Conserved Protein Domain Family
ICE_PFGI_1_parB
?
TIGR03764: ICE_PFGI_1_parB 
integrating conjugative element, PFGI_1 class, ParB family protein
Members of this protein family carry the ParB-type nuclease domain and are found in integrating conjugative elements (ICE) in the same class as PFGI-1 of Pseudomonas fluorescens Pf-5.
Links
?
Statistics
?
PSSM-Id: 213858
Aligned: 14 rows
Threshold Bit Score: 403.224
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Download Cn3D
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
WP_001029723  30 IMPTSEMPMVLTLDEVAPNPDNPRTTRNPKYDEIKESIRARGLDTVPKVTKNPDIPGspYIFSDGGNTRYAILRELFAET 109 Salmonella ente...
WP_012105823  16 ALPVSEMAMVLTLDQLRPNPDNPRATRNPKFEDIKASIRSRGLDSIPKVTRDPDGEDa-YIFSDGGNTRYQILCELWQET 94  Yersinia pseudo...
WP_011145390  27 VLPMAEMPMVLTLDELQPNPDNPRLSRNPRFDDIKASVRARGLDSVPKVTRDPEDSGnvYIFSDGGNTRYQILCELWKET 106 Photorhabdus lu...
WP_029996167  29 SDPIADTPMVVTLDQLRPYDHDPRKKRNSAYDEIKASIRERGLDAAPAITRRPGDTH--YIIRNGGNTRLAILRELWAET 106 Xanthomonas axo...
WP_011092140  28 ALPVNEMPMVLTLDQMGPHPDNPRTKRNPKYNEIKESIRHRGLDTVLKVTRDPNVPDi-YVFSDGGNTRYEILSELWEET 106 Pectobacterium ...
WP_011817115  31 VLPVSEMAMVLTLDQLRPNPDNPRTTRNRKFEDIKASIRTRGLDSIPKVTRVPDGEDv-YIFSDGGNTRYQVLCELWQET 109 Yersinia entero...
WP_011793741  29 TDPIADTPMVVTLDQLRPYDLNPRVTVNPLYPEIKASIRERGLDAAPAITRRPGAAH--YMIRNGGNTRLAILRELWAET 106 Acidovorax citr...
WP_011334392  28 SDPVTDTPMVMTLEQLRPYEHNPRFIRNPLYDDIKASIRERGLDQPPPITRRPGETY--FIIRNGGNTRLSILGELWQET 105 Pseudomonas flu...
WP_011267075  30 PDPIVDTPMVLTLDEMKAFEQNPRTVTNAKYKEIKDSIRQRGLDHRPTVTRRPGEIK--YTINNGGNTRLQILRELYSET 107 Pseudomonas syr...
ADI95370      61 AAPAGDTPMVVSLEQLRPYELNPRVVRNPLYGDIKASIRERGLDQPPAITRRPDESH--FIIRNGGNTRLSILGELWQET 138 Pseudomonas put...

WP_001029723 110 QDERFYRFHALFKPW---P--GRLECLVGHLAENDVRGDLTFIDKALGIKKARAIHEETL-GRTVTLRELADLLGQQGYP 183 Salmonella ente...
WP_012105823  95 GDDRFYHIHSIFKPW---P--GRLQCVIGHLAENEIRGDLTYIEKALGIHKARILWEEQQ-GRGVSLRELSEFLNQQGYP 168 Yersinia pseudo...
WP_011145390 107 GEERFFRIPCLFKPW---P--GRLQCVIGHLAENDVRGDLTFIEKALGVFNASSMHEKCL-GRPISQRELTDLLKQEGFP 180 Photorhabdus lu...
WP_029996167 107 KDERFFRISCLFRPW---ParGEIVALTGHLAENELRGGLTFIERALGVEKAREFYEEES-GATLSQSELARRLVADGYP 182 Xanthomonas axo...
WP_011092140 107 QEERFFRHTVIFKPW---P--GRLQCVIGHLAENEVRGELTFIEKAFGIQKARGIYEEQL-GKSVSLRELATLLTEAGLP 180 Pectobacterium ...
WP_011817115 110 GDERFYRIHTIFKPW---P--GRLQCVIGHLTEDEIRGELTYIEKSFGIHKARTIWEDEL-GRVVTLRELSQLLNQQGYP 183 Yersinia entero...
WP_011793741 107 KDERFFRIPCLFRPW---PerGEIIALTGHLAEGELHGKLTFIERALGVEKARELYESENgGKPISQMELARRLAADGYP 183 Acidovorax citr...
WP_011334392 106 RDERFFRIHCLFRPW---T--SEITALLGHLVESDLHGQLTFIERALAVLKLKTMLEAG--GAALSQRELARRLAAGGYP 178 Pseudomonas flu...
WP_011267075 108 GEDRFYRHNVLFRPWdsaR--GEIIALTGHLSENDLRGSLMFIERAVGIENARAIYEKEA-GESISQRELVRRLSADGYP 184 Pseudomonas syr...
ADI95370     139 REERFFRIHCLFRPW---Q--SESHALLGHLAESDLHGQLTFIERALAVAKLQEMFQYAH--THLTQRELATRLSEGGYP 211 Pseudomonas put...

WP_001029723 184 IHNSMISRMEHTVEYLYPFMPELLVSGLGKPQIVNLLNLRADALKIWQQYSVmtET--D--SDFNEIFGHVCTQFD-DPE 258 Salmonella ente...
WP_012105823 169 IHNSSISRMEDTLKYLYPCLPDLLDAGLSRSQVIPLITLRSAAEKMWSRHVV--AT--DcsKTFEAVFSAVCTSFN-CPD 243 Yersinia pseudo...
WP_011145390 181 ISQTSISQMHNTVQYLYPHMPNLLISGMGRPQAVNILSLRVDAQKTWNSFSS--EA--ScgKDFDSVFGEVCQRFD-NPE 255 Photorhabdus lu...
WP_029996167 183 VQQSHISRMADAVRYLLPAIPTVLYGGLGRHQVERLSVMRKACERTWEYYAK--GR--SlqLDFDNFFQEVLSQFDtQAD 258 Xanthomonas axo...
WP_011092140 181 IDNSSISRMDNTIAFLYPYIPNLLESGLGRSQIQSLLSLRHDAEKIWSEYVL--TVstE--LSFEDVFGGCCKKFD-SPD 255 Pectobacterium ...
WP_011817115 184 IHSSTISRMEDTLKHLYPVLPALLDSGLPRIQVLPLLTLRSTAEKTWKIFSS--EV--VpkKDFCDVFSDTCCIFN-HPD 258 Yersinia entero...
WP_011793741 184 VPQPHISRMRDAVQYLLPAIPSVLYAGMGRHQVERLSLLRRGAEQAWAQRAS--AD--A--IAFADLFQDVLSGFDvAPE 257 Acidovorax citr...
WP_011334392 179 ISQSHISRMLDTLEHLLPAIPQTLYAGVGKPQIERLISLRSQAERTWNRYST--A---S--VAFAEFWLETLAGFDaDPE 251 Pseudomonas flu...
WP_011267075 185 VSQSHISKMQDTVRSLLPVIPSALYSGLGKHQVERLLSLRKAAGQTWITHTE--GK--EhiPDFEGLFQDVLSLFDgDAS 260 Pseudomonas syr...
ADI95370     212 ISQSHISRMFDTLEHLLPAIPQMLYAGLGKSAIVRLISLRRRAESIWNRYFG--AP--E---QFPLLWFEVLSAFDgEKA 284 Pseudomonas put...

WP_001029723 259 VYSFEMFRDEFIGMLVNVLPhpsLNYDRWLLELDPK 294 Salmonella enterica
WP_012105823 244 LYSLDMFRDELIGELLKALPhplLNYDRWLIELDPK 279 Yersinia pseudotuberculosis
WP_011145390 256 LYSFDMLRDELIGELIKALPhpaLNYDRWLLELDPK 291 Photorhabdus luminescens
WP_029996167 259 EFAPQRVQDELIGQMSELLG---VNYDVLALDLTES 291 Xanthomonas axonopodis
WP_011092140 256 DWSLEMFRDEFIGDLVSALPhpsLNYDRWVMELDPK 291 Pectobacterium atrosepticum
WP_011817115 259 TYSLEMFRDELIGKLLKALPhpsLNYDRWLIELDPK 294 Yersinia enterocolitica
WP_011793741 258 EFSFDRVRDELIGQMAQVLG---ADYDVLALDIagl 290 Acidovorax citrulli
WP_011334392 252 SFNLERIQDELLERMSHLLG---QSYRMLALELSET 284 Pseudomonas fluorescens
WP_011267075 261 EFVYERVQDELISHMQSGTG---LSYEQLLLTLSEN 293 Pseudomonas syringae
ADI95370     285 DLDSSELQDELIAKMAVSLR---QTPRLLTLELHQE 317 Pseudomonas putida DOT-T1E
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap