3V2H


Conserved Protein Domain Family
PHB_DH

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TIGR01963: PHB_DH 
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3-hydroxybutyrate dehydrogenase
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Statistics
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PSSM-Id: 211705
Aligned: 11 rows
Threshold Bit Score: 358.991
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3V2H_A        25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGF--GapD--EIRTVTDEVAGLSSGTVLHHPADXTKPSEIADXXAXVAD 100 Sinorhizobium m...
O86034         2 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGF--GapD--EIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 77  Sinorhizobium m...
P42317         3 KQVALVTGAAGGIGFEIAREFAREGASVIVSDL--R--P--EACEKAASKLAEEGFDAAAIPYDVTKEAQVADTVNVIQK 76  Bacillus subtil...
WP_011067024   4 DRVVYITGAASGIGYQMGVEFLKQGAKVVFTDI--N--E--QKLNEITKDLSDLGYECTGLKVDVTNEEELKQSIQQTVR 77  Oceanobacillus ...
WP_010921213   9 GQVAIVTGSTSGIGHAMADALAAQGCNIVMNGL--G--EmnAIERARAEMAETHGVEVLYHGADMTRPIEIADMVRAAKA 84  Caulobacter vib...
EEH13232      22 RKTAIVTGSNSGIGLGIAHALAAAGHNVVINSFtdR--D--EDHALARMLAEEHGANVIYIAADMSKAEDCRNLIAKTVK 97  Brucella ceti s...
Q9X6U2         4 GKTALVTGSTSGIGLGIAKALAAQGANIIVNGF--G--D--ADAAKAEIAQAGQGIRVGYHGADMSKAAEIEDMMRYAQS 77  Ralstonia eutro...
WP_010973585   5 PKTVLVTGSTSGIGLAIAKRFAEAGFLVAVHGV--EtaA--EGAQALEAVATVARHRPVYFSANLAHYDESAHLPEKVIA 80  Agrobacterium f...
WP_011037308   1 MRSILITGAGSGIGAGLATVLAADGHHLLVSDA--D--L--AAAEQTTQQVRAAGGSAEALVLDVTDEHSIAQALAAAAR 74  Xanthomonas cam...
WP_011004348   6 GKVAVVTGAASGIGKQIALTLARAGAAIGIVDL--N--E--DGAQAAAKEITDAGGKAIGLRMDVTDEQAVDIGIDRVAA 79  Ralstonia solan...
WP_011027518  19 GRTALVTGAAGGIGRACALRLAAAGAEVRAVDR--D--A--AGLEALAGSCGDLAGSVEPQVLDLTDLD-------AAER 85  Streptomyces co...
3V2H_A       101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPXKKKGWG-RIINIASAHGLVASPFKSAYVAA 179 Sinorhizobium m...
O86034        78 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWG-RIINIASAHGLVASPFKSAYVAA 156 Sinorhizobium m...
P42317        77 QYGRLDILVNNAGIQHVAPIEEFPTDTFEQLIKVMLTAPFIAMKHVFPIMKKQQFG-RIINIASVNGLVGFAGKSAYNSA 155 Bacillus subtil...
WP_011067024  78 IYGSLDVLINNAGLQHVSPIEDFPTEKYEFMIKIMLTAPFVAIKHVLPIMKEQGHG-RILNMASINGLVGFAGKAAYNSA 156 Oceanobacillus ...
WP_010921213  85 EFGELDILVNNAGVQHVAPVEDFPEDKWDLIIAVNLSSAFHATKAAVPIMKEQGRG-RIVNIASAHGLVASPFKSAYVAA 163 Caulobacter vib...
EEH13232      98 VFGNSDILVNNAGIQHVAPVEEFPPEQWDRIIAINLTSAFHTSAAAIPHMRKAGWG-RIINIASAHGLVASPFKSAYVAA 176 Brucella ceti s...
Q9X6U2        78 DFGGADILVNNAGIQHVAAIEDFPPERWDAIIAINLTSAFHTTRLALPGMKQKDWG-RIINVASTHGLVASAQKSAYVAA 156 Ralstonia eutro...
WP_010973585  81 EFGHIDVLVNNAGIQKVAPIDEFDFADFSRIVAISLDSAFHTIHAALPGMKERGWG-RIVNIASAHGLRASPFKAPYVAT 159 Agrobacterium f...
WP_011037308  75 A---PEVLVNNAGLQHVAPLEEFPMQRWALLVDVMLTGAARLSRAVLPGMRAGGYG-RIVNIGSIHSLVASPYKSAYVAA 150 Xanthomonas cam...
WP_011004348  80 ELGSVDILVSNAGVQIVNPIESYAFADWKKMQAIHVDGAFLTTRAALRHMYKDKRGgVVIYMGSVHSHEGSPLKSAYVAA 159 Ralstonia solan...
WP_011027518  86 AAAGTDVLVNNAGLQLVRPLEEFPPDVFHTVLTVMLEAPFRLIRGALPHMYGQGWG-RIVNISSVHGLRASAYKAAYVSA 164 Streptomyces co...
3V2H_A       180 KHGIXGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVEQVASLALYL 259 Sinorhizobium m...
O86034       157 KHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYL 236 Sinorhizobium m...
P42317       156 KHGVIGLTKVGALEGAPHGITVNALCPGYVDTQLVRNQLSDLSKTRNVPYDSVLEQVIFPLVPQKRLLSVKEIADYAVFL 235 Bacillus subtil...
WP_011067024 157 KHGLIGLTKVAALEVADTGITVNAICPGYVDTPLVRGQFEDLAKTRNVPVERVKEEVLFPLVPQKRLLDVKEIADYALYL 236 Oceanobacillus ...
WP_010921213 164 KHGIMGLTKTVALEVAQHGITCNAICPGFVKTPLVEAQIADQAKARGISEEAVMRDVILASQPTKQFVTFDQLNGMLLYL 243 Caulobacter vib...
EEH13232     177 KHGIVGFTKTLALELATAKITANSICPGYVLTPLVEAQIPDQMKAHHMDRETVIRDVMLDKQPTKEFVTTAQIGAVATFL 256 Brucella ceti s...
Q9X6U2       157 KHGIVGFTKVTALETAQTGVTANAICPGWVLTPLVQKQVEARAQKEGIPVEQAKRELVLEKQPSGQFVTPDELGALAVFL 236 Ralstonia eutro...
WP_010973585 160 KHAVVGLTKSVALEVAEQGITCNAICPGYVWTPLVAAQVADQARVHGMSEDDVVKKVMLAPQPTRRFVQPEEVAEMALYL 239 Agrobacterium f...
WP_011037308 151 KHGLIGLSKVLALETADCDITANTLCPSYVRTPLVERQIADQARTRGIAEDAVIREVMLKPMPKGAFIEYDELAGTVAFL 230 Xanthomonas cam...
WP_011004348 160 KHALLGLSKVLAKEGAAHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEDVVKKVMLGGTVDGVFTTVEDVAETVRFL 239 Ralstonia solan...
WP_011027518 165 KHGLEGLSKTAALEGAAHGVTSNCVNPAYVRTPLVERQIADQARAHGLPEEQVLSDVLLRDSALRRLIEPDEVAEAVAYL 244 Streptomyces co...
3V2H_A       260 AGDDAAQITGTHVSXDGGWTAQ 281 Sinorhizobium meliloti 1021
O86034       237 AGDDAAQITGTHVSMDGGWTAQ 258 Sinorhizobium meliloti 1021
P42317       236 ASEKAKGVTGQAVVLDGGYTAQ 257 Bacillus subtilis subsp. subtilis str. 168
WP_011067024 237 ASDKAKGITGQALALDGGYTVQ 258 Oceanobacillus iheyensis
WP_010921213 244 VSDLGASANGAAYQIDGGWVAQ 265 Caulobacter vibrioides
EEH13232     257 ASDAAAQINGAAISVDGGWTAE 278 Brucella ceti str. Cudo
Q9X6U2       237 SSEAARQVRGAIWNMDGGWVAQ 258 Ralstonia eutropha H16
WP_010973585 240 AGDMARSITGTTISIDGGWTAK 261 Agrobacterium fabrum
WP_011037308 231 MSHAARNLTGQAIAIDGGWTAQ 252 Xanthomonas campestris
WP_011004348 240 ASFPSAALTGQSFVVSHGWFMQ 261 Ralstonia solanacearum
WP_011027518 245 CGPYTVGLTGTSLVLDGGWTAH 266 Streptomyces coelicolor
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