNLIGAFHqPWRVYIDV 171 Candidatus Dadabac...
BAK47720   94 MlaagyrRDCCVIAAGGGVVTDLAGFLAGTYGRGVPFVNYATTLLAAaDASVGGKTAVDTPlATNLIGLFHqPKKVYIDL 173 Clostridium sp. SY...
Feature 1      #       #      #   #                                                           
1XAG_A    162 DFLKtlPFKQILSGYAEVYKHALLngESATQDIEQhfkdrei-----lqslngMDKYIAKGIETKLDIVVADEKEqg-vR 235 Staphylococcus aureus
OLD64703  161 DYLKtlPDRHYVSGLAEVIKCGVIadRVLFASLETqieril------rrepdlMSRVIEACCRIKARVVMGDPREss-rR 233 Acidobacteria bact...
OGP58991  177 LTLTtlPPREFISGLAEVVKHAVIgdRTLFRFLEQfglrll------ardpavMAQIVRRNLLIKAALVEADPLEqn-lR 249 Deltaproteobacteri...
EKU95219  175 ATWAslDAPKICDGMAETVKHACIadADFFARLEDafvnrgmgpeefvrdadlAEYTARRNAQIKQDFVQSDVHEgn-rR 253 Actinobaculum mass...
OAB39561  174 ITWGtlPYRQIRSGLAETIIHACLgdINFFQYLENniarlyspnnelsldnevCEHIAFKNCEIKFRVVEKDDEEkn-fR 252 Paenibacillus macq...
EDM26552  174 ATWStlPDREVRAGLAETIKHACLadAEFFAWLEAnitkiasae-dakldaeaCEFIAEANCRIKYDVVSRDEKEan-lR 251 Lentisphaera arane...
OLB66464  172 ELLAslSSVQLAAGLAEAVKHGVIadAAYFAFLEAeyaaif------akhapaLERVVRRSVEIKASVVAQDEREkg-kR 244 Gemmatimonadetes b...
OGF97079  173 RLLGtlDPAQFRAGMAEVVKHAVIrdRPLFKFIEAnlagii------rkdeelLAELIARNCRIKAAVVEEDEREsn-lR 245 Candidatus Glassba...
OGE19909  172 NTLLtlNEKEIREGLAEVIKYGVIkdDDLFLFLERnmdsvf------sydkgaLTRIIKRGCEIKGEVVEKDEREsn-lR 244 Candidatus Dadabac...
BAK47720  174 AAWStlPKRQICSGLAETIKHACLadSAFFEYLEAhmedll------rldpdaCLHIAEENCRIKYQVVMQDEKEtsglR 247 Clostridium sp. SY...
Feature 1           #   #           #                                                         
1XAG_A    236 KFLNLGHTFGHAVEYYhk--ipHGHAVMVGIIYQFIVAnalfd---skhdiSHYIQYLIQLGypldm--------itdld 302 Staphylococcus aureus
OLD64703  234 KILNFGHTIGHAIETLsg--frLAHGEAVSIGMVAEAGiaarlgllaagavERISALCDRVGlptav--------ppaft 303 Acidobacteria bact...
OGP58991  250 RVLNYGHTLGHALEALsgyrmlHGEAVSLGMVLEGKLAkalgyf--peeeyLRQNALLRHFGlpvspgpalktwldrkvs 327 Deltaproteobacteri...
EKU95219  254 MGLNLGHTIGRALEAAlnyrwaHGECVAVGLNLQARLGvgfgyi--saadqLRLERLLAAIGlptqi--------pdgvs 323 Actinobaculum mass...
OAB39561  253 KVLNLGHTAGRAIEALsnynllHGEAVAIGLAFQAYLGkklnfn--tideyRRIINLLKLAElptei--------pndik 322 Paenibacillus macq...
EDM26552  252 QVLNLGHTAGRAMETLfeyqllHGECVAVGLSIQALLAnkleli--sdedhRRVDALIALCGlptev--------peeis 321 Lentisphaera arane...
OLB66464  245 AILNFGHTVGHAIEATskyavlHGEAVAIGMVYEGRLAealgia--atgtaQRITAALERLNlpver--------pdasq 314 Gemmatimonadetes b...
OGF97079  246 QILNFGHTVGHAVEACcgyrllHGEAVAAGMCVEADLArrmgll--ageaaRQVSALLQRLKlpvdla-------glkis 316 Candidatus Glassba...
OGE19909  245 KILNFGHTIGHAVENLsdykitHGEAISIGMAAEGKIAvgmglw--keeelGRLTRLLTRAGlptsm--------peymk 314 Candidatus Dadabac...
BAK47720  248 EVLNLGHTVGRAIETVsgyrllHGEAVAIGLAAQARLAaelgfm--seaeeARVTELLRRAQlpvqi--------peyid 317 Clostridium sp. SY...
Feature 1                                                        
1XAG_A    303 FETLYQYMLSDKKndkqgVQMVLMRQFGDIvvqh-------vdqLTLQHAC 346 Staphylococcus aureus
OLD64703  304 PADILQVARRDKKnrlgrIVYALPIRIGAMasergdy-aitaddVLVTEIL 353 Acidobacteria bacterium 13_1_40CM_2_68_5
OGP58991  328 ADEIIAWTFSDKKakkgkPEYALPARIGRMkkirgqv-glpveaGLIKEVL 377 Deltaproteobacteria bacterium RBG_13_61_14
EKU95219  324 VQAIMAAMKHDKKaaggqIRFVFQDGIGALrlfaqgsysravsaAQIEAFL 374 Actinobaculum massiliense ACS-171-V-Col2
OAB39561  323 SVDLINKMYTDKKvrnsqIHFVFQDGIGKMkqfnsgdysipiseELLLESL 373 Paenibacillus macquariensis subsp. macquariensis
EDM26552  322 TEELVEKMYTDKKvrsgqIRFVLMDGIGAMktfen----gsytkALADDFL 368 Lentisphaera araneosa HTCC2155
OLB66464  315 VDDLIAAMRADKKvrageIRLALPRAIGSAhgddgngwtvpvneATIRQVL 365 Gemmatimonadetes bacterium 13_2_20CM_2_66_5
OGF97079  317 AEKLIELTALDKKarqgrPKYALPCAVGEMaravggsyvhevdeRLAREAL 367 Candidatus Glassbacteria bacterium GWA2_58_10
OGE19909  315 IENIIDTMKLDKKsrggkIEMVLPETIGRMaeidgsy-glktdeSLIRDAV 364 Candidatus Dadabacteria bacterium RIFCSPHIGHO2_...
BAK47720  318 RETLVKKLYTDKKvrdgrIRFVLEKGIGSVmrfadgsyslpvteEQARRII 368 Clostridium sp. SY8519

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